RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 TRBV20OR9-2A0A075B6H5 130 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 hCG_38984A0A1B0GV85 526 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 C16orf97H3BN30 126 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 IGKV1D-16P01601 117 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 CD55P08174 381 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 FAM106CPP0CH98 169 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 C8orf88P0DMB2 117 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 REG1BP48304 166 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 ZFP36L1Q07352 338 aaKnown RBP9.85□□□□□ -0.83
U2AF1-209ENST00000475639 Q5PR19 223 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 TRAV30A0A087WSZ9 112 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 CT62P0C5K7 136 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 FAM159AQ6UWV7 190 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 OR51G1Q8NGK1 321 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 ROS1P08922 2347 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 CGB1A6NKQ9 187 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 CTSVO60911 334 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 RPL8P62917 257 aaKnown RBP9.85□□□□□ -0.83
U2AF1-209ENST00000475639 C1orf174Q8IYL3 243 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 NBASA2RRP1 2371 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 YLPM1P49750 1951 aaKnown RBP9.85□□□□□ -0.83
U2AF1-209ENST00000475639 RBMY1BA6NDE4 496 aaKnown RBP9.85□□□□□ -0.83
U2AF1-209ENST00000475639 RBMY1EA6NEQ0 496 aaKnown RBP9.85□□□□□ -0.83
U2AF1-209ENST00000475639 ITGB1BP1O14713 200 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 ATP5LO75964 103 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 PLAUP00749 431 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 RBMY1DP0C7P1 496 aaKnown RBP9.85□□□□□ -0.83
U2AF1-209ENST00000475639 RBMY1A1P0DJD3 496 aaKnown RBP9.85□□□□□ -0.83
U2AF1-209ENST00000475639 RBMY1CP0DJD4 496 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 KIAA1644Q3SXP7 199 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 WFIKKN1Q96NZ8 548 aa9.85□□□□□ -0.83
U2AF1-209ENST00000475639 SLC25A10Q9UBX3 287 aaPredicted RBP9.85□□□□□ -0.83
U2AF1-209ENST00000475639 IGHV1OR21-1A0A087WYE8 117 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 LOC101059948A0A1B0GTJ6 334 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 NPIPB4C9JG80 1138 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 CLEC2AQ6UVW9 174 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 UNQ5815/PRO19632Q6UWF5 114 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 RNF144BQ7Z419 303 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 SPRED2Q7Z698 418 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 MRPL52Q86TS9 123 aaKnown RBP9.84□□□□□ -0.83
U2AF1-209ENST00000475639 OR2H1Q9GZK4 316 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 FSCN3Q9NQT6 498 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 FOXJ2Q9P0K8 574 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 UNC80Q8N2C7 3258 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 AGFG2O95081 481 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 CLDND2Q8NHS1 167 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 SPSB4Q96A44 273 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 TMEM160Q9NX00 188 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 TRBV9A0A0B4J1U6 114 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 APOMO95445 188 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 CNTFRP26992 372 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 SAMD13Q5VXD3 122 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 FAM90A2PQ658T7 463 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 CADM4Q8NFZ8 388 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 EAF1Q96JC9 268 aaPredicted RBP9.84□□□□□ -0.83
U2AF1-209ENST00000475639 QTRT1Q9BXR0 403 aaKnown RBP9.84□□□□□ -0.83
U2AF1-209ENST00000475639 DOCK8Q8NF50 2099 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 DOCK9Q9BZ29 2069 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 HTTP42858 3142 aa9.84□□□□□ -0.83
U2AF1-209ENST00000475639 H3BRM9 83 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 AMY1AP04745 511 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 MYF5P13349 255 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 TOMM7Q9P0U1 55 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 FREM3P0C091 2139 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 TRAV8-2A0A0B4J237 113 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 DPRXA6NFQ7 191 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 C9orf172C9J069 976 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 TSPAN2O60636 221 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 HBBP68871 147 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 GUSBP11Q6P575 273 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 TAF15Q92804 592 aaKnown RBP eCLIP9.83□□□□□ -0.84
U2AF1-209ENST00000475639 CITED2Q99967 270 aaPredicted RBP9.83□□□□□ -0.84
U2AF1-209ENST00000475639 CLDN16Q9Y5I7 305 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 TMEM14DPA8MWL7 114 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 ASAH2BP0C7U1 165 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 PSG9Q00887 426 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 PSG6Q00889 435 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 HCP5Q6MZN7 132 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 VN1R4Q7Z5H5 301 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 CEACAM4O75871 244 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 TDHQ8IZJ6 230 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 DEFB123Q8N688 67 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 OR5AN1Q8NGI8 311 aa9.83□□□□□ -0.84
U2AF1-209ENST00000475639 LIPT2A6NK58 231 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 ISG15P05161 165 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 PEBP1P30086 187 aaKnown RBP9.82□□□□□ -0.84
U2AF1-209ENST00000475639 MPV17P39210 176 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 CDKN1BP46527 198 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 SLC25A53Q5H9E4 307 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 RASL10BQ96S79 203 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 C19orf24Q9BVV8 132 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 TNFRSF18Q9Y5U5 241 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 SPCS1Q9Y6A9 102 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 IGHV5-51A0A0C4DH38 117 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 DLL1O00548 723 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 NPFFO15130 113 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 CEACAM8P31997 349 aaPredicted RBP9.82□□□□□ -0.84
U2AF1-209ENST00000475639 TMEM52Q8NDY8 209 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 PRR7Q8TB68 274 aa9.82□□□□□ -0.84
U2AF1-209ENST00000475639 ASB10Q8WXI3 467 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms