RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 COPZ2Q9P299 210 aa7.18□□□□□ -1.26
DDX41-209ENST00000508279 IGHV3-21A0A0B4J1V1 117 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 IGLC7A0M8Q6 106 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 MFSD2BA6NFX1 497 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 OR2C1O95371 312 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 CRYGCP07315 174 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 HIST1H1BP16401 226 aaKnown RBP7.17□□□□□ -1.26
DDX41-209ENST00000508279 TBPP20226 339 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 ARL3P36405 182 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 MRPS10P82664 201 aaKnown RBP7.17□□□□□ -1.26
DDX41-209ENST00000508279 TRIM16LQ309B1 348 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 LHFPL1Q86WI0 220 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 ARRDC1Q8N5I2 433 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 OR13C8Q8NGS7 320 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 OR4A16Q8NH70 328 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 RNASE11Q8TAA1 199 aaKnown RBP7.17□□□□□ -1.26
DDX41-209ENST00000508279 ZFAND1Q8TCF1 268 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 MARCH1Q8TCQ1 289 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 B9D2Q9BPU9 175 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 PEMTQ9UBM1 199 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 PRNDQ9UKY0 176 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 LSM4Q9Y4Z0 139 aaKnown RBP7.17□□□□□ -1.26
DDX41-209ENST00000508279 SELENOKQ9Y6D0 94 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 SMAD5-AS1Q9Y6J3 95 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 CEPT1Q9Y6K0 416 aa7.17□□□□□ -1.26
DDX41-209ENST00000508279 IGLV11-55A0A075B6I3 123 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 IGHV3-35A0A0C4DH35 117 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 C3orf85A0A1B0GTC6 90 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 ZNF320A2RRD8 509 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 FABP12A6NFH5 140 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 DBX1A6NMT0 343 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 DISC1C4P0D8 188 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 CYB5BO43169 146 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 GGCTO75223 188 aaKnown RBP7.16□□□□□ -1.26
DDX41-209ENST00000508279 TPPPO94811 219 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 IGKV1-39P01597 117 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 CD74P04233 296 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 IGKV1D-39P04432 117 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 CSN3P07498 182 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 AKAIN1P0CW23 69 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 TNFSF8P32971 234 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 AKR1C2P52895 323 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 WT1-ASQ06250 92 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 MEF2DQ14814 521 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 IZUMO4Q1ZYL8 232 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 SP6Q3SY56 376 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 SPINK9Q5DT21 86 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 CCDC71LQ8N9Z2 235 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 OR4C16Q8NGL9 310 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 TERB2Q8NHR7 220 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 DYNLRB2Q8TF09 96 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 SMIM4Q8WVI0 70 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 LSM10Q969L4 123 aaKnown RBP7.16□□□□□ -1.26
DDX41-209ENST00000508279 ZNF486Q96H40 463 aaPredicted RBP7.16□□□□□ -1.26
DDX41-209ENST00000508279 SEC22AQ96IW7 307 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 CCDC140Q96MF4 163 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 TMEM56Q96MV1 263 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 TP53RKQ96S44 253 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 TSC22D3Q99576 134 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 SLIRPQ9GZT3 109 aaKnown RBP7.16□□□□□ -1.26
DDX41-209ENST00000508279 FKBP11Q9NYL4 201 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 THYN1Q9P016 225 aa7.16□□□□□ -1.26
DDX41-209ENST00000508279 C14orf166Q9Y224 244 aaKnown RBP7.16□□□□□ -1.26
DDX41-209ENST00000508279 TEX13DA0A0J9YY54 714 aaPredicted RBP7.15□□□□□ -1.26
DDX41-209ENST00000508279 C15orf61A6NNL5 157 aa7.15□□□□□ -1.26
DDX41-209ENST00000508279 H0Y980 276 aa7.15□□□□□ -1.26
DDX41-209ENST00000508279 IGLV1-51P01701 117 aa7.15□□□□□ -1.26
DDX41-209ENST00000508279 CLEC3BP05452 202 aa7.15□□□□□ -1.26
DDX41-209ENST00000508279 EDN2P20800 178 aa7.15□□□□□ -1.26
DDX41-209ENST00000508279 GPR183P32249 361 aa7.15□□□□□ -1.26
DDX41-209ENST00000508279 RND3P61587 244 aa7.15□□□□□ -1.26
DDX41-209ENST00000508279 SSBP1Q04837 148 aaKnown RBP7.15□□□□□ -1.26
DDX41-209ENST00000508279 PYDC2Q56P42 97 aa7.15□□□□□ -1.26
DDX41-209ENST00000508279 FAM209BQ5JX69 171 aa7.15□□□□□ -1.26
DDX41-209ENST00000508279 THOC7Q6I9Y2 204 aaKnown RBP7.15□□□□□ -1.26
DDX41-209ENST00000508279 IL34Q6ZMJ4 242 aa7.15□□□□□ -1.26
DDX41-209ENST00000508279 GDPD1Q8N9F7 314 aa7.15□□□□□ -1.26
DDX41-209ENST00000508279 UBAC2Q8NBM4 344 aa7.15□□□□□ -1.26
DDX41-209ENST00000508279 CXorf58Q96LI9 332 aa7.15□□□□□ -1.26
DDX41-209ENST00000508279 SRSF8Q9BRL6 282 aaKnown RBP7.15□□□□□ -1.26
DDX41-209ENST00000508279 NDUFA4L2Q9NRX3 87 aa7.15□□□□□ -1.26
DDX41-209ENST00000508279 MCUBQ9NWR8 336 aa7.15□□□□□ -1.26
DDX41-209ENST00000508279 RABL2AQ9UBK7 228 aaPredicted RBP7.15□□□□□ -1.26
DDX41-209ENST00000508279 RSL24D1Q9UHA3 163 aaKnown RBP7.15□□□□□ -1.26
DDX41-209ENST00000508279 RABL2BQ9UNT1 228 aa7.15□□□□□ -1.26
DDX41-209ENST00000508279 COL7A1Q02388 2944 aa7.14□□□□□ -1.27
DDX41-209ENST00000508279 TRBV7-1A0A0A6YYK4 115 aa7.14□□□□□ -1.27
DDX41-209ENST00000508279 IZUMO1RA6ND01 250 aa7.14□□□□□ -1.27
DDX41-209ENST00000508279 OR2T8A6NH00 312 aa7.14□□□□□ -1.27
DDX41-209ENST00000508279 CTDSPLO15194 276 aa7.14□□□□□ -1.27
DDX41-209ENST00000508279 CTSDP07339 412 aaPredicted RBP7.14□□□□□ -1.27
DDX41-209ENST00000508279 PTBP1P26599 531 aaKnown RBP eCLIP7.14□□□□□ -1.27
DDX41-209ENST00000508279 S100A5P33763 92 aa7.14□□□□□ -1.27
DDX41-209ENST00000508279 FAM106AQ4KMX7 169 aa7.14□□□□□ -1.27
DDX41-209ENST00000508279 LCN12Q6JVE5 192 aa7.14□□□□□ -1.27
DDX41-209ENST00000508279 PLET1Q6UQ28 207 aa7.14□□□□□ -1.27
DDX41-209ENST00000508279 HSD17B13Q7Z5P4 300 aaPredicted RBP7.14□□□□□ -1.27
DDX41-209ENST00000508279 OR51S1Q8NGJ8 323 aa7.14□□□□□ -1.27
DDX41-209ENST00000508279 OR5B3Q8NH48 314 aa7.14□□□□□ -1.27
DDX41-209ENST00000508279 CACNG8Q8WXS5 425 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms