RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 RPEL1Q2QD12 228 aa14.32□□□□□ -0.12
FAM49B-208ENST00000518344 H2BFWTQ7Z2G1 175 aa14.32□□□□□ -0.12
FAM49B-208ENST00000518344 CADM3Q8N126 398 aa14.32□□□□□ -0.12
FAM49B-208ENST00000518344 CCDC71LQ8N9Z2 235 aa14.32□□□□□ -0.12
FAM49B-208ENST00000518344 MRGPRFQ96AM1 343 aa14.32□□□□□ -0.12
FAM49B-208ENST00000518344 PRR25Q96S07 402 aa14.32□□□□□ -0.12
FAM49B-208ENST00000518344 SRSF8Q9BRL6 282 aaKnown RBP14.32□□□□□ -0.12
FAM49B-208ENST00000518344 PRNDQ9UKY0 176 aa14.32□□□□□ -0.12
FAM49B-208ENST00000518344 C3orf85A0A1B0GTC6 90 aa14.31□□□□□ -0.12
FAM49B-208ENST00000518344 ANKRD20A5PA0PJZ0 165 aa14.31□□□□□ -0.12
FAM49B-208ENST00000518344 ZNF701M0R085 212 aaPredicted RBP14.31□□□□□ -0.12
FAM49B-208ENST00000518344 LY86O95711 162 aa14.31□□□□□ -0.12
FAM49B-208ENST00000518344 IGHV3-23P01764 117 aa14.31□□□□□ -0.12
FAM49B-208ENST00000518344 CTSDP07339 412 aaPredicted RBP14.31□□□□□ -0.12
FAM49B-208ENST00000518344 OR13C7P0DN81 318 aa14.31□□□□□ -0.12
FAM49B-208ENST00000518344 HIST1H1BP16401 226 aaKnown RBP14.31□□□□□ -0.12
FAM49B-208ENST00000518344 PTBP1P26599 531 aaKnown RBP eCLIP14.31□□□□□ -0.122e-14■■■■■ 31.6
FAM49B-208ENST00000518344 SYNJ2BPP57105 145 aa14.31□□□□□ -0.12
FAM49B-208ENST00000518344 TATDN3Q17R31 274 aa14.31□□□□□ -0.12
FAM49B-208ENST00000518344 PYDC2Q56P42 97 aa14.31□□□□□ -0.12
FAM49B-208ENST00000518344 OR4A16Q8NH70 328 aa14.31□□□□□ -0.12
FAM49B-208ENST00000518344 SEC22AQ96IW7 307 aa14.31□□□□□ -0.12
FAM49B-208ENST00000518344 TP53RKQ96S44 253 aa14.31□□□□□ -0.12
FAM49B-208ENST00000518344 TSC22D3Q99576 134 aa14.31□□□□□ -0.12
FAM49B-208ENST00000518344 THAP7Q9BT49 309 aaPredicted RBP14.31□□□□□ -0.12
FAM49B-208ENST00000518344 NDUFA4L2Q9NRX3 87 aa14.31□□□□□ -0.12
FAM49B-208ENST00000518344 FKBP11Q9NYL4 201 aa14.31□□□□□ -0.12
FAM49B-208ENST00000518344 C14orf166Q9Y224 244 aaKnown RBP14.31□□□□□ -0.12
FAM49B-208ENST00000518344 S4R3C0 116 aa14.31□□□□□ -0.12
FAM49B-208ENST00000518344 TNCP24821 2201 aa14.3□□□□□ -0.12
FAM49B-208ENST00000518344 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.3□□□□□ -0.12
FAM49B-208ENST00000518344 H0Y980 276 aa14.3□□□□□ -0.12
FAM49B-208ENST00000518344 SP6Q3SY56 376 aa14.3□□□□□ -0.12
FAM49B-208ENST00000518344 THOC7Q6I9Y2 204 aaKnown RBP14.3□□□□□ -0.12
FAM49B-208ENST00000518344 OR51S1Q8NGJ8 323 aa14.3□□□□□ -0.12
FAM49B-208ENST00000518344 ZNF256Q9Y2P7 627 aaPredicted RBP14.3□□□□□ -0.12
FAM49B-208ENST00000518344 IGLV11-55A0A075B6I3 123 aa14.29□□□□□ -0.12
FAM49B-208ENST00000518344 DBX1A6NMT0 343 aa14.29□□□□□ -0.12
FAM49B-208ENST00000518344 PPP5D1E7EU14 171 aa14.29□□□□□ -0.12
FAM49B-208ENST00000518344 BMPR1BO00238 502 aa14.29□□□□□ -0.12
FAM49B-208ENST00000518344 MECP2P51608 486 aaKnown RBP14.29□□□□□ -0.12
FAM49B-208ENST00000518344 WT1-ASQ06250 92 aa14.29□□□□□ -0.12
FAM49B-208ENST00000518344 TRIM16LQ309B1 348 aa14.29□□□□□ -0.12
FAM49B-208ENST00000518344 HSD17B13Q7Z5P4 300 aaPredicted RBP14.29□□□□□ -0.12
FAM49B-208ENST00000518344 OR9G4Q8NGQ1 327 aa14.29□□□□□ -0.12
FAM49B-208ENST00000518344 LSM10Q969L4 123 aaKnown RBP14.29□□□□□ -0.12
FAM49B-208ENST00000518344 PRRT1Q99946 306 aa14.29□□□□□ -0.12
FAM49B-208ENST00000518344 MCUBQ9NWR8 336 aa14.29□□□□□ -0.12
FAM49B-208ENST00000518344 C15orf61A6NNL5 157 aa14.28□□□□□ -0.12
FAM49B-208ENST00000518344 CYB5BO43169 146 aa14.28□□□□□ -0.12
FAM49B-208ENST00000518344 SLC25A24Q6NUK1 477 aa14.28□□□□□ -0.12
FAM49B-208ENST00000518344 CLEC19AQ6UXS0 136 aa14.28□□□□□ -0.12
FAM49B-208ENST00000518344 HAPLN4Q86UW8 402 aa14.28□□□□□ -0.12
FAM49B-208ENST00000518344 OR6Q1Q8NGQ2 317 aa14.28□□□□□ -0.12
FAM49B-208ENST00000518344 EEF1AKMT3Q96AZ1 226 aa14.28□□□□□ -0.12
FAM49B-208ENST00000518344 TMEM56Q96MV1 263 aa14.28□□□□□ -0.12
FAM49B-208ENST00000518344 RTBDNQ9BSG5 229 aaPredicted RBP14.28□□□□□ -0.12
FAM49B-208ENST00000518344 TMEM14BQ9NUH8 114 aa14.28□□□□□ -0.12
FAM49B-208ENST00000518344 TEX13DA0A0J9YY54 714 aaPredicted RBP14.27□□□□□ -0.13
FAM49B-208ENST00000518344 HLA-AP01891 365 aaKnown RBP14.27□□□□□ -0.13
FAM49B-208ENST00000518344 SPNP16150 400 aa14.27□□□□□ -0.13
FAM49B-208ENST00000518344 AKR1C2P52895 323 aa14.27□□□□□ -0.13
FAM49B-208ENST00000518344 SURF2Q15527 256 aaPredicted RBP14.27□□□□□ -0.13
FAM49B-208ENST00000518344 IZUMO4Q1ZYL8 232 aa14.27□□□□□ -0.13
FAM49B-208ENST00000518344 KLK9Q2XQG4 91 aa14.27□□□□□ -0.13
FAM49B-208ENST00000518344 FAM209BQ5JX69 171 aa14.27□□□□□ -0.13
FAM49B-208ENST00000518344 Q8N402 240 aa14.27□□□□□ -0.13
FAM49B-208ENST00000518344 GDPD1Q8N9F7 314 aa14.27□□□□□ -0.13
FAM49B-208ENST00000518344 OR5B3Q8NH48 314 aa14.27□□□□□ -0.13
FAM49B-208ENST00000518344 C5orf66Q9H5L9 145 aa14.27□□□□□ -0.13
FAM49B-208ENST00000518344 THYN1Q9P016 225 aa14.27□□□□□ -0.13
FAM49B-208ENST00000518344 SCP2D1Q9UJQ7 156 aa14.27□□□□□ -0.13
FAM49B-208ENST00000518344 KLK9Q9UKQ9 250 aa14.27□□□□□ -0.13
FAM49B-208ENST00000518344 GPR132Q9UNW8 380 aa14.27□□□□□ -0.13
FAM49B-208ENST00000518344 DMRT1Q9Y5R6 373 aa14.27□□□□□ -0.13
FAM49B-208ENST00000518344 V9GYH0 126 aa14.27□□□□□ -0.13
FAM49B-208ENST00000518344 MFSD2BA6NFX1 497 aa14.26□□□□□ -0.13
FAM49B-208ENST00000518344 GGCTO75223 188 aaKnown RBP14.26□□□□□ -0.13
FAM49B-208ENST00000518344 ATG12O94817 140 aa14.26□□□□□ -0.13
FAM49B-208ENST00000518344 OR2C1O95371 312 aa14.26□□□□□ -0.13
FAM49B-208ENST00000518344 IGKV1-5P01602 117 aa14.26□□□□□ -0.13
FAM49B-208ENST00000518344 CCDC190Q86UF4 302 aa14.26□□□□□ -0.13
FAM49B-208ENST00000518344 CXorf58Q96LI9 332 aa14.26□□□□□ -0.13
FAM49B-208ENST00000518344 CCDC140Q96MF4 163 aa14.26□□□□□ -0.13
FAM49B-208ENST00000518344 NAA60Q9H7X0 242 aa14.26□□□□□ -0.13
FAM49B-208ENST00000518344 B3GALNT1O75752 331 aa14.25□□□□□ -0.13
FAM49B-208ENST00000518344 OR5AC1P0C628 307 aa14.25□□□□□ -0.13
FAM49B-208ENST00000518344 UCP1P25874 307 aa14.25□□□□□ -0.13
FAM49B-208ENST00000518344 ARL3P36405 182 aa14.25□□□□□ -0.13
FAM49B-208ENST00000518344 DCTN2Q13561 401 aaKnown RBP14.25□□□□□ -0.13
FAM49B-208ENST00000518344 IL34Q6ZMJ4 242 aa14.25□□□□□ -0.13
FAM49B-208ENST00000518344 RNASE11Q8TAA1 199 aaKnown RBP14.25□□□□□ -0.13
FAM49B-208ENST00000518344 RRNAD1Q96FB5 475 aaKnown RBP14.25□□□□□ -0.13
FAM49B-208ENST00000518344 ZC4H2Q9NQZ6 224 aa14.25□□□□□ -0.13
FAM49B-208ENST00000518344 SLC2A8Q9NY64 477 aa14.25□□□□□ -0.13
FAM49B-208ENST00000518344 PEMTQ9UBM1 199 aa14.25□□□□□ -0.13
FAM49B-208ENST00000518344 F11RQ9Y624 299 aaKnown RBP14.25□□□□□ -0.13
FAM49B-208ENST00000518344 TRBV7-1A0A0A6YYK4 115 aa14.24□□□□□ -0.13
FAM49B-208ENST00000518344 CLEC3BP05452 202 aa14.24□□□□□ -0.13
FAM49B-208ENST00000518344 CSN3P07498 182 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms