RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 LAX1Q8IWV1 398 aa9.51□□□□□ -0.89
HSPG2-212ENST00000493940 ZNF502Q8TBZ5 544 aa9.51□□□□□ -0.89
HSPG2-212ENST00000493940 CD300LFQ8TDQ1 290 aa9.51□□□□□ -0.89
HSPG2-212ENST00000493940 SEC22AQ96IW7 307 aa9.51□□□□□ -0.89
HSPG2-212ENST00000493940 QTRT1Q9BXR0 403 aaKnown RBP9.51□□□□□ -0.89
HSPG2-212ENST00000493940 WFDC10AQ9H1F0 79 aa9.51□□□□□ -0.89
HSPG2-212ENST00000493940 TENM2Q9NT68 2774 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 TMEM213A2RRL7 107 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 C3orf84H3BNL1 204 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 TRAPPC2P0DI81 140 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 TRAPPC2BP0DI82 140 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 OR13C7P0DN81 318 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 ARL3P36405 182 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 UCP3P55916 312 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 TATDN3Q17R31 274 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 TM4SF20Q53R12 229 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 MZT2AQ6P582 158 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 GPHB5Q86YW7 130 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 WDR89Q96FK6 387 aaPredicted RBP9.5□□□□□ -0.89
HSPG2-212ENST00000493940 RCHY1Q96PM5 261 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 TM2D3Q9BRN9 247 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 AIFM2Q9BRQ8 373 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 COMMD5Q9GZQ3 224 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 MTFP1Q9UDX5 166 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 MLXQ9UH92 298 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 OR51B2Q9Y5P1 312 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 LYSTQ99698 3801 aa9.5□□□□□ -0.89
HSPG2-212ENST00000493940 A8MZ25 164 aa9.49□□□□□ -0.89
HSPG2-212ENST00000493940 LGALS9O00182 355 aa9.49□□□□□ -0.89
HSPG2-212ENST00000493940 FGF2P09038 288 aa9.49□□□□□ -0.89
HSPG2-212ENST00000493940 DEFA4P12838 97 aa9.49□□□□□ -0.89
HSPG2-212ENST00000493940 CBLN1P23435 193 aa9.49□□□□□ -0.89
HSPG2-212ENST00000493940 FAAP20Q6NZ36 180 aa9.49□□□□□ -0.89
HSPG2-212ENST00000493940 LINC00322Q6ZN03 302 aaPredicted RBP9.49□□□□□ -0.89
HSPG2-212ENST00000493940 GPR141Q7Z602 305 aa9.49□□□□□ -0.89
HSPG2-212ENST00000493940 CLVS1Q8IUQ0 354 aaPredicted RBP9.49□□□□□ -0.89
HSPG2-212ENST00000493940 CADM3Q8N126 398 aa9.49□□□□□ -0.89
HSPG2-212ENST00000493940 OR1L8Q8NGR8 309 aa9.49□□□□□ -0.89
HSPG2-212ENST00000493940 DYNC2LI1Q8TCX1 351 aa9.49□□□□□ -0.89
HSPG2-212ENST00000493940 EEF1AKMT3Q96AZ1 226 aa9.49□□□□□ -0.89
HSPG2-212ENST00000493940 TP53RKQ96S44 253 aa9.49□□□□□ -0.89
HSPG2-212ENST00000493940 HINT2Q9BX68 163 aa9.49□□□□□ -0.89
HSPG2-212ENST00000493940 TMEM14BQ9NUH8 114 aa9.49□□□□□ -0.89
HSPG2-212ENST00000493940 PEMTQ9UBM1 199 aa9.49□□□□□ -0.89
HSPG2-212ENST00000493940 H0Y980 276 aa9.48□□□□□ -0.89
HSPG2-212ENST00000493940 K7EIM0 57 aa9.48□□□□□ -0.89
HSPG2-212ENST00000493940 IGKV1-5P01602 117 aa9.48□□□□□ -0.89
HSPG2-212ENST00000493940 HIST1H1BP16401 226 aaKnown RBP9.48□□□□□ -0.89
HSPG2-212ENST00000493940 PTBP1P26599 531 aaKnown RBP eCLIP9.48□□□□□ -0.89
HSPG2-212ENST00000493940 GPR183P32249 361 aa9.48□□□□□ -0.89
HSPG2-212ENST00000493940 HAGHQ16775 308 aa9.48□□□□□ -0.89
HSPG2-212ENST00000493940 SLC25A24Q6NUK1 477 aa9.48□□□□□ -0.89
HSPG2-212ENST00000493940 CMTM1Q8IZ96 169 aa9.48□□□□□ -0.89
HSPG2-212ENST00000493940 Q8N402 240 aa9.48□□□□□ -0.89
HSPG2-212ENST00000493940 DEFB125Q8N687 156 aa9.48□□□□□ -0.89
HSPG2-212ENST00000493940 GDPD1Q8N9F7 314 aa9.48□□□□□ -0.89
HSPG2-212ENST00000493940 SRSF8Q9BRL6 282 aaKnown RBP9.48□□□□□ -0.89
HSPG2-212ENST00000493940 CHRDL1Q9BU40 450 aa9.48□□□□□ -0.89
HSPG2-212ENST00000493940 PLEKHA3Q9HB20 300 aa9.48□□□□□ -0.89
HSPG2-212ENST00000493940 F11RQ9Y624 299 aaKnown RBP9.48□□□□□ -0.89
HSPG2-212ENST00000493940 TRBV7-1A0A0A6YYK4 115 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 A0A0G2JRQ6 117 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 ZNF320A2RRD8 509 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 RBMY1BA6NDE4 496 aaKnown RBP9.47□□□□□ -0.89
HSPG2-212ENST00000493940 RBMY1EA6NEQ0 496 aaKnown RBP9.47□□□□□ -0.89
HSPG2-212ENST00000493940 OR2T8A6NH00 312 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 C15orf61A6NNL5 157 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 CD74P04233 296 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 RBMY1DP0C7P1 496 aaKnown RBP9.47□□□□□ -0.89
HSPG2-212ENST00000493940 P0C879 139 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 ADMP35318 185 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 ERVK-16P61578 105 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 SP6Q3SY56 376 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 SPINK9Q5DT21 86 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 FAM209BQ5JX69 171 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 LCN12Q6JVE5 192 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 LPCAT3Q6P1A2 487 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 SLC38A6Q8IZM9 456 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 TMEM61Q8N0U2 210 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 TMEM229BQ8NBD8 167 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 UXS1Q8NBZ7 420 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 SCARB1Q8WTV0 552 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 BORCS5Q969J3 196 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 RETNQ9HD89 108 aa9.47□□□□□ -0.89
HSPG2-212ENST00000493940 RYR2Q92736 4967 aa9.46□□□□□ -0.89
HSPG2-212ENST00000493940 IGHV3OR16-8A0A075B7F1 116 aa9.46□□□□□ -0.9
HSPG2-212ENST00000493940 A0A0B4J293 547 aa9.46□□□□□ -0.9
HSPG2-212ENST00000493940 A8MWP6 167 aa9.46□□□□□ -0.9
HSPG2-212ENST00000493940 DHFRP00374 187 aa9.46□□□□□ -0.9
HSPG2-212ENST00000493940 IGHV3-48P01763 117 aa9.46□□□□□ -0.9
HSPG2-212ENST00000493940 C8orf88P0DMB2 117 aa9.46□□□□□ -0.9
HSPG2-212ENST00000493940 PPP5CP53041 499 aa9.46□□□□□ -0.9
HSPG2-212ENST00000493940 PIGPP57054 158 aa9.46□□□□□ -0.9
HSPG2-212ENST00000493940 CD81P60033 236 aa9.46□□□□□ -0.9
HSPG2-212ENST00000493940 RND3P61587 244 aa9.46□□□□□ -0.9
HSPG2-212ENST00000493940 RNASE10Q5GAN6 216 aaKnown RBP9.46□□□□□ -0.9
HSPG2-212ENST00000493940 MARCH1Q8TCQ1 289 aa9.46□□□□□ -0.9
HSPG2-212ENST00000493940 VN1R17PQ8TDU5 208 aa9.46□□□□□ -0.9
HSPG2-212ENST00000493940 AP3S1Q92572 193 aa9.46□□□□□ -0.9
HSPG2-212ENST00000493940 LSM10Q969L4 123 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms