RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 INS-IGF2F8WCM5 200 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 SMLR1H3BR10 107 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 K7EPK0 472 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 GPR137BO60478 399 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 CCNKO75909 580 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 MPC2O95563 127 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 IGHG2P01859 326 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 OPN1MWP04001 364 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 GIPP09681 153 aaPredicted RBP4.69□□□□□ -1.66
USP39-213ENST00000467885 OPN1MW2P0DN77 364 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 OPN1MW3P0DN78 364 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 LYL1P12980 280 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 NKX2-1P43699 371 aaPredicted RBP4.69□□□□□ -1.66
USP39-213ENST00000467885 COMPP49747 757 aaPredicted RBP4.69□□□□□ -1.66
USP39-213ENST00000467885 AKR1C2P52895 323 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 HILS1P60008 231 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 RAP2BP61225 183 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 RAB32Q13637 225 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 KLK9Q2XQG4 91 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 C10orf55Q5SWW7 151 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 ASPHD1Q5U4P2 390 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 PVRIGQ6DKI7 326 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 C11orf87Q6NUJ2 197 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 RBMS3Q6XE24 437 aaKnown RBP4.69□□□□□ -1.66
USP39-213ENST00000467885 C16orf82Q7Z2V1 217 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 Q8N2B8 174 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 OR11H4Q8NGC9 324 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 OR1L8Q8NGR8 309 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 OR5B3Q8NH48 314 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 OR1S1Q8NH92 325 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 PPP1R1CQ8WVI7 109 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 TAF15Q92804 592 aaKnown RBP eCLIP4.69□□□□□ -1.66
USP39-213ENST00000467885 SMIM8Q96KF7 97 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 RASL11BQ9BPW5 248 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 HSPB9Q9BQS6 159 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 MAGT1Q9H0U3 335 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 RBKSQ9H477 322 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 KIAA1456Q9P272 454 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 VPREB3Q9UKI3 123 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 KLK9Q9UKQ9 250 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 FBXO7Q9Y3I1 522 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 NIPBLQ6KC79 2804 aaeCLIP4.68□□□□□ -1.66
USP39-213ENST00000467885 IGLC7A0M8Q6 106 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 DNAJC9-AS1A6NH13 148 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 PMS2P5A8MQ11 134 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 M0QZK8 103 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 WRBO00258 174 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 KCNAB3O43448 404 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 SYNGR2O43760 224 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 TSPAN9O75954 239 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 NXPH3O95157 252 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 CA2P00918 260 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 IFNA17P01571 189 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 IGF1P05019 195 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 CRYGCP07315 174 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 RNASE1P07998 156 aaKnown RBP4.68□□□□□ -1.66
USP39-213ENST00000467885 SLC25A4P12235 298 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 PPIFP30405 207 aaKnown RBP4.68□□□□□ -1.66
USP39-213ENST00000467885 CRIP2P52943 208 aaPredicted RBP4.68□□□□□ -1.66
USP39-213ENST00000467885 NDPQ00604 133 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 WT1-ASQ06250 92 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 TNXAQ16473 311 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 MLANAQ16655 118 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 BSXQ3C1V8 233 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 AKIRIN2Q53H80 203 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 C19orf54Q5BKX5 351 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 SPINK9Q5DT21 86 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 TMEM65Q6PI78 240 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 TCTE3Q8IZS6 198 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 TTC9CQ8N5M4 171 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 LFNGQ8NES3 379 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 RNASE11Q8TAA1 199 aaKnown RBP4.68□□□□□ -1.66
USP39-213ENST00000467885 ZNF418Q8TF45 676 aaPredicted RBP4.68□□□□□ -1.66
USP39-213ENST00000467885 TMEM170AQ8WVE7 144 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 ASB13Q8WXK3 278 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 SPIN2AQ99865 258 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 SPIN2BQ9BPZ2 258 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 COMMD5Q9GZQ3 224 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 SERTAD4Q9NUC0 356 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 OR5AC2Q9NZP5 309 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 CACFD1Q9UGQ2 172 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 ZNF580Q9UK33 172 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 MOB4Q9Y3A3 225 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 DMRT1Q9Y5R6 373 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 TLN2Q9Y4G6 2542 aa4.68□□□□□ -1.66
USP39-213ENST00000467885 HIVEP2P31629 2446 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 NAV3Q8IVL0 2385 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 FAM24AA6NFZ4 105 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 G3V318 75 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 DEDDO75618 318 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 CNIH1O95406 144 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 RLN2P04090 185 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 OR13C7P0DN81 318 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 AREGP15514 252 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 CTRB1P17538 263 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 RPL27AP46776 148 aaKnown RBP4.67□□□□□ -1.66
USP39-213ENST00000467885 MFAP2P55001 183 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 TAS2R30P59541 319 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 GNB1P62873 340 aa4.67□□□□□ -1.66
USP39-213ENST00000467885 UBA52P62987 128 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms