RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 ACTL9Q8TC94 416 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 DDIT4LQ96D03 193 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 ZNF799Q96GE5 643 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 NARS2Q96I59 477 aaKnown RBP3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 OR10C1Q96KK4 312 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 ZNF75AQ96N20 296 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 ZNF251Q9BRH9 671 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 TSGA10Q9BZW7 698 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 C12orf4Q9NQ89 552 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 ZNF331Q9NQX6 463 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 ANAPC11Q9NYG5 84 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 ANXA10Q9UJ72 324 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 LINC00527Q9UJ94 153 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 ENPP5Q9UJA9 477 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 RAB22AQ9UL26 194 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 ORC6Q9Y5N6 252 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 FAT3Q8TDW7 4589 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 hCG_1818297A0A087WSY0 165 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 A0A096LNJ9 63 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 A8MU10 97 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 VGLL3A8MV65 326 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 SOCS1O15524 211 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 SNAP29O95721 258 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 GYPAP02724 150 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 SERPINE1P05121 402 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 P0DMU3 169 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 FAM231AP0DMU4 169 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 FAM231CP0DMU5 169 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 MPIP34949 423 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 ZNF133P52736 654 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 SLC18A1P54219 525 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 H3F3AP84243 136 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 PITPNAQ00169 270 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 ZNF616Q08AN1 781 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 C1DQ13901 141 aaKnown RBP3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 C6orf99Q4VX62 202 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 C5orf47Q569G3 176 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 SLC16A13Q7RTY0 426 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 DRAM1Q8N682 238 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 OR5AK3PQ8NH89 298 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 C4orf3Q8WVX3 66 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 TNFRSF14Q92956 283 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 C20orf144Q9BQM9 153 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 TAPBPLQ9BX59 468 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 NXF2Q9GZY0 626 aaKnown RBP3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 URGCP-MRPS24S4R325 110 aa3.03□□□□□ -1.92
HMGB1P23-201ENST00000518743 IGHV7-4-1A0A0J9YVY3 117 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 C5orf49A4QMS7 147 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 C11orf94C9JXX5 98 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 CCRL2O00421 344 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 FABP7O15540 132 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 STK16O75716 305 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 KCNK2O95069 426 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 HLA-DQA1P01909 254 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 KRTAP1-4P0C5Y4 121 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 FKBP2P26885 142 aaKnown RBP3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 KDELR2P33947 212 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 HAMPP81172 84 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 TSNQ15631 228 aaKnown RBP3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 TMEM236Q5W0B7 351 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 NANOGP8Q6NSW7 305 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 EPGNQ6UW88 154 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 PLEKHG7Q6ZR37 379 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 SAXO1Q8IYX7 474 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 OR5AS1Q8N127 324 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 OR1L1Q8NH94 360 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 CYYR1Q96J86 154 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 KCNS1Q96KK3 526 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 CHCHD7Q9BUK0 85 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 SRRQ9GZT4 340 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 OR52D1Q9H346 318 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 ACER3Q9NUN7 267 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 CYB5R1Q9UHQ9 305 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 PRO0628Q9UI54 55 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 PSG11Q9UQ72 335 aa3.02□□□□□ -1.93
HMGB1P23-201ENST00000518743 TRAV38-1A0A0B4J264 116 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 NDUFC2-KCTD14E9PQ53 114 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 F5H5P2 479 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 M0R1W7 72 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 M0R1X1 148 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 UPK1AO00322 258 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 SULT1C2O00338 296 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 TOR1AO14656 332 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 BET1O15155 118 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 SGCEO43556 437 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 SNAI2O43623 268 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 NDUFA2O43678 99 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 NDUFS5O43920 106 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 PLIN3O60664 434 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 E2F6O75461 281 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 MED6O75586 246 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 ZNF189O75820 626 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 IFNA21P01568 189 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 IFNA17P01571 189 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 TLX1NBP0CAT3 122 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 HLA-GP17693 338 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 CD164Q04900 197 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 TRAM1Q15629 374 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 DEFB116Q30KQ4 102 aa3.01□□□□□ -1.93
HMGB1P23-201ENST00000518743 C8orf74Q6P047 294 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms