RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 SPINK9Q5DT21 86 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 ZNF506Q5JVG8 444 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 FAM53AQ6NSI3 398 aaPredicted RBP5.66□□□□□ -1.5
USP39-219ENST00000496047 LYPD2Q6UXB3 125 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 CENPVQ7Z7K6 275 aaPredicted RBP5.66□□□□□ -1.5
USP39-219ENST00000496047 ODF3L1Q8IXM7 274 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 ABHD12Q8N2K0 398 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 CLRN3Q8NCR9 226 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 OR10G4Q8NGN3 311 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 OR10G9Q8NGN4 311 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 OR10G7Q8NGN6 311 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 OR1L8Q8NGR8 309 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 NANPQ8TBE9 248 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 MBD3L1Q8WWY6 194 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 C22orf15Q8WYQ4 148 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 LHX4Q969G2 390 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 NIPSNAP3BQ9BS92 247 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 HINT2Q9BX68 163 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 NPCDR1Q9BY65 106 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 MRPL20Q9BYC9 149 aaKnown RBP5.66□□□□□ -1.5
USP39-219ENST00000496047 MAP1LC3BQ9GZQ8 125 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 CHODLQ9H9P2 273 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 NPVFQ9HCQ7 196 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 SMCO4Q9NRQ5 59 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 TMEM14BQ9NUH8 114 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 CTSZQ9UBR2 303 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 COL6A6A6NMZ7 2263 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 ZFP92A6NM28 416 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 C15orf62A8K5M9 175 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 H0YJW9 148 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 TNFRSF13BO14836 293 aaPredicted RBP5.65□□□□□ -1.5
USP39-219ENST00000496047 SAA1P0DJI8 122 aaPredicted RBP5.65□□□□□ -1.5
USP39-219ENST00000496047 CT45A6P0DMU7 189 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 CT45A5P0DMU8 189 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 CT45A7P0DMV0 189 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 BCL2P10415 239 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 ADCYAP1P18509 176 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 MAS1LP35410 378 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 OPRK1P41145 380 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 VDAC2P45880 294 aaPredicted RBP5.65□□□□□ -1.5
USP39-219ENST00000496047 GPR6P46095 362 aaPredicted RBP5.65□□□□□ -1.5
USP39-219ENST00000496047 FHITP49789 147 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 BRWD1-AS2P59051 145 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 RPL8P62917 257 aaKnown RBP5.65□□□□□ -1.5
USP39-219ENST00000496047 ARL16Q0P5N6 197 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 PNRC1Q12796 327 aaPredicted RBP5.65□□□□□ -1.5
USP39-219ENST00000496047 HAGHQ16775 308 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 HLA-DRB5Q30154 266 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 ETFRF1Q6IPR1 90 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 FAM122CQ6P4D5 195 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 TEPPQ6URK8 271 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 LCN15Q6UWW0 184 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 DTX2Q86UW9 622 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 IQCF2Q8IXL9 164 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 VKORC1L1Q8N0U8 176 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 BEND2Q8NDZ0 799 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 OR5AN1Q8NGI8 311 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 C8orf46Q8TAG6 207 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 RPEQ96AT9 228 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 SLC35E1Q96K37 410 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 MS4A7Q9GZW8 240 aaPredicted RBP5.65□□□□□ -1.5
USP39-219ENST00000496047 RPS10P5Q9NQ39 176 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 GNG13Q9P2W3 67 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 ONECUT1Q9UBC0 465 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 VAX2Q9UIW0 290 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 WDR83OSQ9Y284 106 aa5.65□□□□□ -1.5
USP39-219ENST00000496047 TNCP24821 2201 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 IGHV2-26A0A0B4J1V2 119 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 LOC102723971A0A1B0GUV8 181 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 PMS2P5A8MQ11 134 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 B4DEV8 164 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 M0R1W7 72 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 CORTO00230 105 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 ENSAO43768 121 aaKnown RBP5.64□□□□□ -1.51
USP39-219ENST00000496047 PROP1O75360 226 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 MMP23AO75900 390 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 COMPP49747 757 aaPredicted RBP5.64□□□□□ -1.51
USP39-219ENST00000496047 CEBPGP53567 150 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 SRSF3P84103 164 aaKnown RBP5.64□□□□□ -1.51
USP39-219ENST00000496047 HNF4GQ14541 408 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 GUCA2BQ16661 112 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 FAM74A3Q4VXF1 159 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 AKIRIN2Q53H80 203 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 C2orf83Q53S99 150 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 AVPI1Q5T686 147 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 WDR25Q64LD2 544 aaPredicted RBP5.64□□□□□ -1.51
USP39-219ENST00000496047 C11orf71Q6IPW1 123 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 SPSB3Q6PJ21 355 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 HAPLN4Q86UW8 402 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 MMD2Q8IY49 270 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 C15orf54Q8N8G6 183 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 CLDND2Q8NHS1 167 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 TMEM167AQ8TBQ9 72 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 RXFP4Q8TDU9 374 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 TVP23CQ96ET8 276 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 RCC1LQ96I51 464 aaKnown RBP5.64□□□□□ -1.51
USP39-219ENST00000496047 RNF2Q99496 336 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 NABP2Q9BQ15 211 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 TXNDC17Q9BRA2 123 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 SSBP3Q9BWW4 388 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms