RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 LIME1Q9H400 295 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 MAP1LC3AQ9H492 121 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 FBRSQ9HAH7 460 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 SPANXB1Q9NS25 103 aaPredicted RBP4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 TECRQ9NZ01 308 aaKnown RBP4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 OR1A1Q9P1Q5 309 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 SCN10AQ9Y5Y9 1956 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 A0A087X0K7 114 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 A0A1W2PRD5 423 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 A0A1W2PRF3 423 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 A0A1W2PRM7 423 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 TMEM213A2RRL7 107 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 PRR19A6NJB7 356 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 MS4A18H0YCH9 400 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 KIR2DS3K7RE56 304 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 CHEK1O14757 476 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 FOXS1O43638 330 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 CLDN14O95500 239 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 CELA3BP08861 270 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 LINC00271P0C7V0 271 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 NPPCP23582 126 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 MLF1P58340 268 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 FGF12P61328 243 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 MS4A18Q3C1V0 323 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 C10orf128Q5T292 105 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 INO80CQ6PI98 192 aaPredicted RBP4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 CXCL17Q6UXB2 119 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 H2BFWTQ7Z2G1 175 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 TMEM25Q86YD3 366 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 SPACA3Q8IXA5 215 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 Q8IYB0 196 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 TEX45Q8NA69 505 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 SMRP1Q8NCR6 262 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 MBD6Q96DN6 1003 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 CDX2Q99626 313 aaPredicted RBP4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 SLC25A2Q9BXI2 301 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 CCL28Q9NRJ3 127 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 AP5S1Q9NUS5 200 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 MTCH1Q9NZJ7 389 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 PSG8Q9UQ74 426 aa4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 MRPS17Q9Y2R5 130 aaKnown RBP4.68□□□□□ -1.66
VTI1BP4-201ENST00000427516 OBSL1O75147 1896 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 TRBV20OR9-2A0A075B6H5 130 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 KIR2DS5A0A0G2JLQ3 304 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 A0A0G2JNG1 304 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 CENPVL3A0A0U1RRI6 287 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 LOC101059948A0A1B0GTJ6 334 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 hDV102S1A0JD36 115 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 FBLL1A6NHQ2 334 aaKnown RBP4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 PRR33A8MZF0 331 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 F2Z2F3 143 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 K7EN84 100 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 TNFSF12O43508 249 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 FOXH1O75593 365 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 IGLV1-40P01703 118 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 IGHV3-7P01780 117 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 CA3P07451 260 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 POU2F2P09086 479 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 BCL3P20749 454 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 CD38P28907 300 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 ERVK-16P61578 105 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 RPL30P62888 115 aaKnown RBP4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 RPL32P62910 135 aaKnown RBP4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 HERV-K104P63124 156 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 SRYQ05066 204 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 ARL16Q0P5N6 197 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 KIR2DS5Q14953 304 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 PDCD1Q15116 288 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 TRIP6Q15654 476 aaKnown RBP4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 NNATQ16517 81 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 LY6G5CQ5SRR4 150 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 TMEM42Q69YG0 159 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 Q6Q795 121 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 TEPPQ6URK8 271 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 FOXL2NBQ6ZUU3 175 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 C1QL2Q7Z5L3 287 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 RPRMLQ8N4K4 120 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 PPP1R35Q8TAP8 253 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 CYB5D2Q8WUJ1 264 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 GTSF1Q8WW33 167 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 NUDT22Q9BRQ3 303 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 TPPP3Q9BW30 176 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 DEC1Q9P2X7 70 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 IL36RNQ9UBH0 155 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 RARRES3Q9UL19 164 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 RNF114Q9Y508 228 aa4.67□□□□□ -1.66
VTI1BP4-201ENST00000427516 CPAMD8Q8IZJ3 1885 aa4.66□□□□□ -1.66
VTI1BP4-201ENST00000427516 TRBV20-1A0A075B6N2 111 aa4.66□□□□□ -1.66
VTI1BP4-201ENST00000427516 CCL15-CCL14A0A0B4J2E2 113 aa4.66□□□□□ -1.66
VTI1BP4-201ENST00000427516 C21orf140B9A014 251 aa4.66□□□□□ -1.66
VTI1BP4-201ENST00000427516 FCN3O75636 299 aa4.66□□□□□ -1.66
VTI1BP4-201ENST00000427516 SNCGO76070 127 aa4.66□□□□□ -1.66
VTI1BP4-201ENST00000427516 NXPH3O95157 252 aa4.66□□□□□ -1.66
VTI1BP4-201ENST00000427516 CNIH1O95406 144 aa4.66□□□□□ -1.66
VTI1BP4-201ENST00000427516 CEACAM5P06731 702 aa4.66□□□□□ -1.66
VTI1BP4-201ENST00000427516 IGFBP2P18065 325 aa4.66□□□□□ -1.66
VTI1BP4-201ENST00000427516 GABRG2P18507 467 aa4.66□□□□□ -1.66
VTI1BP4-201ENST00000427516 EVI2AP22794 236 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms