RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 REG1AP05451 166 aa13.4□□□□□ -0.26
SCARNA2-201ENST00000458748 PTBP1P26599 531 aaKnown RBP eCLIP13.4□□□□□ -0.26not detected■■■■□ 25.5
SCARNA2-201ENST00000458748 RND3P61587 244 aa13.4□□□□□ -0.26
SCARNA2-201ENST00000458748 ZNF585BQ52M93 769 aa13.4□□□□□ -0.26
SCARNA2-201ENST00000458748 LCN12Q6JVE5 192 aa13.4□□□□□ -0.26
SCARNA2-201ENST00000458748 STEAP1BQ6NZ63 245 aa13.4□□□□□ -0.26
SCARNA2-201ENST00000458748 H2BFWTQ7Z2G1 175 aa13.4□□□□□ -0.26
SCARNA2-201ENST00000458748 OR1L6Q8NGR2 347 aa13.4□□□□□ -0.26
SCARNA2-201ENST00000458748 TERB2Q8NHR7 220 aa13.4□□□□□ -0.26
SCARNA2-201ENST00000458748 SMIM4Q8WVI0 70 aa13.4□□□□□ -0.26
SCARNA2-201ENST00000458748 ISOC1Q96CN7 298 aa13.4□□□□□ -0.26
SCARNA2-201ENST00000458748 HINT2Q9BX68 163 aa13.4□□□□□ -0.26
SCARNA2-201ENST00000458748 RSL24D1Q9UHA3 163 aaKnown RBP13.4□□□□□ -0.26
SCARNA2-201ENST00000458748 OR51B2Q9Y5P1 312 aa13.4□□□□□ -0.26
SCARNA2-201ENST00000458748 IGLV11-55A0A075B6I3 123 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 TEX50A0A1B0GTY4 177 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 IGLC7A0M8Q6 106 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 DISC1C4P0D8 188 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 H3BMQ9 156 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 BMPR1BO00238 502 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 CTDSPLO15194 276 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 B3GALNT1O75752 331 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 OR13C7P0DN81 318 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 MYOD1P15172 320 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 ARL3P36405 182 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 MECP2P51608 486 aaKnown RBP13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 PIGPP57054 158 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 SCGB2B2Q4G0G5 96 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 LHFPL1Q86WI0 220 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 GDPD1Q8N9F7 314 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 OR4A16Q8NH70 328 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 FANCD2OSQ96PS1 177 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 COPZ2Q9P299 210 aa13.39□□□□□ -0.27
SCARNA2-201ENST00000458748 CGB1A6NKQ9 187 aa13.38□□□□□ -0.27
SCARNA2-201ENST00000458748 NDUFB8O95169 186 aa13.38□□□□□ -0.27
SCARNA2-201ENST00000458748 FAM106AQ4KMX7 169 aa13.38□□□□□ -0.27
SCARNA2-201ENST00000458748 OR2K2Q8NGT1 345 aa13.38□□□□□ -0.27
SCARNA2-201ENST00000458748 NDUFA4L2Q9NRX3 87 aa13.38□□□□□ -0.27
SCARNA2-201ENST00000458748 CCDC160A6NGH7 325 aa13.37□□□□□ -0.27
SCARNA2-201ENST00000458748 C15orf61A6NNL5 157 aa13.37□□□□□ -0.27
SCARNA2-201ENST00000458748 AKAIN1P0CW23 69 aa13.37□□□□□ -0.27
SCARNA2-201ENST00000458748 PPP5CP53041 499 aa13.37□□□□□ -0.27
SCARNA2-201ENST00000458748 CLEC19AQ6UXS0 136 aa13.37□□□□□ -0.27
SCARNA2-201ENST00000458748 GTSCR1Q86UQ5 136 aa13.37□□□□□ -0.27
SCARNA2-201ENST00000458748 GPHB5Q86YW7 130 aa13.37□□□□□ -0.27
SCARNA2-201ENST00000458748 Q8N402 240 aa13.37□□□□□ -0.27
SCARNA2-201ENST00000458748 MCFD2Q8NI22 146 aa13.37□□□□□ -0.27
SCARNA2-201ENST00000458748 TMEM14BQ9NUH8 114 aa13.37□□□□□ -0.27
SCARNA2-201ENST00000458748 C14orf166Q9Y224 244 aaKnown RBP13.37□□□□□ -0.27
SCARNA2-201ENST00000458748 NBEAL2Q6ZNJ1 2754 aa13.37□□□□□ -0.27
SCARNA2-201ENST00000458748 C3orf85A0A1B0GTC6 90 aa13.36□□□□□ -0.27
SCARNA2-201ENST00000458748 PPP5D1E7EU14 171 aa13.36□□□□□ -0.27
SCARNA2-201ENST00000458748 LGALS9O00182 355 aa13.36□□□□□ -0.27
SCARNA2-201ENST00000458748 CSN3P07498 182 aa13.36□□□□□ -0.27
SCARNA2-201ENST00000458748 SURF2Q15527 256 aaPredicted RBP13.36□□□□□ -0.27
SCARNA2-201ENST00000458748 C19orf35Q6ZS72 473 aa13.36□□□□□ -0.27
SCARNA2-201ENST00000458748 SGPP2Q8IWX5 399 aa13.36□□□□□ -0.27
SCARNA2-201ENST00000458748 OR10W1Q8NGF6 305 aa13.36□□□□□ -0.27
SCARNA2-201ENST00000458748 VN1R17PQ8TDU5 208 aa13.36□□□□□ -0.27
SCARNA2-201ENST00000458748 DYNLRB2Q8TF09 96 aa13.36□□□□□ -0.27
SCARNA2-201ENST00000458748 SEC22AQ96IW7 307 aa13.36□□□□□ -0.27
SCARNA2-201ENST00000458748 PRRT1Q99946 306 aa13.36□□□□□ -0.27
SCARNA2-201ENST00000458748 NSG2Q9Y328 171 aa13.36□□□□□ -0.27
SCARNA2-201ENST00000458748 FABP12A6NFH5 140 aa13.35□□□□□ -0.27
SCARNA2-201ENST00000458748 OR2C1O95371 312 aa13.35□□□□□ -0.27
SCARNA2-201ENST00000458748 IGHV3-23P01764 117 aa13.35□□□□□ -0.27
SCARNA2-201ENST00000458748 CTSDP07339 412 aaPredicted RBP13.35□□□□□ -0.27
SCARNA2-201ENST00000458748 AKR1C2P52895 323 aa13.35□□□□□ -0.27
SCARNA2-201ENST00000458748 WT1-ASQ06250 92 aa13.35□□□□□ -0.27
SCARNA2-201ENST00000458748 TRIM16LQ309B1 348 aa13.35□□□□□ -0.27
SCARNA2-201ENST00000458748 SLC25A24Q6NUK1 477 aa13.35□□□□□ -0.27
SCARNA2-201ENST00000458748 IL34Q6ZMJ4 242 aa13.35□□□□□ -0.27
SCARNA2-201ENST00000458748 OR4D10Q8NGI6 311 aa13.35□□□□□ -0.27
SCARNA2-201ENST00000458748 OR13C8Q8NGS7 320 aa13.35□□□□□ -0.27
SCARNA2-201ENST00000458748 MRGPRFQ96AM1 343 aa13.35□□□□□ -0.27
SCARNA2-201ENST00000458748 ATP6V0BQ99437 205 aa13.35□□□□□ -0.27
SCARNA2-201ENST00000458748 PDCD10Q9BUL8 212 aa13.35□□□□□ -0.27
SCARNA2-201ENST00000458748 SLIRPQ9GZT3 109 aaKnown RBP13.35□□□□□ -0.27
SCARNA2-201ENST00000458748 PALMDQ9NP74 551 aa13.35□□□□□ -0.27
SCARNA2-201ENST00000458748 F11RQ9Y624 299 aaKnown RBP13.35□□□□□ -0.27
SCARNA2-201ENST00000458748 GSTZ1O43708 216 aaPredicted RBP13.34□□□□□ -0.27
SCARNA2-201ENST00000458748 CLEC3BP05452 202 aa13.34□□□□□ -0.27
SCARNA2-201ENST00000458748 PI3P19957 117 aa13.34□□□□□ -0.27
SCARNA2-201ENST00000458748 PLET1Q6UQ28 207 aa13.34□□□□□ -0.27
SCARNA2-201ENST00000458748 RNASE11Q8TAA1 199 aaKnown RBP13.34□□□□□ -0.27
SCARNA2-201ENST00000458748 RRNAD1Q96FB5 475 aaKnown RBP13.34□□□□□ -0.27
SCARNA2-201ENST00000458748 CCDC140Q96MF4 163 aa13.34□□□□□ -0.27
SCARNA2-201ENST00000458748 SCGB3A2Q96PL1 93 aa13.34□□□□□ -0.27
SCARNA2-201ENST00000458748 GAR1Q9NY12 217 aaKnown RBP13.34□□□□□ -0.27
SCARNA2-201ENST00000458748 TECRQ9NZ01 308 aaKnown RBP13.34□□□□□ -0.27
SCARNA2-201ENST00000458748 SCP2D1Q9UJQ7 156 aa13.34□□□□□ -0.27
SCARNA2-201ENST00000458748 DNAH9Q9NYC9 4486 aa13.33□□□□□ -0.28
SCARNA2-201ENST00000458748 ZNF320A2RRD8 509 aa13.33□□□□□ -0.28
SCARNA2-201ENST00000458748 MFSD2BA6NFX1 497 aa13.33□□□□□ -0.28
SCARNA2-201ENST00000458748 S100A5P33763 92 aa13.33□□□□□ -0.28
SCARNA2-201ENST00000458748 HSPE1P61604 102 aaKnown RBP13.33□□□□□ -0.28
SCARNA2-201ENST00000458748 ERHP84090 104 aaKnown RBP13.33□□□□□ -0.28
SCARNA2-201ENST00000458748 HAPLN4Q86UW8 402 aa13.33□□□□□ -0.28
SCARNA2-201ENST00000458748 OR1P1Q8NH06 330 aa13.33□□□□□ -0.28
SCARNA2-201ENST00000458748 ZNF502Q8TBZ5 544 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms