RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 G6PCP35575 357 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 TPPP2P59282 170 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 RND3P61587 244 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 KLF9Q13886 244 aaPredicted RBP7.52□□□□□ -1.21
HDAC3-208ENST00000476739 MEF2DQ14814 521 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 OXLD1Q5BKU9 147 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 COMMD7Q86VX2 200 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 STX12Q86Y82 276 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 EIF4E3Q8N5X7 224 aaKnown RBP7.52□□□□□ -1.21
HDAC3-208ENST00000476739 ARL6IP6Q8N6S5 226 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 LINC00482Q8N8I6 264 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 ZNF680Q8NEM1 530 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 WFDC9Q8NEX5 89 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 OR5M8Q8NGP6 311 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 VSTM2AQ8TAG5 236 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 CD300LFQ8TDQ1 290 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 C4orf3Q8WVX3 66 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 RBPMSQ93062 196 aaKnown RBP7.52□□□□□ -1.21
HDAC3-208ENST00000476739 UBE2E2Q96LR5 201 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 P2RX4Q99571 388 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 PHB2Q99623 299 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 SDHCQ99643 169 aaPredicted RBP7.52□□□□□ -1.21
HDAC3-208ENST00000476739 RTBDNQ9BSG5 229 aaPredicted RBP7.52□□□□□ -1.21
HDAC3-208ENST00000476739 C5orf66Q9H5L9 145 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 HRASLSQ9HDD0 168 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 ZNF355PQ9NSJ1 428 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 MCUBQ9NWR8 336 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 COMMD9Q9P000 198 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 NSG2Q9Y328 171 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 HSPB11Q9Y547 144 aa7.52□□□□□ -1.21
HDAC3-208ENST00000476739 DBX1A6NMT0 343 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 CCL24O00175 119 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 TRGV3P03979 118 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 CTSDP07339 412 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-208ENST00000476739 IGLL1P15814 213 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 HLA-GP17693 338 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 NUP62P37198 522 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-208ENST00000476739 MYCNOSP40205 109 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 RPL27AP46776 148 aaKnown RBP7.51□□□□□ -1.21
HDAC3-208ENST00000476739 RRAS2P62070 204 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-208ENST00000476739 RPL8P62917 257 aaKnown RBP7.51□□□□□ -1.21
HDAC3-208ENST00000476739 SP6Q3SY56 376 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 Q5BKY6 102 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 SAMD5Q5TGI4 173 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 ADAD2Q8NCV1 583 aaKnown RBP7.51□□□□□ -1.21
HDAC3-208ENST00000476739 DMBX1Q8NFW5 382 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 OR11H1Q8NG94 326 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 OR4A5Q8NH83 315 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 FYTTD1Q96QD9 318 aaKnown RBP7.51□□□□□ -1.21
HDAC3-208ENST00000476739 TP53RKQ96S44 253 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 COA4Q9NYJ1 87 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 TBC1D24Q9ULP9 559 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 GPR132Q9UNW8 380 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 VSIG4Q9Y279 399 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 NBEAL1Q6ZS30 2694 aa7.51□□□□□ -1.21
HDAC3-208ENST00000476739 CREBL2O60519 120 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-208ENST00000476739 ACTL6BO94805 426 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 REG1AP05451 166 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 AREGP15514 252 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 CD33P20138 364 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 SLC6A1P30531 599 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 OR2B8PP59922 312 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 FHL3Q13643 280 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 IZUMO4Q1ZYL8 232 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 TOMM5Q8N4H5 51 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 TTC9CQ8N5M4 171 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 CLRN3Q8NCR9 226 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 ZNF431Q8TF32 576 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-208ENST00000476739 TMEM230Q96A57 120 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 SEC22AQ96IW7 307 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 TMEM68Q96MH6 324 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 PRRT1Q99946 306 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 TCEAL7Q9BRU2 100 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 BIN3Q9NQY0 253 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 SLC2A8Q9NY64 477 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 COPZ2Q9P299 210 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 BOLA1Q9Y3E2 137 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 NOTCH3Q9UM47 2321 aa7.5□□□□□ -1.21
HDAC3-208ENST00000476739 IGHV4OR15-8A0A075B7B6 117 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 A0A087WW49 117 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 C3orf85A0A1B0GTC6 90 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 TEX50A0A1B0GTY4 177 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 PCP4L1A6NKN8 68 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 MPTX1A8MV57 137 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 H0Y980 276 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 H3BUA1 57 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 WRBO00258 174 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 DHFRP00374 187 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 IGKV1-5P01602 117 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 S100A8P05109 93 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 S100A9P06702 114 aaKnown RBP7.49□□□□□ -1.21
HDAC3-208ENST00000476739 LGALS1P09382 135 aaKnown RBP7.49□□□□□ -1.21
HDAC3-208ENST00000476739 S100GP29377 79 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 MAS1LP35410 378 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 RUNX1Q01196 453 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 BEAN1Q3B7T3 259 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 C9orf62Q8N4C0 152 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 OR10W1Q8NGF6 305 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 OR1N2Q8NGR9 330 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 SPIN2AQ99865 258 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms