RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 TCL1AP56279 114 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 TPI1P60174 286 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 NAA20P61599 178 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 HIST1H4AP62805 103 aaKnown RBP0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 IMPG1Q17R60 797 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 Q1T7F1 81 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 ACSM3Q53FZ2 586 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 C8orf74Q6P047 294 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 C7orf65Q6ZTY9 151 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 ZNF550Q7Z398 422 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 DCXRQ7Z4W1 244 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 UMODL1-AS1Q8N2C9 162 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 TBC1D19Q8N5T2 526 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 OR51D1Q8NGF3 324 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 OR2T27Q8NH04 317 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 RAB2BQ8WUD1 216 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 MBD3L1Q8WWY6 194 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 ACOT12Q8WYK0 555 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 CCDC42Q96M95 316 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 IMMP2LQ96T52 175 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 NMNAT3Q96T66 252 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 CXorf21Q9HAI6 301 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 HRASLSQ9HDD0 168 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 GPR84Q9NQS5 396 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 AK3Q9UIJ7 227 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 ANAPC10Q9UM13 185 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 PKIGQ9Y2B9 76 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 RBM7Q9Y580 266 aaKnown RBP0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 PXMP4Q9Y6I8 212 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 CCDC144AA2RUR9 1427 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 NUP160Q12769 1436 aa0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 DICER1Q9UPY3 1922 aaKnown RBP0.7□□□□□ -2.3
UBE2D3-218ENST00000505009 DIDO1Q9BTC0 2240 aaKnown RBP0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 OR4C45A6NMZ5 311 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 C9JCJ5 164 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 PSMD12O00232 456 aaPredicted RBP0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 LST1O00453 97 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 COX7A2LO14548 114 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 NOS1APO75052 506 aaPredicted RBP0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 APOMO95445 188 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 KRT75O95678 551 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 RPS17P08708 135 aaKnown RBP0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 CYBAP13498 195 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 CA5AP35218 305 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 MARCKSL1P49006 195 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 RAB13P51153 203 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 DEFA1P59665 94 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 SPCS3P61009 180 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 POLR2GP62487 172 aaKnown RBP eCLIP0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 FKBP1AP62942 108 aaKnown RBP0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 EMX1Q04741 257 aaPredicted RBP0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 STX5Q13190 355 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 OR2F1Q13607 317 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 ELOBQ15370 118 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 MOGQ16653 247 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 HIST3H3Q16695 136 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 RGS21Q2M5E4 152 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 C9orf64Q5T6V5 341 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 GLT8D1Q68CQ7 371 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 SPOPLQ6IQ16 392 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 FAM173BQ6P4H8 233 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 SBSNQ6UWP8 590 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 TRAPPC5Q8IUR0 188 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 ROPN1LQ96C74 230 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 GNPNAT1Q96EK6 184 aaPredicted RBP0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 IMP4Q96G21 291 aaKnown RBP0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 DCUN1D1Q96GG9 259 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 OR52E6Q96RD3 313 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 CCL13Q99616 98 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 CMSS1Q9BQ75 279 aaKnown RBP0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 ADAT1Q9BUB4 502 aaKnown RBP0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 COMMD5Q9GZQ3 224 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 XAGE1AQ9HD64 81 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 MTUS2Q5JR59 1369 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 ROBO3Q96MS0 1386 aa0.69□□□□□ -2.3
UBE2D3-218ENST00000505009 DLG5Q8TDM6 1919 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 TRAV7A0A075B6U4 112 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 TMEM269A0A1B0GVZ9 245 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 TRAPPC13A5PLN9 417 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 SMIM9A6NGZ8 99 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 TRAPPC2LH3BP13 241 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 CHP2O43745 196 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 ORC5O43913 435 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 IFNA16P05015 189 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 SRP19P09132 144 aaKnown RBP0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 OR5G3P0C626 314 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 HIST1H1EP10412 219 aaKnown RBP0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 S100A7P31151 101 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 CDKN2CP42773 168 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 CSN1S1P47710 185 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 RAB5BP61020 215 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 PSME3P61289 254 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 RPL30P62888 115 aaKnown RBP0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 MRPS25P82663 173 aaKnown RBP0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 SURF2Q15527 256 aaPredicted RBP0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 KISS1Q15726 138 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 GRK1Q15835 563 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 NDUFA5Q16718 116 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 AKIRIN2Q53H80 203 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 TNFAIP8L3Q5GJ75 292 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms