RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 LRRTM1Q86UE6 522 aa10.83□□□□□ -0.68
SMG5-204ENST00000476954 MFSD4AQ8N468 514 aa10.83□□□□□ -0.68
SMG5-204ENST00000476954 GPHA2Q96T91 129 aa10.83□□□□□ -0.68
SMG5-204ENST00000476954 GINS4Q9BRT9 223 aa10.83□□□□□ -0.68
SMG5-204ENST00000476954 MRPS7Q9Y2R9 242 aaKnown RBP10.83□□□□□ -0.68
SMG5-204ENST00000476954 PRELID3BQ9Y3B1 194 aa10.83□□□□□ -0.68
SMG5-204ENST00000476954 EI24O14681 340 aa10.82□□□□□ -0.68
SMG5-204ENST00000476954 IGLV2-14P01704 120 aa10.82□□□□□ -0.68
SMG5-204ENST00000476954 SMR3BP02814 79 aaPredicted RBP10.82□□□□□ -0.68
SMG5-204ENST00000476954 FCGR3AP08637 254 aa10.82□□□□□ -0.68
SMG5-204ENST00000476954 SPART-AS1P0CW21 52 aa10.82□□□□□ -0.68
SMG5-204ENST00000476954 P2RY14Q15391 338 aa10.82□□□□□ -0.68
SMG5-204ENST00000476954 Q56UQ5 140 aa10.82□□□□□ -0.68
SMG5-204ENST00000476954 ACTL10Q5JWF8 245 aa10.82□□□□□ -0.68
SMG5-204ENST00000476954 UBE2UQ5VVX9 321 aa10.82□□□□□ -0.68
SMG5-204ENST00000476954 ZNF485Q8NCK3 441 aa10.82□□□□□ -0.68
SMG5-204ENST00000476954 CENPNQ96H22 339 aaPredicted RBP10.82□□□□□ -0.68
SMG5-204ENST00000476954 OR10C1Q96KK4 312 aa10.82□□□□□ -0.68
SMG5-204ENST00000476954 RABAC1Q9UI14 185 aa10.82□□□□□ -0.68
SMG5-204ENST00000476954 RBMX2Q9Y388 322 aaKnown RBP10.82□□□□□ -0.68
SMG5-204ENST00000476954 IGKV1D-8A0A087WSZ0 117 aa10.81□□□□□ -0.68
SMG5-204ENST00000476954 TRAV14DV4A0A0A6YYC5 116 aa10.81□□□□□ -0.68
SMG5-204ENST00000476954 FAM3BP58499 235 aaPredicted RBP10.81□□□□□ -0.68
SMG5-204ENST00000476954 RPL11P62913 178 aaKnown RBP10.81□□□□□ -0.68
SMG5-204ENST00000476954 OR4S2Q8NH73 311 aa10.81□□□□□ -0.68
SMG5-204ENST00000476954 TCTEX1D2Q8WW35 142 aa10.81□□□□□ -0.68
SMG5-204ENST00000476954 DGCR14Q96DF8 476 aaKnown RBP10.81□□□□□ -0.68
SMG5-204ENST00000476954 ATG101Q9BSB4 218 aa10.81□□□□□ -0.68
SMG5-204ENST00000476954 URM1Q9BTM9 101 aaKnown RBP10.81□□□□□ -0.68
SMG5-204ENST00000476954 KCNK7Q9Y2U2 307 aa10.81□□□□□ -0.68
SMG5-204ENST00000476954 K7EIM0 57 aa10.8□□□□□ -0.68
SMG5-204ENST00000476954 GYG2O15488 501 aa10.8□□□□□ -0.68
SMG5-204ENST00000476954 ST8SIA3O43173 380 aa10.8□□□□□ -0.68
SMG5-204ENST00000476954 BPNT1O95861 308 aa10.8□□□□□ -0.68
SMG5-204ENST00000476954 OR13C7P0DN81 318 aa10.8□□□□□ -0.68
SMG5-204ENST00000476954 DCKP27707 260 aa10.8□□□□□ -0.68
SMG5-204ENST00000476954 WT1-ASQ06250 92 aa10.8□□□□□ -0.68
SMG5-204ENST00000476954 TIMM50Q3ZCQ8 353 aa10.8□□□□□ -0.68
SMG5-204ENST00000476954 GDPD1Q8N9F7 314 aa10.8□□□□□ -0.68
SMG5-204ENST00000476954 HRASLSQ9HDD0 168 aa10.8□□□□□ -0.68
SMG5-204ENST00000476954 XCL2Q9UBD3 114 aa10.8□□□□□ -0.68
SMG5-204ENST00000476954 SPATA2Q9UM82 520 aa10.8□□□□□ -0.68
SMG5-204ENST00000476954 ORC6Q9Y5N6 252 aa10.8□□□□□ -0.68
SMG5-204ENST00000476954 WBP4O75554 376 aaKnown RBP10.79□□□□□ -0.68
SMG5-204ENST00000476954 ZNF688P0C7X2 276 aa10.79□□□□□ -0.68
SMG5-204ENST00000476954 FCGR1AP12314 374 aa10.79□□□□□ -0.68
SMG5-204ENST00000476954 TAS2R43P59537 309 aa10.79□□□□□ -0.68
SMG5-204ENST00000476954 GNGT1P63211 74 aa10.79□□□□□ -0.68
SMG5-204ENST00000476954 DLK1P80370 383 aa10.79□□□□□ -0.68
SMG5-204ENST00000476954 RBM48Q5RL73 367 aaKnown RBP10.79□□□□□ -0.68
SMG5-204ENST00000476954 TTC23Q5W5X9 447 aa10.79□□□□□ -0.68
SMG5-204ENST00000476954 KRTAP1-5Q9BYS1 174 aa10.79□□□□□ -0.68
SMG5-204ENST00000476954 VSIRQ9H7M9 311 aa10.79□□□□□ -0.68
SMG5-204ENST00000476954 IGKV1D-13A0A0B4J2D9 117 aa10.78□□□□□ -0.68
SMG5-204ENST00000476954 CDK1P06493 297 aa10.78□□□□□ -0.68
SMG5-204ENST00000476954 IGKV1-13P0DP09 117 aa10.78□□□□□ -0.68
SMG5-204ENST00000476954 CD37P11049 281 aa10.78□□□□□ -0.68
SMG5-204ENST00000476954 EIF4EBP1Q13541 118 aaPredicted RBP10.78□□□□□ -0.68
SMG5-204ENST00000476954 DNAL1Q4LDG9 190 aa10.78□□□□□ -0.68
SMG5-204ENST00000476954 FAM222AQ5U5X8 452 aa10.78□□□□□ -0.68
SMG5-204ENST00000476954 SLC7A6OSQ96CW6 309 aaPredicted RBP10.78□□□□□ -0.68
SMG5-204ENST00000476954 NIPSNAP3BQ9BS92 247 aa10.78□□□□□ -0.68
SMG5-204ENST00000476954 BET1LQ9NYM9 111 aa10.78□□□□□ -0.68
SMG5-204ENST00000476954 TAS2R8Q9NYW2 309 aa10.78□□□□□ -0.68
SMG5-204ENST00000476954 DKK2Q9UBU2 259 aa10.78□□□□□ -0.68
SMG5-204ENST00000476954 TRAV2A0A0B4J234 112 aa10.77□□□□□ -0.69
SMG5-204ENST00000476954 K7EQG2 157 aa10.77□□□□□ -0.69
SMG5-204ENST00000476954 DIRAS3O95661 229 aa10.77□□□□□ -0.69
SMG5-204ENST00000476954 HRASP01112 189 aa10.77□□□□□ -0.69
SMG5-204ENST00000476954 SERPINE2P07093 398 aa10.77□□□□□ -0.69
SMG5-204ENST00000476954 DUSP18Q8NEJ0 188 aa10.77□□□□□ -0.69
SMG5-204ENST00000476954 STXBP6Q8NFX7 210 aa10.77□□□□□ -0.69
SMG5-204ENST00000476954 ATP6V0BQ99437 205 aa10.77□□□□□ -0.69
SMG5-204ENST00000476954 COMMD5Q9GZQ3 224 aa10.77□□□□□ -0.69
SMG5-204ENST00000476954 MED4Q9NPJ6 270 aa10.77□□□□□ -0.69
SMG5-204ENST00000476954 DIMT1Q9UNQ2 313 aaKnown RBP10.77□□□□□ -0.69
SMG5-204ENST00000476954 UPK2O00526 184 aa10.76□□□□□ -0.69
SMG5-204ENST00000476954 CD36P16671 472 aa10.76□□□□□ -0.69
SMG5-204ENST00000476954 MYL12AP19105 171 aa10.76□□□□□ -0.69
SMG5-204ENST00000476954 NFYAP23511 347 aaPredicted RBP10.76□□□□□ -0.69
SMG5-204ENST00000476954 RELQ04864 619 aaPredicted RBP10.76□□□□□ -0.69
SMG5-204ENST00000476954 GFI1Q99684 422 aa10.76□□□□□ -0.69
SMG5-204ENST00000476954 QTRT1Q9BXR0 403 aaKnown RBP10.76□□□□□ -0.69
SMG5-204ENST00000476954 IGHV3-48P01763 117 aa10.75□□□□□ -0.69
SMG5-204ENST00000476954 HLA-DQB1P01920 261 aa10.75□□□□□ -0.69
SMG5-204ENST00000476954 EIF4EP06730 217 aaKnown RBP10.75□□□□□ -0.69
SMG5-204ENST00000476954 MAPK3P27361 379 aaPredicted RBP10.75□□□□□ -0.69
SMG5-204ENST00000476954 CLDN12P56749 244 aa10.75□□□□□ -0.69
SMG5-204ENST00000476954 MRPS15P82914 257 aaKnown RBP10.75□□□□□ -0.69
SMG5-204ENST00000476954 ACSM3Q53FZ2 586 aa10.75□□□□□ -0.69
SMG5-204ENST00000476954 TOMM20LQ6UXN7 152 aa10.75□□□□□ -0.69
SMG5-204ENST00000476954 ZNF503Q96F45 646 aa10.75□□□□□ -0.69
SMG5-204ENST00000476954 HSD17B10Q99714 261 aaKnown RBP10.75□□□□□ -0.69
SMG5-204ENST00000476954 SRSF8Q9BRL6 282 aaKnown RBP10.75□□□□□ -0.69
SMG5-204ENST00000476954 NXF2Q9GZY0 626 aaKnown RBP10.75□□□□□ -0.69
SMG5-204ENST00000476954 OR2W1Q9Y3N9 320 aa10.75□□□□□ -0.69
SMG5-204ENST00000476954 F11RQ9Y624 299 aaKnown RBP10.75□□□□□ -0.69
SMG5-204ENST00000476954 A0A075B6Q4 140 aa10.74□□□□□ -0.69
SMG5-204ENST00000476954 IGHV3OR16-12A0A075B7B8 117 aa10.74□□□□□ -0.69
SMG5-204ENST00000476954 CYB5BO43169 146 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms