RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 HSPE1P61604 102 aaKnown RBP8□□□□□ -1.13
UPF2-204ENST00000460569 SLC35B1P78383 322 aa8□□□□□ -1.13
UPF2-204ENST00000460569 PRCDQ00LT1 54 aa8□□□□□ -1.13
UPF2-204ENST00000460569 TMEM267Q0VDI3 215 aaPredicted RBP8□□□□□ -1.13
UPF2-204ENST00000460569 FOXL1Q12952 345 aa8□□□□□ -1.13
UPF2-204ENST00000460569 GSG1LQ6UXU4 331 aa8□□□□□ -1.13
UPF2-204ENST00000460569 KLHDC1Q8N7A1 406 aa8□□□□□ -1.13
UPF2-204ENST00000460569 ZBTB8BQ8NAP8 495 aaPredicted RBP8□□□□□ -1.13
UPF2-204ENST00000460569 OR10W1Q8NGF6 305 aa8□□□□□ -1.13
UPF2-204ENST00000460569 OR5M8Q8NGP6 311 aa8□□□□□ -1.13
UPF2-204ENST00000460569 TMEM158Q8WZ71 300 aa8□□□□□ -1.13
UPF2-204ENST00000460569 OR10C1Q96KK4 312 aa8□□□□□ -1.13
UPF2-204ENST00000460569 GON7Q9BXV9 100 aa8□□□□□ -1.13
UPF2-204ENST00000460569 MED28Q9H204 178 aa8□□□□□ -1.13
UPF2-204ENST00000460569 PLEKHA3Q9HB20 300 aa8□□□□□ -1.13
UPF2-204ENST00000460569 NDUFA4L2Q9NRX3 87 aa8□□□□□ -1.13
UPF2-204ENST00000460569 GSKIPQ9P0R6 139 aa8□□□□□ -1.13
UPF2-204ENST00000460569 MGAT4CQ9UBM8 478 aa8□□□□□ -1.13
UPF2-204ENST00000460569 A0A1B0GUS0 222 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 IGLC7A0M8Q6 106 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 TMEM89A2RUT3 159 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 PSMB11A5LHX3 300 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 CEBPZOSA8MTT3 80 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 PITX3O75364 302 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 SIX6O95475 246 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 SCGB1D2O95969 90 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 REG1AP05451 166 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 AREGP15514 252 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 SPCS3P61009 180 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 TNFRSF9Q07011 255 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 AARDQ4LEZ3 155 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 AKIRIN2Q53H80 203 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 ASPHD1Q5U4P2 390 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 CENPVQ7Z7K6 275 aaPredicted RBP7.99□□□□□ -1.13
UPF2-204ENST00000460569 ZNF329Q86UD4 541 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 MRPL41Q8IXM3 137 aaKnown RBP7.99□□□□□ -1.13
UPF2-204ENST00000460569 WNT10AQ9GZT5 417 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 ENY2Q9NPA8 101 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 HSPB7Q9UBY9 170 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 CACFD1Q9UGQ2 172 aa7.99□□□□□ -1.13
UPF2-204ENST00000460569 FAM90A26D6RGX4 464 aa7.98□□□□□ -1.13
UPF2-204ENST00000460569 OR13C7P0DN81 318 aa7.98□□□□□ -1.13
UPF2-204ENST00000460569 NKX2-1P43699 371 aaPredicted RBP7.98□□□□□ -1.13
UPF2-204ENST00000460569 PROK1P58294 105 aa7.98□□□□□ -1.13
UPF2-204ENST00000460569 RRAS2P62070 204 aaPredicted RBP7.98□□□□□ -1.13
UPF2-204ENST00000460569 CFHR3Q02985 330 aa7.98□□□□□ -1.13
UPF2-204ENST00000460569 WT1-ASQ06250 92 aa7.98□□□□□ -1.13
UPF2-204ENST00000460569 FCN2Q15485 313 aa7.98□□□□□ -1.13
UPF2-204ENST00000460569 AWAT1Q58HT5 328 aa7.98□□□□□ -1.13
UPF2-204ENST00000460569 C19orf54Q5BKX5 351 aa7.98□□□□□ -1.13
UPF2-204ENST00000460569 CXorf66Q5JRM2 361 aaPredicted RBP7.98□□□□□ -1.13
UPF2-204ENST00000460569 C10orf99Q6UWK7 81 aa7.98□□□□□ -1.13
UPF2-204ENST00000460569 HSD17B13Q7Z5P4 300 aaPredicted RBP7.98□□□□□ -1.13
UPF2-204ENST00000460569 OR5T1Q8NG75 326 aa7.98□□□□□ -1.13
UPF2-204ENST00000460569 OR4D5Q8NGN0 318 aa7.98□□□□□ -1.13
UPF2-204ENST00000460569 OR52E5Q8NH55 327 aa7.98□□□□□ -1.13
UPF2-204ENST00000460569 FAM110DQ8TAY7 271 aaPredicted RBP7.98□□□□□ -1.13
UPF2-204ENST00000460569 C2orf50Q96LR7 162 aa7.98□□□□□ -1.13
UPF2-204ENST00000460569 TMEM68Q96MH6 324 aa7.98□□□□□ -1.13
UPF2-204ENST00000460569 SRSF8Q9BRL6 282 aaKnown RBP7.98□□□□□ -1.13
UPF2-204ENST00000460569 RBKSQ9H477 322 aa7.98□□□□□ -1.13
UPF2-204ENST00000460569 ZNF355PQ9NSJ1 428 aa7.98□□□□□ -1.13
UPF2-204ENST00000460569 NPIPB5A8MRT5 1133 aa7.97□□□□□ -1.13
UPF2-204ENST00000460569 WRBO00258 174 aa7.97□□□□□ -1.13
UPF2-204ENST00000460569 SOX15O60248 233 aa7.97□□□□□ -1.13
UPF2-204ENST00000460569 FBXO24O75426 580 aa7.97□□□□□ -1.13
UPF2-204ENST00000460569 MED6O75586 246 aa7.97□□□□□ -1.13
UPF2-204ENST00000460569 PF4V1P10720 104 aa7.97□□□□□ -1.13
UPF2-204ENST00000460569 PSMB6P28072 239 aa7.97□□□□□ -1.13
UPF2-204ENST00000460569 PPIFP30405 207 aaKnown RBP7.97□□□□□ -1.13
UPF2-204ENST00000460569 H2BFSP57053 126 aa7.97□□□□□ -1.13
UPF2-204ENST00000460569 PDLIM3Q53GG5 364 aaPredicted RBP7.97□□□□□ -1.13
UPF2-204ENST00000460569 Q6ZNX1 250 aa7.97□□□□□ -1.13
UPF2-204ENST00000460569 C19orf35Q6ZS72 473 aa7.97□□□□□ -1.13
UPF2-204ENST00000460569 OR5AU1Q8NGC0 362 aa7.97□□□□□ -1.13
UPF2-204ENST00000460569 OR4X2Q8NGF9 303 aa7.97□□□□□ -1.13
UPF2-204ENST00000460569 DTD1Q8TEA8 209 aa7.97□□□□□ -1.13
UPF2-204ENST00000460569 MAGT1Q9H0U3 335 aa7.97□□□□□ -1.13
UPF2-204ENST00000460569 HEYLQ9NQ87 328 aaPredicted RBP7.97□□□□□ -1.13
UPF2-204ENST00000460569 hCG_2014768A0A024R1R8 64 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 SYNGR2O43760 224 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 SSSCA1O60232 199 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 IGHG4P01861 327 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 PRH1P02810 166 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 IAPPP10997 89 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 DEFA4P12838 97 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 CTRB1P17538 263 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 CXCL3P19876 107 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 SNCAP37840 140 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 S100A10P60903 97 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 POLR2GP62487 172 aaKnown RBP eCLIP7.96□□□□□ -1.14
UPF2-204ENST00000460569 ERHP84090 104 aaKnown RBP7.96□□□□□ -1.14
UPF2-204ENST00000460569 CTRB2Q6GPI1 263 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 C11orf87Q6NUJ2 197 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 TEX38Q6PEX7 206 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 LCNL1Q6ZST4 164 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 TTC9CQ8N5M4 171 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 OR2C3Q8N628 320 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 COMMD1Q8N668 190 aa7.96□□□□□ -1.14
UPF2-204ENST00000460569 C11orf44Q8N8P7 122 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms