RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 FAM106AQ4KMX7 169 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 SNAI2O43623 268 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 CD5P06127 495 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 LOXL3P58215 753 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 RPS20P60866 119 aaKnown RBP10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 HIST1H1AQ02539 215 aaPredicted RBP10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 TBR1Q16650 682 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 OR4D5Q8NGN0 318 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 ORAOV1Q8WV07 137 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 C19orf24Q9BVV8 132 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 HIGD1AQ9Y241 93 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 SPTBN2O15020 2390 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 SCN3AQ9NY46 2000 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 PF4V1P10720 104 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 LGALS3P17931 250 aaKnown RBP10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 FOXA3P55318 350 aaPredicted RBP10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 RPL23P62829 140 aaKnown RBP10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 IZUMO4Q1ZYL8 232 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 NUP37Q8NFH4 326 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 OR10W1Q8NGF6 305 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 TMEM186Q96B77 213 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 CLEC7AQ9BXN2 247 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 IDI2-AS1Q9NZ38 188 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 OR51B2Q9Y5P1 312 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 TRAV8-6A0A0B4J262 113 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 UNC119Q13432 240 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 RBPMS2Q6ZRY4 209 aaKnown RBP10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 FAM19A2Q8N3H0 131 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 FGFRL1Q8N441 504 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 NEU1Q99519 415 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 SLX1AQ9BQ83 275 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 CYSLTR1Q9Y271 337 aa10.41□□□□□ -0.74
PCDHGA6-201ENST00000517434 TRAV30A0A087WSZ9 112 aa10.4□□□□□ -0.74
PCDHGA6-201ENST00000517434 TRAV39A0A0B4J263 110 aa10.4□□□□□ -0.74
PCDHGA6-201ENST00000517434 IGHV3-13P01766 116 aa10.4□□□□□ -0.74
PCDHGA6-201ENST00000517434 IGHV3-7P01780 117 aa10.4□□□□□ -0.74
PCDHGA6-201ENST00000517434 TMEM54Q969K7 222 aa10.4□□□□□ -0.74
PCDHGA6-201ENST00000517434 SLC25A28Q96A46 364 aa10.4□□□□□ -0.74
PCDHGA6-201ENST00000517434 TMEM242Q9NWH2 141 aa10.4□□□□□ -0.74
PCDHGA6-201ENST00000517434 ODAMA1E959 279 aa10.4□□□□□ -0.74
PCDHGA6-201ENST00000517434 TMEM14DPA8MWL7 114 aa10.4□□□□□ -0.74
PCDHGA6-201ENST00000517434 GCHFRP30047 84 aa10.4□□□□□ -0.74
PCDHGA6-201ENST00000517434 GFI1BQ5VTD9 330 aa10.4□□□□□ -0.74
PCDHGA6-201ENST00000517434 AMELYQ99218 206 aa10.4□□□□□ -0.74
PCDHGA6-201ENST00000517434 TCF23Q7RTU1 214 aa10.4□□□□□ -0.74
PCDHGA6-201ENST00000517434 SRXN1Q9BYN0 137 aa10.4□□□□□ -0.74
PCDHGA6-201ENST00000517434 IGLV1-36A0A0B4J1U3 117 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 TYMSP04818 313 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 ICAM4Q14773 271 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 TRAV8-2A0A0B4J237 113 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 PF4P02776 101 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 TPTE2P1Q5T6R2 138 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 SSBP3Q9BWW4 388 aaPredicted RBP10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 RABAC1Q9UI14 185 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 HILPDAQ9Y5L2 63 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 UMODP07911 640 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 COPS9Q8WXC6 57 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 SRSF12Q8WXF0 261 aaKnown RBP10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 ST20Q9HBF5 79 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 ABCA7Q8IZY2 2146 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 CEP250Q9BV73 2442 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 CENPVL1A0A0U1RR11 272 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 WNT9BO14905 357 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 SCTP09683 121 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 C20orf204Q6ZNR8 217 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 DCTN5Q9BTE1 182 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 WNT5BQ9H1J7 359 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 JPT1Q9UK76 154 aa10.39□□□□□ -0.75
PCDHGA6-201ENST00000517434 RAB9AP51151 201 aa10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 TM4SF20Q53R12 229 aa10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 LY6G6FQ5SQ64 297 aa10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 EBLN2Q6P2I7 272 aa10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 RNF126Q9BV68 326 aa10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 TDGF1P3P51864 188 aa10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 SLC25A53Q5H9E4 307 aa10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 UNQ5815/PRO19632Q6UWF5 114 aa10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 C17orf82Q86X59 251 aaPredicted RBP10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 FADS6Q8N9I5 356 aa10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 CALYQ9NYX4 217 aa10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 ITGB1BP1O14713 200 aa10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 FAM27E3Q08E93 113 aa10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 YAE1D1Q9NRH1 226 aa10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 BEX4Q9NWD9 120 aaPredicted RBP10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 CACNA1DQ01668 2161 aa10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 CEACAM18A8MTB9 384 aa10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 RTN4RL2Q86UN3 420 aa10.38□□□□□ -0.75
PCDHGA6-201ENST00000517434 SMAD7O15105 426 aaKnown RBP10.37□□□□□ -0.75
PCDHGA6-201ENST00000517434 TIMP3P35625 211 aa10.37□□□□□ -0.75
PCDHGA6-201ENST00000517434 GAGE2BQ13066 116 aa10.37□□□□□ -0.75
PCDHGA6-201ENST00000517434 GAGE2EQ4V326 116 aa10.37□□□□□ -0.75
PCDHGA6-201ENST00000517434 FAM90A1Q86YD7 464 aa10.37□□□□□ -0.75
PCDHGA6-201ENST00000517434 SSBP4Q9BWG4 385 aaPredicted RBP10.37□□□□□ -0.75
PCDHGA6-201ENST00000517434 RTN4RQ9BZR6 473 aa10.37□□□□□ -0.75
PCDHGA6-201ENST00000517434 GAGE2DQ9UEU5 116 aa10.37□□□□□ -0.75
PCDHGA6-201ENST00000517434 INTS1Q8N201 2190 aaKnown RBP10.37□□□□□ -0.75
PCDHGA6-201ENST00000517434 SSTR5P35346 364 aa10.37□□□□□ -0.75
PCDHGA6-201ENST00000517434 ATP5IP56385 69 aaPredicted RBP10.37□□□□□ -0.75
PCDHGA6-201ENST00000517434 CENPVQ7Z7K6 275 aaPredicted RBP10.37□□□□□ -0.75
PCDHGA6-201ENST00000517434 TDRD6O60522 2096 aaKnown RBP10.37□□□□□ -0.75
PCDHGA6-201ENST00000517434 OR2H2O95918 312 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms