RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 ANXA7P20073 488 aaKnown RBP9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 CHRNA7P36544 502 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 CDX1P47902 265 aaPredicted RBP9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 DHRS2Q13268 280 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 ECSCRQ19T08 205 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 KLK9Q2XQG4 91 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 PDLIM3Q53GG5 364 aaPredicted RBP9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 NRARPQ7Z6K4 114 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 SLC35G3Q8N808 338 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 LHFPL5Q8TAF8 219 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 USMG5Q96IX5 58 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 UBE2E2Q96LR5 201 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 GPN1Q9HCN4 374 aaPredicted RBP9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 LINC00527Q9UJ94 153 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 KLK9Q9UKQ9 250 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 FBXO7Q9Y3I1 522 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 TRAV6A0A075B6T7 132 aa9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 TEX22C9J3V5 150 aa9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 M0QZ24 198 aa9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 LY86O95711 162 aa9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 IFNA21P01568 189 aa9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 SULT1A3P0DMM9 295 aa9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 SULT1A4P0DMN0 295 aa9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 CD28P10747 220 aa9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 PSMB6P28072 239 aa9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 RAB9AP51151 201 aa9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 SPCS3P61009 180 aa9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 SMCO1Q147U7 214 aa9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 NMSQ5H8A3 153 aa9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 MYOZ3Q8TDC0 251 aa9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 CASTOR1Q8WTX7 329 aa9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 FYTTD1Q96QD9 318 aaKnown RBP9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 FAM103A1Q9BTL3 118 aaKnown RBP9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 THYN1Q9P016 225 aa9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 STAB1Q9NY15 2570 aa9.88□□□□□ -0.83
SPTLC1-204ENST00000469778 FAM223BA6NKX1 122 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 SNRPGP15A8MWD9 76 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 FAM90A26D6RGX4 464 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 PLXNB1O43157 2135 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 PF4V1P10720 104 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 ATP5IP56385 69 aaPredicted RBP9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 KRTAP10-3P60369 221 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 ERHP84090 104 aaKnown RBP9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 PRCDQ00LT1 54 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 C2orf68Q2NKX9 166 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 ANKRD55Q3KP44 614 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 TCTEX1D4Q5JR98 221 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 ASPHD1Q5U4P2 390 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 LYZL2Q7Z4W2 148 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 FAM223AQ8IWN6 122 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 NECAP1Q8NC96 275 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 OR5T1Q8NG75 326 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 OR4F17Q8NGA8 305 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 ZNF431Q8TF32 576 aaPredicted RBP9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 GPR146Q96CH1 333 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 OR4F4Q96R69 305 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 CITED2Q99967 270 aaPredicted RBP9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 PLEKHA3Q9HB20 300 aa9.87□□□□□ -0.83
SPTLC1-204ENST00000469778 TENM1Q9UKZ4 2725 aa9.86□□□□□ -0.83
SPTLC1-204ENST00000469778 IGLC7A0M8Q6 106 aa9.86□□□□□ -0.83
SPTLC1-204ENST00000469778 E7EUB6 86 aa9.86□□□□□ -0.83
SPTLC1-204ENST00000469778 INMT-MINDY4F8WBC2 141 aa9.86□□□□□ -0.83
SPTLC1-204ENST00000469778 IFNA17P01571 189 aa9.86□□□□□ -0.83
SPTLC1-204ENST00000469778 CTRB1P17538 263 aa9.86□□□□□ -0.83
SPTLC1-204ENST00000469778 RPL23AP62750 156 aaKnown RBP9.86□□□□□ -0.83
SPTLC1-204ENST00000469778 RUNX1Q01196 453 aa9.86□□□□□ -0.83
SPTLC1-204ENST00000469778 CTRB2Q6GPI1 263 aa9.86□□□□□ -0.83
SPTLC1-204ENST00000469778 ENY2Q9NPA8 101 aa9.86□□□□□ -0.83
SPTLC1-204ENST00000469778 ZNF355PQ9NSJ1 428 aa9.86□□□□□ -0.83
SPTLC1-204ENST00000469778 CACNG5Q9UF02 275 aa9.86□□□□□ -0.83
SPTLC1-204ENST00000469778 NSG2Q9Y328 171 aa9.86□□□□□ -0.83
SPTLC1-204ENST00000469778 TRBV9A0A0B4J1U6 114 aa9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 CGB1A6NKQ9 187 aa9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 ST8SIA3O43173 380 aa9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 SOX15O60248 233 aa9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 MED6O75586 246 aa9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 TRGV3P03979 118 aa9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 OR13C7P0DN81 318 aa9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 DEFA4P12838 97 aa9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 SUB1P53999 127 aaKnown RBP eCLIP9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 RGS21Q2M5E4 152 aa9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 C10orf55Q5SWW7 151 aa9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 Q6ZRM9 215 aa9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 NOXA1Q86UR1 476 aa9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 C12orf45Q8N5I9 185 aaPredicted RBP9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 ZNF491Q8N8L2 437 aa9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 ZNF114Q8NC26 417 aa9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 ATP6V0BQ99437 205 aa9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 HINT2Q9BX68 163 aa9.85□□□□□ -0.83
SPTLC1-204ENST00000469778 A0A0G2JRQ6 117 aa9.84□□□□□ -0.83
SPTLC1-204ENST00000469778 C13orf42A0A1B0GVH6 325 aa9.84□□□□□ -0.83
SPTLC1-204ENST00000469778 A0A1B0GW64 132 aa9.84□□□□□ -0.83
SPTLC1-204ENST00000469778 HMX3A6NHT5 357 aa9.84□□□□□ -0.83
SPTLC1-204ENST00000469778 DBX1A6NMT0 343 aa9.84□□□□□ -0.83
SPTLC1-204ENST00000469778 CORTO00230 105 aa9.84□□□□□ -0.83
SPTLC1-204ENST00000469778 PITX3O75364 302 aa9.84□□□□□ -0.83
SPTLC1-204ENST00000469778 RPLP1P05386 114 aaKnown RBP9.84□□□□□ -0.83
SPTLC1-204ENST00000469778 SNCAP37840 140 aa9.84□□□□□ -0.83
SPTLC1-204ENST00000469778 TPPP2P59282 170 aa9.84□□□□□ -0.83
SPTLC1-204ENST00000469778 WT1-ASQ06250 92 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms