RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 TPT1P8Q9HAU6 139 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 MED11Q9P086 117 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 PAIP2BQ9ULR5 123 aaKnown RBP2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 CD109Q6YHK3 1445 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 TUBGCP6Q96RT7 1819 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 CHD5Q8TDI0 1954 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 A0A1B0GV90 55 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 A8MWP4 228 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 IGLL5B9A064 214 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 C9JCJ5 164 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 J3KT08 172 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 K7EP13 123 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 K7ERS5 55 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 AIPO00170 330 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 BANF1O75531 89 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 IGKV1D-33P01593 117 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 IGKV1-33P01594 117 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 APOA2P02652 100 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 BPGMP07738 259 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 ZNF14P17017 642 aaPredicted RBP2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 NTF3P20783 257 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 CA5AP35218 305 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 SERPINB10P48595 397 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 POLR2HP52434 150 aaKnown RBP2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 PIGPP57054 158 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 RPS11P62280 158 aaKnown RBP eCLIP2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 TBPL1P62380 186 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 HBA1P69905 142 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 RPL13AP3Q6NVV1 102 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 SCXQ7RTU7 201 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 TMEM86AQ8N2M4 240 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 OR10D4PQ8NGN7 298 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 MBD3L1Q8WWY6 194 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 RMI2Q96E14 147 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 L3HYPDHQ96EM0 354 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 CARD19Q96LW7 228 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 DOHHQ9BU89 302 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 LINC00574Q9H8X3 128 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 TVP23BQ9NYZ1 205 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 PTPRTO14522 1441 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 SOGA1O94964 1423 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 ERCC6Q03468 1493 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 ZCCHC11Q5TAX3 1644 aaKnown RBP2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 MYH3P11055 1940 aa2.13□□□□□ -2.07
SMARCA1-204ENST00000478420 KIF1BO60333 1816 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 SMARCA2P51531 1590 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 TRAV9-1A0A075B6T8 112 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 TRAV36DV7A0A075B6V5 113 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 TRAV41A0A0B4J266 112 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 LOC102725191A0A1B0GVB3 256 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 TMEM269A0A1B0GVZ9 245 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 A0A1B0GX51 115 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 ZNF98A6NK75 572 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 J3QRK9 145 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 GADD45GO95257 159 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 NRASP01111 189 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 HRASP01112 189 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 KRASP01116 189 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 IFNA7P01567 189 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 IGKV1-5P01602 117 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 IGHV1-46P01743 117 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 C1QCP02747 245 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 TRGV3P03979 118 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 SRP19P09132 144 aaKnown RBP2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 ZNF705DP0CH99 300 aaPredicted RBP2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 PTHLHP12272 177 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 IL1RNP18510 177 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 CRYBB3P26998 211 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 SRIP30626 198 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 GABRA2P47869 451 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 TAS2R45P59539 299 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 RPS28P62857 69 aaKnown RBP2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 FKBP1AP62942 108 aaKnown RBP2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 HTR4Q13639 388 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 NDUFA5Q16718 116 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 LGALS9BQ3B8N2 356 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 LGALS9CQ6DKI2 356 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 ZFAND2AQ8N6M9 145 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 DAND5Q8N907 189 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 NUP35Q8NFH5 326 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 RBPMSQ93062 196 aaKnown RBP2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 TOMM6Q96B49 74 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 ADAT3Q96EY9 351 aaPredicted RBP2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 TM2D3Q9BRN9 247 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 C1QTNF6Q9BXI9 259 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 NKX6-2Q9C056 277 aaPredicted RBP2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 GABARAPL1Q9H0R8 117 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 EFCAB1Q9HAE3 211 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 KLK5Q9Y337 293 aaPredicted RBP2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 LINC00588Q9Y4M8 146 aa2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 YLPM1P49750 1951 aaKnown RBP2.12□□□□□ -2.07
SMARCA1-204ENST00000478420 ADAMTSL1Q8N6G6 1762 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 TECPR2O15040 1411 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 CRB1P82279 1406 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 UHRF1BP1Q6BDS2 1440 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 IGLV3-12A0A075B6K2 115 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 TRAPPC2LH3BP13 241 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 H7BYZ3 331 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms