RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 CMC4P56277 68 aaPredicted RBP1.89□□□□□ -2.11
ITGB1-214ENST00000488427 ACTBP60709 375 aa1.89□□□□□ -2.11
ITGB1-214ENST00000488427 OR8B8Q15620 311 aa1.89□□□□□ -2.11
ITGB1-214ENST00000488427 HSP90AA4PQ58FG1 418 aa1.89□□□□□ -2.11
ITGB1-214ENST00000488427 TTC19Q6DKK2 380 aaPredicted RBP1.89□□□□□ -2.11
ITGB1-214ENST00000488427 THOC7Q6I9Y2 204 aaKnown RBP1.89□□□□□ -2.11
ITGB1-214ENST00000488427 SLC48A1Q6P1K1 146 aa1.89□□□□□ -2.11
ITGB1-214ENST00000488427 TMEM53Q6P2H8 277 aa1.89□□□□□ -2.11
ITGB1-214ENST00000488427 TRMT10CQ7L0Y3 403 aaKnown RBP1.89□□□□□ -2.11
ITGB1-214ENST00000488427 MTERF4Q7Z6M4 381 aaKnown RBP1.89□□□□□ -2.11
ITGB1-214ENST00000488427 LINC00523Q86TU6 105 aa1.89□□□□□ -2.11
ITGB1-214ENST00000488427 MICU2Q8IYU8 434 aa1.89□□□□□ -2.11
ITGB1-214ENST00000488427 EEF1AKMT1Q8WVE0 214 aa1.89□□□□□ -2.11
ITGB1-214ENST00000488427 H1FXQ92522 213 aaKnown RBP1.89□□□□□ -2.11
ITGB1-214ENST00000488427 MALSU1Q96EH3 234 aa1.89□□□□□ -2.11
ITGB1-214ENST00000488427 RDH12Q96NR8 316 aa1.89□□□□□ -2.11
ITGB1-214ENST00000488427 PSME2Q9UL46 239 aa1.89□□□□□ -2.11
ITGB1-214ENST00000488427 POFUT2Q9Y2G5 429 aa1.89□□□□□ -2.11
ITGB1-214ENST00000488427 TBL2Q9Y4P3 447 aaKnown RBP1.89□□□□□ -2.11
ITGB1-214ENST00000488427 LINC01619G3V211 115 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 I3L521 148 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 GYPAP02724 150 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 CCDC172P0C7W6 258 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 HRES1P13985 223 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 FKBP2P26885 142 aaKnown RBP1.88□□□□□ -2.11
ITGB1-214ENST00000488427 GABRA3P34903 492 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 OR12D2P58182 307 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 RUNX1Q01196 453 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 OR1Q1Q15612 314 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 NDUFAF6Q330K2 333 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 C6orf99Q4VX62 202 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 PYDC2Q56P42 97 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 FBXO48Q5FWF7 155 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 ZNF678Q5SXM1 525 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 AMMECR1LQ6DCA0 310 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 OR2T5Q6IEZ7 315 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 C8orf74Q6P047 294 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 MORN3Q6PF18 240 aaPredicted RBP1.88□□□□□ -2.11
ITGB1-214ENST00000488427 TCF24Q7RTU0 167 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 KATNAL2Q8IYT4 538 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 Q8N402 240 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 OR52L1Q8NGH7 329 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 OR2T29Q8NH02 315 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 TMEM234Q8WY98 164 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 OPALINQ96PE5 141 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 UQCC2Q9BRT2 126 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 C11orf68Q9H3H3 251 aaKnown RBP1.88□□□□□ -2.11
ITGB1-214ENST00000488427 ZNF492Q9P255 531 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 STX18Q9P2W9 335 aaKnown RBP1.88□□□□□ -2.11
ITGB1-214ENST00000488427 CES1P1Q9UKY3 287 aa1.88□□□□□ -2.11
ITGB1-214ENST00000488427 NDUFB3O43676 98 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 CST8O60676 142 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 VAPBO95292 243 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 KRT16P08779 473 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 CD7P09564 240 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 OGNP20774 298 aaKnown RBP1.87□□□□□ -2.11
ITGB1-214ENST00000488427 GSTM3P21266 225 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 LCN1P31025 176 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 AQP5P55064 265 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 TAS2R39P59534 338 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 ATP5G2Q06055 141 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 TSNQ15631 228 aaKnown RBP1.87□□□□□ -2.11
ITGB1-214ENST00000488427 FAM131AQ6UXB0 335 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 SLC36A1Q7Z2H8 476 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 SLC35E3Q7Z769 313 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 FAM9CQ8IZT9 166 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 MMGT1Q8N4V1 131 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 LINC00469Q8N7U9 141 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 OR10Z1Q8NGY1 313 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 DDIT4LQ96D03 193 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 YIPF6Q96EC8 236 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 UBE2E2Q96LR5 201 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 STACQ99469 402 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 PRSS27Q9BQR3 290 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 PLEKHA1Q9HB21 404 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 ACER3Q9NUN7 267 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 KAAG1Q9UBP8 84 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 HILPDAQ9Y5L2 63 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 HSPE1-MOB4S4R3N1 261 aa1.87□□□□□ -2.11
ITGB1-214ENST00000488427 DEFB131BA0A096LNP1 70 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 TMEM72A0PK05 275 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 C5orf49A4QMS7 147 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 IZUMO1RA6ND01 250 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 F5H5P2 479 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 SYNGR2O43760 224 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 HSBP1O75506 76 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 KCNK2O95069 426 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 FARS2O95363 451 aaKnown RBP1.86□□□□□ -2.11
ITGB1-214ENST00000488427 GZMAP12544 262 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 RPS4Y1P22090 263 aaKnown RBP1.86□□□□□ -2.11
ITGB1-214ENST00000488427 CXCR1P25024 350 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 CD24P25063 80 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 HLA-DMBP28068 263 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 BRS3P32247 399 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 KRTAP10-4P60372 401 aaPredicted RBP1.86□□□□□ -2.11
ITGB1-214ENST00000488427 ELF3P78545 371 aaPredicted RBP1.86□□□□□ -2.11
ITGB1-214ENST00000488427 IL18Q14116 193 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 SLC36A2Q495M3 483 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 CLEC12AQ5QGZ9 265 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 DPPA2Q7Z7J5 298 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms