RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 CX3CL1P78423 397 aa13.96□□□□□ -0.17
PMS1-213ENST00000441310 CLUHP3Q96NS8 147 aa13.96□□□□□ -0.17
PMS1-213ENST00000441310 ZFHX4Q86UP3 3567 aa13.96□□□□□ -0.17
PMS1-213ENST00000441310 FGF23Q9GZV9 251 aaPredicted RBP13.96□□□□□ -0.17
PMS1-213ENST00000441310 SERTAD4Q9NUC0 356 aa13.96□□□□□ -0.17
PMS1-213ENST00000441310 LRP5LA4QPB2 252 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 FAM90A10PA6NDY2 464 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 FAM90A18PA6NE21 464 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 FAM90A16PA6NEW6 464 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 FAM90A20PA6NIJ5 464 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 FAM90A8PA6NJQ4 464 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 FAM90A7PA6NKC0 464 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 FAM90A22PA8MWA6 464 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 FAM90A12PA8MX19 464 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 FAM90A5PA8MXJ8 464 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 FAM90A23PA8MXZ1 464 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 SYNGR1O43759 233 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 APCSP02743 223 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 FAM90A15PP0C7V4 464 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 FAM90A13PP0C7W8 464 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 FAM90A14PP0C7W9 464 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 FAM90A24PP0C7X0 464 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 RAC2P15153 192 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 UBE2G1P62253 170 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 RNASEKQ6P5S7 137 aaKnown RBP13.96□□□□□ -0.18
PMS1-213ENST00000441310 TUSC5Q8IXB3 177 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 DRAM1Q8N682 238 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 Q8N7P7 452 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 SF3B5Q9BWJ5 86 aaKnown RBP13.96□□□□□ -0.18
PMS1-213ENST00000441310 PRRG4Q9BZD6 226 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 CHODLQ9H9P2 273 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 CLEC5AQ9NY25 188 aa13.96□□□□□ -0.18
PMS1-213ENST00000441310 SRSF6Q13247 344 aaKnown RBP13.95□□□□□ -0.18
PMS1-213ENST00000441310 MRPL49Q13405 166 aaKnown RBP13.95□□□□□ -0.18
PMS1-213ENST00000441310 PRR31Q5SQ13 230 aa13.95□□□□□ -0.18
PMS1-213ENST00000441310 ASPHD1Q5U4P2 390 aa13.95□□□□□ -0.18
PMS1-213ENST00000441310 ZNF841Q6ZN19 808 aa13.95□□□□□ -0.18
PMS1-213ENST00000441310 MKXQ8IYA7 352 aa13.95□□□□□ -0.18
PMS1-213ENST00000441310 DEFB125Q8N687 156 aa13.95□□□□□ -0.18
PMS1-213ENST00000441310 C18orf32Q8TCD1 76 aa13.95□□□□□ -0.18
PMS1-213ENST00000441310 CLCF1Q9UBD9 225 aa13.95□□□□□ -0.18
PMS1-213ENST00000441310 hDV102S1A0JD36 115 aa13.95□□□□□ -0.18
PMS1-213ENST00000441310 LRRC30A6NM36 301 aa13.95□□□□□ -0.18
PMS1-213ENST00000441310 MRPL33O75394 65 aaKnown RBP13.95□□□□□ -0.18
PMS1-213ENST00000441310 NPY1RP25929 384 aa13.95□□□□□ -0.18
PMS1-213ENST00000441310 MIC13Q5XKP0 118 aa13.95□□□□□ -0.18
PMS1-213ENST00000441310 MGAQ8IWI9 3026 aa13.94□□□□□ -0.18
PMS1-213ENST00000441310 SMIM21Q3B7S5 101 aa13.94□□□□□ -0.18
PMS1-213ENST00000441310 ZNF808Q8N4W9 903 aaPredicted RBP13.94□□□□□ -0.18
PMS1-213ENST00000441310 FAM173AQ9BQD7 235 aa13.94□□□□□ -0.18
PMS1-213ENST00000441310 TTTY12Q9BZ98 90 aa13.94□□□□□ -0.18
PMS1-213ENST00000441310 DEFB127Q9H1M4 99 aa13.94□□□□□ -0.18
PMS1-213ENST00000441310 AMY1AP04745 511 aa13.94□□□□□ -0.18
PMS1-213ENST00000441310 CD1BP29016 333 aa13.94□□□□□ -0.18
PMS1-213ENST00000441310 SLAQ13239 276 aa13.94□□□□□ -0.18
PMS1-213ENST00000441310 TMEM251Q8N6I4 163 aa13.94□□□□□ -0.18
PMS1-213ENST00000441310 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.94□□□□□ -0.18
PMS1-213ENST00000441310 CXorf1O96002 111 aa13.94□□□□□ -0.18
PMS1-213ENST00000441310 CD46P15529 392 aa13.94□□□□□ -0.18
PMS1-213ENST00000441310 USF1P22415 310 aaPredicted RBP13.94□□□□□ -0.18
PMS1-213ENST00000441310 ARR3P36575 388 aa13.94□□□□□ -0.18
PMS1-213ENST00000441310 IGFBP7Q16270 282 aa13.94□□□□□ -0.18
PMS1-213ENST00000441310 PDLIM3Q53GG5 364 aaPredicted RBP13.94□□□□□ -0.18
PMS1-213ENST00000441310 CENPWQ5EE01 88 aa13.94□□□□□ -0.18
PMS1-213ENST00000441310 PQLC2Q6ZP29 291 aa13.94□□□□□ -0.18
PMS1-213ENST00000441310 RAB1CQ92928 201 aa13.94□□□□□ -0.18
PMS1-213ENST00000441310 CACNA1DQ01668 2161 aa13.93□□□□□ -0.18
PMS1-213ENST00000441310 CA1P00915 261 aaPredicted RBP13.93□□□□□ -0.18
PMS1-213ENST00000441310 LINC00869P0C866 280 aa13.93□□□□□ -0.18
PMS1-213ENST00000441310 STAG3L2P0CL84 134 aa13.93□□□□□ -0.18
PMS1-213ENST00000441310 STAG3L3P0CL85 134 aa13.93□□□□□ -0.18
PMS1-213ENST00000441310 MGST1P10620 155 aaKnown RBP13.93□□□□□ -0.18
PMS1-213ENST00000441310 FAM71F2Q6NXP2 309 aa13.93□□□□□ -0.18
PMS1-213ENST00000441310 SPAARA0A1B0GVQ0 90 aa13.93□□□□□ -0.18
PMS1-213ENST00000441310 OR4C46A6NHA9 309 aa13.93□□□□□ -0.18
PMS1-213ENST00000441310 HLA-DQA1P01909 254 aa13.93□□□□□ -0.18
PMS1-213ENST00000441310 GNG4P50150 75 aa13.93□□□□□ -0.18
PMS1-213ENST00000441310 ZNF718Q3SXZ3 478 aa13.93□□□□□ -0.18
PMS1-213ENST00000441310 SPATA31B1PQ5VZV4 182 aa13.93□□□□□ -0.18
PMS1-213ENST00000441310 SSMEM1Q8WWF3 244 aa13.93□□□□□ -0.18
PMS1-213ENST00000441310 WDR83OSQ9Y284 106 aa13.93□□□□□ -0.18
PMS1-213ENST00000441310 TRAV24A0A0B4J272 114 aa13.92□□□□□ -0.18
PMS1-213ENST00000441310 OR7C2O60412 319 aa13.92□□□□□ -0.18
PMS1-213ENST00000441310 OR8B3Q8NGG8 313 aa13.92□□□□□ -0.18
PMS1-213ENST00000441310 CPT1CQ8TCG5 803 aa13.92□□□□□ -0.18
PMS1-213ENST00000441310 OR8B2Q96RD0 313 aa13.92□□□□□ -0.18
PMS1-213ENST00000441310 TXNDC17Q9BRA2 123 aa13.92□□□□□ -0.18
PMS1-213ENST00000441310 HES4Q9HCC6 221 aa13.92□□□□□ -0.18
PMS1-213ENST00000441310 DEFB124Q8NES8 71 aa13.92□□□□□ -0.18
PMS1-213ENST00000441310 OR2H1Q9GZK4 316 aa13.92□□□□□ -0.18
PMS1-213ENST00000441310 CA6P23280 308 aa13.92□□□□□ -0.18
PMS1-213ENST00000441310 TBR1Q16650 682 aa13.92□□□□□ -0.18
PMS1-213ENST00000441310 VWC2Q2TAL6 325 aa13.92□□□□□ -0.18
PMS1-213ENST00000441310 FER1L6-AS1Q8NA97 138 aa13.92□□□□□ -0.18
PMS1-213ENST00000441310 SCCPDHQ8NBX0 429 aa13.92□□□□□ -0.18
PMS1-213ENST00000441310 C12orf49Q9H741 205 aa13.92□□□□□ -0.18
PMS1-213ENST00000441310 TECRQ9NZ01 308 aaKnown RBP13.92□□□□□ -0.18
PMS1-213ENST00000441310 ABI3Q9P2A4 366 aa13.92□□□□□ -0.18
PMS1-213ENST00000441310 B4GALT7Q9UBV7 327 aa13.92□□□□□ -0.18
PMS1-213ENST00000441310 SH2D7A6NKC9 451 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms