RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 H3BUA1 57 aa13□□□□□ -0.33
CTDSPL-204ENST00000435525 ST8SIA3O43173 380 aa13□□□□□ -0.33
CTDSPL-204ENST00000435525 FBXO24O75426 580 aa13□□□□□ -0.33
CTDSPL-204ENST00000435525 MED6O75586 246 aa13□□□□□ -0.33
CTDSPL-204ENST00000435525 DEFA4P12838 97 aa13□□□□□ -0.33
CTDSPL-204ENST00000435525 HOXA1P49639 335 aaPredicted RBP13□□□□□ -0.33
CTDSPL-204ENST00000435525 PRCDQ00LT1 54 aa13□□□□□ -0.33
CTDSPL-204ENST00000435525 FOXE3Q13461 319 aa13□□□□□ -0.33
CTDSPL-204ENST00000435525 TATDN3Q17R31 274 aa13□□□□□ -0.33
CTDSPL-204ENST00000435525 IZUMO4Q1ZYL8 232 aa13□□□□□ -0.33
CTDSPL-204ENST00000435525 FAM110DQ8TAY7 271 aaPredicted RBP13□□□□□ -0.33
CTDSPL-204ENST00000435525 NDUFA4L2Q9NRX3 87 aa13□□□□□ -0.33
CTDSPL-204ENST00000435525 A0A0G2JRQ6 117 aa12.99□□□□□ -0.33
CTDSPL-204ENST00000435525 C5orf51A6NDU8 294 aa12.99□□□□□ -0.33
CTDSPL-204ENST00000435525 CEBPZOSA8MTT3 80 aa12.99□□□□□ -0.33
CTDSPL-204ENST00000435525 FAM25EA8MYX2 175 aa12.99□□□□□ -0.33
CTDSPL-204ENST00000435525 G3V318 75 aa12.99□□□□□ -0.33
CTDSPL-204ENST00000435525 IGHG4P01861 327 aa12.99□□□□□ -0.33
CTDSPL-204ENST00000435525 PF4V1P10720 104 aa12.99□□□□□ -0.33
CTDSPL-204ENST00000435525 EGR2P11161 476 aaPredicted RBP12.99□□□□□ -0.33
CTDSPL-204ENST00000435525 SSBP2P81877 361 aaPredicted RBP12.99□□□□□ -0.33
CTDSPL-204ENST00000435525 OXA1LQ15070 435 aa12.99□□□□□ -0.33
CTDSPL-204ENST00000435525 GSG1LQ6UXU4 331 aa12.99□□□□□ -0.33
CTDSPL-204ENST00000435525 ZNF329Q86UD4 541 aa12.99□□□□□ -0.33
CTDSPL-204ENST00000435525 OR1L6Q8NGR2 347 aa12.99□□□□□ -0.33
CTDSPL-204ENST00000435525 WFDC12Q8WWY7 111 aa12.99□□□□□ -0.33
CTDSPL-204ENST00000435525 SLA2Q9H6Q3 261 aa12.99□□□□□ -0.33
CTDSPL-204ENST00000435525 FBXO7Q9Y3I1 522 aa12.99□□□□□ -0.33
CTDSPL-204ENST00000435525 C13orf42A0A1B0GVH6 325 aa12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 HMX3A6NHT5 357 aa12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 NPIPB5A8MRT5 1133 aa12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 TEX22C9J3V5 150 aa12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 FAM90A26D6RGX4 464 aa12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 ADAP1O75689 374 aa12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 LY86O95711 162 aa12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 OR13C7P0DN81 318 aa12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 HIST1H1BP16401 226 aaKnown RBP12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 PSMB6P28072 239 aa12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 SNCAP37840 140 aa12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 SUB1P53999 127 aaKnown RBP eCLIP12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 IAH1Q2TAA2 248 aaPredicted RBP12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 AARDQ4LEZ3 155 aa12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 TTC9CQ8N5M4 171 aa12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 OR5T1Q8NG75 326 aa12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 ZNF747Q9BV97 191 aa12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 HIPK2Q9H2X6 1198 aa12.98□□□□□ -0.33
CTDSPL-204ENST00000435525 TCRBV4S1A1TA0A5B7 111 aa12.97□□□□□ -0.33
CTDSPL-204ENST00000435525 WRBO00258 174 aa12.97□□□□□ -0.33
CTDSPL-204ENST00000435525 APELAP0DMC3 54 aa12.97□□□□□ -0.33
CTDSPL-204ENST00000435525 MYOD1P15172 320 aa12.97□□□□□ -0.33
CTDSPL-204ENST00000435525 PPIFP30405 207 aaKnown RBP12.97□□□□□ -0.33
CTDSPL-204ENST00000435525 KHDC1LQ5JSQ8 128 aa12.97□□□□□ -0.33
CTDSPL-204ENST00000435525 SHISA2Q6UWI4 295 aa12.97□□□□□ -0.33
CTDSPL-204ENST00000435525 Q6ZRM9 215 aa12.97□□□□□ -0.33
CTDSPL-204ENST00000435525 NOXA1Q86UR1 476 aa12.97□□□□□ -0.33
CTDSPL-204ENST00000435525 HEYLQ9NQ87 328 aaPredicted RBP12.97□□□□□ -0.33
CTDSPL-204ENST00000435525 ZFP57Q9NU63 452 aa12.97□□□□□ -0.33
CTDSPL-204ENST00000435525 THYN1Q9P016 225 aa12.97□□□□□ -0.33
CTDSPL-204ENST00000435525 GSKIPQ9P0R6 139 aa12.97□□□□□ -0.33
CTDSPL-204ENST00000435525 ATRQ13535 2644 aa12.97□□□□□ -0.33
CTDSPL-204ENST00000435525 A0A0G2JLM5 398 aa12.96□□□□□ -0.33
CTDSPL-204ENST00000435525 C7orf66A4D0T2 115 aa12.96□□□□□ -0.33
CTDSPL-204ENST00000435525 DBX1A6NMT0 343 aa12.96□□□□□ -0.33
CTDSPL-204ENST00000435525 IGLV1-40P01703 118 aa12.96□□□□□ -0.33
CTDSPL-204ENST00000435525 CFHR3Q02985 330 aa12.96□□□□□ -0.33
CTDSPL-204ENST00000435525 TNFRSF9Q07011 255 aa12.96□□□□□ -0.33
CTDSPL-204ENST00000435525 C19orf54Q5BKX5 351 aa12.96□□□□□ -0.33
CTDSPL-204ENST00000435525 CIB3Q96Q77 187 aaPredicted RBP12.96□□□□□ -0.33
CTDSPL-204ENST00000435525 HSPB7Q9UBY9 170 aa12.96□□□□□ -0.33
CTDSPL-204ENST00000435525 ALG5Q9Y673 324 aa12.96□□□□□ -0.33
CTDSPL-204ENST00000435525 IGLC7A0M8Q6 106 aa12.95□□□□□ -0.34
CTDSPL-204ENST00000435525 INS-IGF2F8WCM5 200 aa12.95□□□□□ -0.34
CTDSPL-204ENST00000435525 BRI3O95415 125 aa12.95□□□□□ -0.34
CTDSPL-204ENST00000435525 TRGV3P03979 118 aa12.95□□□□□ -0.34
CTDSPL-204ENST00000435525 CRYGCP07315 174 aa12.95□□□□□ -0.34
CTDSPL-204ENST00000435525 AREGP15514 252 aa12.95□□□□□ -0.34
CTDSPL-204ENST00000435525 NKX2-1P43699 371 aaPredicted RBP12.95□□□□□ -0.34
CTDSPL-204ENST00000435525 TPPP2P59282 170 aa12.95□□□□□ -0.34
CTDSPL-204ENST00000435525 RPP30P78346 268 aaKnown RBP12.95□□□□□ -0.34
CTDSPL-204ENST00000435525 CYCSP99999 105 aaKnown RBP12.95□□□□□ -0.34
CTDSPL-204ENST00000435525 PDLIM3Q53GG5 364 aaPredicted RBP12.95□□□□□ -0.34
CTDSPL-204ENST00000435525 OR10W1Q8NGF6 305 aa12.95□□□□□ -0.34
CTDSPL-204ENST00000435525 C2orf50Q96LR7 162 aa12.95□□□□□ -0.34
CTDSPL-204ENST00000435525 MED28Q9H204 178 aa12.95□□□□□ -0.34
CTDSPL-204ENST00000435525 TSSC4Q9Y5U2 329 aaPredicted RBP12.95□□□□□ -0.34
CTDSPL-204ENST00000435525 E7EUB6 86 aa12.94□□□□□ -0.34
CTDSPL-204ENST00000435525 GOSR2O14653 212 aa12.94□□□□□ -0.34
CTDSPL-204ENST00000435525 PITX3O75364 302 aa12.94□□□□□ -0.34
CTDSPL-204ENST00000435525 CTRB1P17538 263 aa12.94□□□□□ -0.34
CTDSPL-204ENST00000435525 PSMB8P28062 276 aa12.94□□□□□ -0.34
CTDSPL-204ENST00000435525 RAB9AP51151 201 aa12.94□□□□□ -0.34
CTDSPL-204ENST00000435525 SPINK9Q5DT21 86 aa12.94□□□□□ -0.34
CTDSPL-204ENST00000435525 ASPHD1Q5U4P2 390 aa12.94□□□□□ -0.34
CTDSPL-204ENST00000435525 CTRB2Q6GPI1 263 aa12.94□□□□□ -0.34
CTDSPL-204ENST00000435525 OR2C3Q8N628 320 aa12.94□□□□□ -0.34
CTDSPL-204ENST00000435525 ZBTB8BQ8NAP8 495 aaPredicted RBP12.94□□□□□ -0.34
CTDSPL-204ENST00000435525 DTD1Q8TEA8 209 aa12.94□□□□□ -0.34
CTDSPL-204ENST00000435525 WIPF2Q8TF74 440 aaPredicted RBP12.94□□□□□ -0.34
CTDSPL-204ENST00000435525 USMG5Q96IX5 58 aa12.94□□□□□ -0.34
CTDSPL-204ENST00000435525 MS4A10Q96PG2 267 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms