RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 NOL3O60936 208 aaKnown RBP8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 RAB3DO95716 219 aa8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 IGHV3-23P01764 117 aa8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 TRAPPC2P0DI81 140 aa8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 TRAPPC2BP0DI82 140 aa8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 DEFA4P12838 97 aa8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 PGAM2P15259 253 aa8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 WT1-ASQ06250 92 aa8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 TATDN3Q17R31 274 aa8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 FAM209BQ5JX69 171 aa8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 STEAP1BQ6NZ63 245 aa8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 TERB2Q8NHR7 220 aa8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 MRGPRFQ96AM1 343 aa8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 SOSTQ9BQB4 213 aa8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 C6orf62Q9GZU0 229 aaPredicted RBP8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 SIGLEC8Q9NYZ4 499 aa8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 RABL2AQ9UBK7 228 aaPredicted RBP8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 RABL2BQ9UNT1 228 aa8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 S4R3C0 116 aa8.85□□□□□ -0.99
SH3RF1-205ENST00000511421 COL7A1Q02388 2944 aa8.84□□□□□ -0.99
SH3RF1-205ENST00000511421 SNAPC5O75971 98 aa8.84□□□□□ -0.99
SH3RF1-205ENST00000511421 HLA-AP01891 365 aaKnown RBP8.84□□□□□ -0.99
SH3RF1-205ENST00000511421 OR13C7P0DN81 318 aa8.84□□□□□ -0.99
SH3RF1-205ENST00000511421 PPP5CP53041 499 aa8.84□□□□□ -0.99
SH3RF1-205ENST00000511421 PIGPP57054 158 aa8.84□□□□□ -0.99
SH3RF1-205ENST00000511421 IL18Q14116 193 aa8.84□□□□□ -0.99
SH3RF1-205ENST00000511421 C11orf87Q6NUJ2 197 aa8.84□□□□□ -0.99
SH3RF1-205ENST00000511421 TMEM14BQ9NUH8 114 aa8.84□□□□□ -0.99
SH3RF1-205ENST00000511421 PRNDQ9UKY0 176 aa8.84□□□□□ -0.99
SH3RF1-205ENST00000511421 OR51B2Q9Y5P1 312 aa8.84□□□□□ -0.99
SH3RF1-205ENST00000511421 SMAD5-AS1Q9Y6J3 95 aa8.84□□□□□ -0.99
SH3RF1-205ENST00000511421 MFSD2BA6NFX1 497 aa8.83□□□□□ -1
SH3RF1-205ENST00000511421 C15orf61A6NNL5 157 aa8.83□□□□□ -1
SH3RF1-205ENST00000511421 GGCTO75223 188 aaKnown RBP8.83□□□□□ -1
SH3RF1-205ENST00000511421 OR2C1O95371 312 aa8.83□□□□□ -1
SH3RF1-205ENST00000511421 SERPINE2P07093 398 aa8.83□□□□□ -1
SH3RF1-205ENST00000511421 TNFSF8P32971 234 aa8.83□□□□□ -1
SH3RF1-205ENST00000511421 MECP2P51608 486 aaKnown RBP8.83□□□□□ -1
SH3RF1-205ENST00000511421 FAAP20Q6NZ36 180 aa8.83□□□□□ -1
SH3RF1-205ENST00000511421 CLEC19AQ6UXS0 136 aa8.83□□□□□ -1
SH3RF1-205ENST00000511421 ADAMTSL5Q6ZMM2 481 aa8.83□□□□□ -1
SH3RF1-205ENST00000511421 HSD17B13Q7Z5P4 300 aaPredicted RBP8.83□□□□□ -1
SH3RF1-205ENST00000511421 GDPD1Q8N9F7 314 aa8.83□□□□□ -1
SH3RF1-205ENST00000511421 OR13C8Q8NGS7 320 aa8.83□□□□□ -1
SH3RF1-205ENST00000511421 OR5B3Q8NH48 314 aa8.83□□□□□ -1
SH3RF1-205ENST00000511421 LSM10Q969L4 123 aaKnown RBP8.83□□□□□ -1
SH3RF1-205ENST00000511421 EEF1AKMT3Q96AZ1 226 aa8.83□□□□□ -1
SH3RF1-205ENST00000511421 TP53RKQ96S44 253 aa8.83□□□□□ -1
SH3RF1-205ENST00000511421 TSC22D3Q99576 134 aa8.83□□□□□ -1
SH3RF1-205ENST00000511421 FKBP11Q9NYL4 201 aa8.83□□□□□ -1
SH3RF1-205ENST00000511421 H0Y980 276 aa8.82□□□□□ -1
SH3RF1-205ENST00000511421 GSTZ1O43708 216 aaPredicted RBP8.82□□□□□ -1
SH3RF1-205ENST00000511421 MFAP2P55001 183 aa8.82□□□□□ -1
SH3RF1-205ENST00000511421 MEF2DQ14814 521 aa8.82□□□□□ -1
SH3RF1-205ENST00000511421 SCGB2B2Q4G0G5 96 aa8.82□□□□□ -1
SH3RF1-205ENST00000511421 H2BFWTQ7Z2G1 175 aa8.82□□□□□ -1
SH3RF1-205ENST00000511421 GPHB5Q86YW7 130 aa8.82□□□□□ -1
SH3RF1-205ENST00000511421 OR4C16Q8NGL9 310 aa8.82□□□□□ -1
SH3RF1-205ENST00000511421 MCFD2Q8NI22 146 aa8.82□□□□□ -1
SH3RF1-205ENST00000511421 ZNF502Q8TBZ5 544 aa8.82□□□□□ -1
SH3RF1-205ENST00000511421 ZFAND1Q8TCF1 268 aa8.82□□□□□ -1
SH3RF1-205ENST00000511421 MARCH1Q8TCQ1 289 aa8.82□□□□□ -1
SH3RF1-205ENST00000511421 CXorf58Q96LI9 332 aa8.82□□□□□ -1
SH3RF1-205ENST00000511421 HINT2Q9BX68 163 aa8.82□□□□□ -1
SH3RF1-205ENST00000511421 RBM38Q9H0Z9 239 aaKnown RBP8.82□□□□□ -1
SH3RF1-205ENST00000511421 PEMTQ9UBM1 199 aa8.82□□□□□ -1
SH3RF1-205ENST00000511421 TRBV7-1A0A0A6YYK4 115 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 C3orf85A0A1B0GTC6 90 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 LGALS9O00182 355 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 IGKV1-5P01602 117 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 CLEC3BP05452 202 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 CTSDP07339 412 aaPredicted RBP8.81□□□□□ -1
SH3RF1-205ENST00000511421 P0C879 139 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 AKAIN1P0CW23 69 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 ARL3P36405 182 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 Q8N1Y9 231 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 COPZ2Q9P299 210 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 RSL24D1Q9UHA3 163 aaKnown RBP8.81□□□□□ -1
SH3RF1-205ENST00000511421 F11RQ9Y624 299 aaKnown RBP8.81□□□□□ -1
SH3RF1-205ENST00000511421 ANKRD20A5PA0PJZ0 165 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 FABP12A6NFH5 140 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 DISC1C4P0D8 188 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 NHLRC4P0CG21 123 aaPredicted RBP8.81□□□□□ -1
SH3RF1-205ENST00000511421 IZUMO4Q1ZYL8 232 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 SLC25A24Q6NUK1 477 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 CCDC71LQ8N9Z2 235 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 OR4A16Q8NH70 328 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 VN1R17PQ8TDU5 208 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 TMEM56Q96MV1 263 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 RTBDNQ9BSG5 229 aaPredicted RBP8.81□□□□□ -1
SH3RF1-205ENST00000511421 THAP7Q9BT49 309 aaPredicted RBP8.81□□□□□ -1
SH3RF1-205ENST00000511421 THYN1Q9P016 225 aa8.81□□□□□ -1
SH3RF1-205ENST00000511421 HUWE1Q7Z6Z7 4374 aaKnown RBP8.8□□□□□ -1
SH3RF1-205ENST00000511421 IZUMO1RA6ND01 250 aa8.8□□□□□ -1
SH3RF1-205ENST00000511421 C2orf70A6NJV1 201 aa8.8□□□□□ -1
SH3RF1-205ENST00000511421 EDN2P20800 178 aa8.8□□□□□ -1
SH3RF1-205ENST00000511421 UCP1P25874 307 aa8.8□□□□□ -1
SH3RF1-205ENST00000511421 HSPE1P61604 102 aaKnown RBP8.8□□□□□ -1
SH3RF1-205ENST00000511421 SURF2Q15527 256 aaPredicted RBP8.8□□□□□ -1
SH3RF1-205ENST00000511421 SP6Q3SY56 376 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms