RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 C8orf88P0DMB2 117 aa12.78□□□□□ -0.36
CPSF4-203ENST00000430038 HIST1H1BP16401 226 aaKnown RBP12.78□□□□□ -0.36
CPSF4-203ENST00000430038 LPAR6P43657 344 aa12.78□□□□□ -0.36
CPSF4-203ENST00000430038 CATR1Q13166 79 aa12.78□□□□□ -0.36
CPSF4-203ENST00000430038 BTNL8Q6UX41 500 aa12.78□□□□□ -0.36
CPSF4-203ENST00000430038 SERPINE2P07093 398 aa12.77□□□□□ -0.37
CPSF4-203ENST00000430038 OR13C7P0DN81 318 aa12.77□□□□□ -0.37
CPSF4-203ENST00000430038 PTBP1P26599 531 aaKnown RBP eCLIP12.77□□□□□ -0.37
CPSF4-203ENST00000430038 FAM106AQ4KMX7 169 aa12.77□□□□□ -0.37
CPSF4-203ENST00000430038 ZNF57Q68EA5 555 aaPredicted RBP12.77□□□□□ -0.37
CPSF4-203ENST00000430038 DMBX1Q8NFW5 382 aa12.77□□□□□ -0.37
CPSF4-203ENST00000430038 QTRT1Q9BXR0 403 aaKnown RBP12.77□□□□□ -0.37
CPSF4-203ENST00000430038 COMMD5Q9GZQ3 224 aa12.77□□□□□ -0.37
CPSF4-203ENST00000430038 IFT46Q9NQC8 304 aa12.77□□□□□ -0.37
CPSF4-203ENST00000430038 NDUFA4L2Q9NRX3 87 aa12.77□□□□□ -0.37
CPSF4-203ENST00000430038 BIRC6Q9NR09 4857 aa12.77□□□□□ -0.37
CPSF4-203ENST00000430038 MARCH11A6NNE9 402 aa12.76□□□□□ -0.37
CPSF4-203ENST00000430038 DHFRP00374 187 aa12.76□□□□□ -0.37
CPSF4-203ENST00000430038 KRASP01116 189 aa12.76□□□□□ -0.37
CPSF4-203ENST00000430038 IFNA6P05013 189 aa12.76□□□□□ -0.37
CPSF4-203ENST00000430038 F2RP25116 425 aa12.76□□□□□ -0.37
CPSF4-203ENST00000430038 HLA-DMAP28067 261 aa12.76□□□□□ -0.37
CPSF4-203ENST00000430038 G6PCP35575 357 aa12.76□□□□□ -0.37
CPSF4-203ENST00000430038 HERV-K104P61576 105 aa12.76□□□□□ -0.37
CPSF4-203ENST00000430038 NCS1P62166 190 aa12.76□□□□□ -0.37
CPSF4-203ENST00000430038 TMEM69Q5SWH9 247 aa12.76□□□□□ -0.37
CPSF4-203ENST00000430038 DGCR14Q96DF8 476 aaKnown RBP12.76□□□□□ -0.37
CPSF4-203ENST00000430038 CXorf58Q96LI9 332 aa12.76□□□□□ -0.37
CPSF4-203ENST00000430038 AIFM2Q9BRQ8 373 aa12.76□□□□□ -0.37
CPSF4-203ENST00000430038 CHRDL1Q9BU40 450 aa12.76□□□□□ -0.37
CPSF4-203ENST00000430038 ZNF436Q9C0F3 470 aaPredicted RBP12.76□□□□□ -0.37
CPSF4-203ENST00000430038 COMMD9Q9P000 198 aa12.76□□□□□ -0.37
CPSF4-203ENST00000430038 ALMS1Q8TCU4 4167 aa12.76□□□□□ -0.37
CPSF4-203ENST00000430038 TMEM127O75204 238 aa12.75□□□□□ -0.37
CPSF4-203ENST00000430038 IGKV1-39P01597 117 aa12.75□□□□□ -0.37
CPSF4-203ENST00000430038 IGKV1D-39P04432 117 aa12.75□□□□□ -0.37
CPSF4-203ENST00000430038 TRAPPC2P0DI81 140 aa12.75□□□□□ -0.37
CPSF4-203ENST00000430038 TRAPPC2BP0DI82 140 aa12.75□□□□□ -0.37
CPSF4-203ENST00000430038 ADMP35318 185 aa12.75□□□□□ -0.37
CPSF4-203ENST00000430038 HRH1P35367 487 aa12.75□□□□□ -0.37
CPSF4-203ENST00000430038 GDPD1Q8N9F7 314 aa12.75□□□□□ -0.37
CPSF4-203ENST00000430038 TSPAN14Q8NG11 270 aa12.75□□□□□ -0.37
CPSF4-203ENST00000430038 CD300LFQ8TDQ1 290 aa12.75□□□□□ -0.37
CPSF4-203ENST00000430038 GPX8Q8TED1 209 aa12.75□□□□□ -0.37
CPSF4-203ENST00000430038 SLC25A46Q96AG3 418 aa12.75□□□□□ -0.37
CPSF4-203ENST00000430038 SRSF8Q9BRL6 282 aaKnown RBP12.75□□□□□ -0.37
CPSF4-203ENST00000430038 IGHV3OR16-8A0A075B7F1 116 aa12.74□□□□□ -0.37
CPSF4-203ENST00000430038 OR2T8A6NH00 312 aa12.74□□□□□ -0.37
CPSF4-203ENST00000430038 K7EIM0 57 aa12.74□□□□□ -0.37
CPSF4-203ENST00000430038 TGOLN2O43493 480 aa12.74□□□□□ -0.37
CPSF4-203ENST00000430038 FGF2P09038 288 aa12.74□□□□□ -0.37
CPSF4-203ENST00000430038 PRSS3P35030 304 aa12.74□□□□□ -0.37
CPSF4-203ENST00000430038 PHLDA2Q53GA4 152 aa12.74□□□□□ -0.37
CPSF4-203ENST00000430038 SLC25A24Q6NUK1 477 aa12.74□□□□□ -0.37
CPSF4-203ENST00000430038 PLET1Q6UQ28 207 aa12.74□□□□□ -0.37
CPSF4-203ENST00000430038 CROCCP3Q8IVE0 287 aa12.74□□□□□ -0.37
CPSF4-203ENST00000430038 OR5H2Q8NGV7 314 aa12.74□□□□□ -0.37
CPSF4-203ENST00000430038 VBP1P61758 197 aa12.73□□□□□ -0.37
CPSF4-203ENST00000430038 OR52B4Q8NGK2 314 aa12.73□□□□□ -0.37
CPSF4-203ENST00000430038 OR1L8Q8NGR8 309 aa12.73□□□□□ -0.37
CPSF4-203ENST00000430038 VN1R17PQ8TDU5 208 aa12.73□□□□□ -0.37
CPSF4-203ENST00000430038 SCARB1Q8WTV0 552 aa12.73□□□□□ -0.37
CPSF4-203ENST00000430038 OVOL2Q9BRP0 275 aa12.73□□□□□ -0.37
CPSF4-203ENST00000430038 FUNDC2Q9BWH2 189 aa12.73□□□□□ -0.37
CPSF4-203ENST00000430038 HINT2Q9BX68 163 aa12.73□□□□□ -0.37
CPSF4-203ENST00000430038 COMMD3Q9UBI1 195 aa12.73□□□□□ -0.37
CPSF4-203ENST00000430038 OR51B2Q9Y5P1 312 aa12.73□□□□□ -0.37
CPSF4-203ENST00000430038 F11RQ9Y624 299 aaKnown RBP12.73□□□□□ -0.37
CPSF4-203ENST00000430038 A0A087WXM4 84 aa12.72□□□□□ -0.37
CPSF4-203ENST00000430038 GPR31O00270 319 aa12.72□□□□□ -0.37
CPSF4-203ENST00000430038 ZNF207O43670 478 aaKnown RBP12.72□□□□□ -0.37
CPSF4-203ENST00000430038 ELK1P19419 428 aa12.72□□□□□ -0.37
CPSF4-203ENST00000430038 EWSR1Q01844 656 aaKnown RBP eCLIP12.72□□□□□ -0.37
CPSF4-203ENST00000430038 OR6F1Q8NGZ6 308 aa12.72□□□□□ -0.37
CPSF4-203ENST00000430038 TMEM190Q8WZ59 177 aa12.72□□□□□ -0.37
CPSF4-203ENST00000430038 NAA50Q9GZZ1 169 aaKnown RBP12.72□□□□□ -0.37
CPSF4-203ENST00000430038 MRPL27Q9P0M9 148 aaKnown RBP12.72□□□□□ -0.37
CPSF4-203ENST00000430038 HPGDSO60760 199 aa12.71□□□□□ -0.37
CPSF4-203ENST00000430038 TAS2R46P59540 309 aa12.71□□□□□ -0.37
CPSF4-203ENST00000430038 IZUMO4Q1ZYL8 232 aa12.71□□□□□ -0.37
CPSF4-203ENST00000430038 SLC16A13Q7RTY0 426 aa12.71□□□□□ -0.37
CPSF4-203ENST00000430038 SNX29P2Q8IUI4 249 aa12.71□□□□□ -0.37
CPSF4-203ENST00000430038 CADM3Q8N126 398 aa12.71□□□□□ -0.37
CPSF4-203ENST00000430038 SEC22AQ96IW7 307 aa12.71□□□□□ -0.37
CPSF4-203ENST00000430038 TMEM14BQ9NUH8 114 aa12.71□□□□□ -0.37
CPSF4-203ENST00000430038 UBQLN2Q9UHD9 624 aa12.71□□□□□ -0.37
CPSF4-203ENST00000430038 CTSGP08311 255 aa12.7□□□□□ -0.38
CPSF4-203ENST00000430038 ELLP55199 621 aaPredicted RBP12.7□□□□□ -0.38
CPSF4-203ENST00000430038 ERVK-16P61578 105 aa12.7□□□□□ -0.38
CPSF4-203ENST00000430038 TBC1D26Q86UD7 250 aa12.7□□□□□ -0.38
CPSF4-203ENST00000430038 LSM10Q969L4 123 aaKnown RBP12.7□□□□□ -0.38
CPSF4-203ENST00000430038 C5orf66Q9H5L9 145 aa12.7□□□□□ -0.38
CPSF4-203ENST00000430038 THYN1Q9P016 225 aa12.7□□□□□ -0.38
CPSF4-203ENST00000430038 UFC1Q9Y3C8 167 aa12.7□□□□□ -0.38
CPSF4-203ENST00000430038 TRAV25A0A0B4J276 109 aa12.69□□□□□ -0.38
CPSF4-203ENST00000430038 C15orf61A6NNL5 157 aa12.69□□□□□ -0.38
CPSF4-203ENST00000430038 M0QYG6 137 aa12.69□□□□□ -0.38
CPSF4-203ENST00000430038 IGHV3-48P01763 117 aa12.69□□□□□ -0.38
CPSF4-203ENST00000430038 ODF3L2Q3SX64 289 aa12.69□□□□□ -0.38
CPSF4-203ENST00000430038 THOC7Q6I9Y2 204 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms