RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 COPZ2Q9P299 210 aa20.24■□□□□ 0.83
CDK9-202ENST00000421939 KLK9Q9UKQ9 250 aa20.24■□□□□ 0.83
CDK9-202ENST00000421939 PRNDQ9UKY0 176 aa20.24■□□□□ 0.83
CDK9-202ENST00000421939 OR51B2Q9Y5P1 312 aa20.24■□□□□ 0.83
CDK9-202ENST00000421939 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.23■□□□□ 0.83
CDK9-202ENST00000421939 TEX50A0A1B0GTY4 177 aa20.23■□□□□ 0.83
CDK9-202ENST00000421939 ANKRD20A5PA0PJZ0 165 aa20.23■□□□□ 0.83
CDK9-202ENST00000421939 TRAPPC2P0DI81 140 aa20.23■□□□□ 0.83
CDK9-202ENST00000421939 TRAPPC2BP0DI82 140 aa20.23■□□□□ 0.83
CDK9-202ENST00000421939 KLF5Q13887 457 aaPredicted RBP20.23■□□□□ 0.83
CDK9-202ENST00000421939 RPEL1Q2QD12 228 aa20.23■□□□□ 0.83
CDK9-202ENST00000421939 FAM209BQ5JX69 171 aa20.23■□□□□ 0.83
CDK9-202ENST00000421939 HSD17B13Q7Z5P4 300 aaPredicted RBP20.23■□□□□ 0.83
CDK9-202ENST00000421939 CCDC71LQ8N9Z2 235 aa20.23■□□□□ 0.83
CDK9-202ENST00000421939 OR10W1Q8NGF6 305 aa20.23■□□□□ 0.83
CDK9-202ENST00000421939 ELOVL1Q9BW60 279 aa20.23■□□□□ 0.83
CDK9-202ENST00000421939 IGLV11-55A0A075B6I3 123 aa20.22■□□□□ 0.83
CDK9-202ENST00000421939 C15orf61A6NNL5 157 aa20.22■□□□□ 0.83
CDK9-202ENST00000421939 BMPR1BO00238 502 aa20.22■□□□□ 0.83
CDK9-202ENST00000421939 NDUFB8O95169 186 aa20.22■□□□□ 0.83
CDK9-202ENST00000421939 CTSDP07339 412 aaPredicted RBP20.22■□□□□ 0.83
CDK9-202ENST00000421939 SYNJ2BPP57105 145 aa20.22■□□□□ 0.83
CDK9-202ENST00000421939 H2BFWTQ7Z2G1 175 aa20.22■□□□□ 0.83
CDK9-202ENST00000421939 OR4C12Q96R67 309 aa20.22■□□□□ 0.83
CDK9-202ENST00000421939 PRR25Q96S07 402 aa20.22■□□□□ 0.83
CDK9-202ENST00000421939 TP53RKQ96S44 253 aa20.22■□□□□ 0.83
CDK9-202ENST00000421939 NDUFA4L2Q9NRX3 87 aa20.22■□□□□ 0.83
CDK9-202ENST00000421939 TMEM14BQ9NUH8 114 aa20.22■□□□□ 0.83
CDK9-202ENST00000421939 ZNF256Q9Y2P7 627 aaPredicted RBP20.22■□□□□ 0.83
CDK9-202ENST00000421939 DEFB121Q5J5C9 76 aa20.21■□□□□ 0.83
CDK9-202ENST00000421939 OR5B3Q8NH48 314 aa20.21■□□□□ 0.83
CDK9-202ENST00000421939 HINT2Q9BX68 163 aa20.21■□□□□ 0.83
CDK9-202ENST00000421939 FKBP11Q9NYL4 201 aa20.21■□□□□ 0.83
CDK9-202ENST00000421939 C3orf85A0A1B0GTC6 90 aa20.2■□□□□ 0.82
CDK9-202ENST00000421939 DBX1A6NMT0 343 aa20.2■□□□□ 0.82
CDK9-202ENST00000421939 S100A5P33763 92 aa20.2■□□□□ 0.82
CDK9-202ENST00000421939 WT1-ASQ06250 92 aa20.2■□□□□ 0.82
CDK9-202ENST00000421939 DCTN2Q13561 401 aaKnown RBP20.2■□□□□ 0.82
CDK9-202ENST00000421939 SURF2Q15527 256 aaPredicted RBP20.2■□□□□ 0.82
CDK9-202ENST00000421939 GDPD1Q8N9F7 314 aa20.2■□□□□ 0.82
CDK9-202ENST00000421939 OR9G4Q8NGQ1 327 aa20.2■□□□□ 0.82
CDK9-202ENST00000421939 OR6Q1Q8NGQ2 317 aa20.2■□□□□ 0.82
CDK9-202ENST00000421939 LSM10Q969L4 123 aaKnown RBP20.2■□□□□ 0.82
CDK9-202ENST00000421939 PRRT1Q99946 306 aa20.2■□□□□ 0.82
CDK9-202ENST00000421939 C14orf166Q9Y224 244 aaKnown RBP20.2■□□□□ 0.82
CDK9-202ENST00000421939 LY86O95711 162 aa20.19■□□□□ 0.82
CDK9-202ENST00000421939 OR13C7P0DN81 318 aa20.19■□□□□ 0.82
CDK9-202ENST00000421939 TATDN3Q17R31 274 aa20.19■□□□□ 0.82
CDK9-202ENST00000421939 SLC2A8Q9NY64 477 aa20.19■□□□□ 0.82
CDK9-202ENST00000421939 V9GYH0 126 aa20.19■□□□□ 0.82
CDK9-202ENST00000421939 OR51S1Q8NGJ8 323 aa20.18■□□□□ 0.82
CDK9-202ENST00000421939 OR4A16Q8NH70 328 aa20.18■□□□□ 0.82
CDK9-202ENST00000421939 EEF1AKMT3Q96AZ1 226 aa20.18■□□□□ 0.82
CDK9-202ENST00000421939 CCDC140Q96MF4 163 aa20.18■□□□□ 0.82
CDK9-202ENST00000421939 THAP7Q9BT49 309 aaPredicted RBP20.18■□□□□ 0.82
CDK9-202ENST00000421939 DMRT1Q9Y5R6 373 aa20.18■□□□□ 0.82
CDK9-202ENST00000421939 S4R3C0 116 aa20.18■□□□□ 0.82
CDK9-202ENST00000421939 PPP5D1E7EU14 171 aa20.17■□□□□ 0.82
CDK9-202ENST00000421939 CYB5BO43169 146 aa20.17■□□□□ 0.82
CDK9-202ENST00000421939 B3GALNT1O75752 331 aa20.17■□□□□ 0.82
CDK9-202ENST00000421939 IGHV3-23P01764 117 aa20.17■□□□□ 0.82
CDK9-202ENST00000421939 TRIM16LQ309B1 348 aa20.17■□□□□ 0.82
CDK9-202ENST00000421939 PYDC2Q56P42 97 aa20.17■□□□□ 0.82
CDK9-202ENST00000421939 TRIM63Q969Q1 353 aa20.17■□□□□ 0.82
CDK9-202ENST00000421939 CXorf58Q96LI9 332 aa20.17■□□□□ 0.82
CDK9-202ENST00000421939 TMEM56Q96MV1 263 aa20.17■□□□□ 0.82
CDK9-202ENST00000421939 RTBDNQ9BSG5 229 aaPredicted RBP20.17■□□□□ 0.82
CDK9-202ENST00000421939 SORL1Q92673 2214 aa20.17■□□□□ 0.82
CDK9-202ENST00000421939 MFSD2BA6NFX1 497 aa20.16■□□□□ 0.82
CDK9-202ENST00000421939 ATG12O94817 140 aa20.16■□□□□ 0.82
CDK9-202ENST00000421939 IGKV1-5P01602 117 aa20.16■□□□□ 0.82
CDK9-202ENST00000421939 UCP1P25874 307 aa20.16■□□□□ 0.82
CDK9-202ENST00000421939 MECP2P51608 486 aaKnown RBP20.16■□□□□ 0.82
CDK9-202ENST00000421939 AKR1C2P52895 323 aa20.16■□□□□ 0.82
CDK9-202ENST00000421939 SP6Q3SY56 376 aa20.16■□□□□ 0.82
CDK9-202ENST00000421939 C5orf66Q9H5L9 145 aa20.16■□□□□ 0.82
CDK9-202ENST00000421939 MCUBQ9NWR8 336 aa20.16■□□□□ 0.82
CDK9-202ENST00000421939 THYN1Q9P016 225 aa20.16■□□□□ 0.82
CDK9-202ENST00000421939 SCP2D1Q9UJQ7 156 aa20.16■□□□□ 0.82
CDK9-202ENST00000421939 SPNP16150 400 aa20.15■□□□□ 0.82
CDK9-202ENST00000421939 ZNF79Q15937 498 aa20.15■□□□□ 0.82
CDK9-202ENST00000421939 CLEC19AQ6UXS0 136 aa20.15■□□□□ 0.82
CDK9-202ENST00000421939 IL34Q6ZMJ4 242 aa20.15■□□□□ 0.82
CDK9-202ENST00000421939 CCDC190Q86UF4 302 aa20.15■□□□□ 0.82
CDK9-202ENST00000421939 HAPLN4Q86UW8 402 aa20.15■□□□□ 0.82
CDK9-202ENST00000421939 Q8N402 240 aa20.15■□□□□ 0.82
CDK9-202ENST00000421939 GPR132Q9UNW8 380 aa20.15■□□□□ 0.82
CDK9-202ENST00000421939 F11RQ9Y624 299 aaKnown RBP20.15■□□□□ 0.82
CDK9-202ENST00000421939 TRBV7-1A0A0A6YYK4 115 aa20.14■□□□□ 0.81
CDK9-202ENST00000421939 GGCTO75223 188 aaKnown RBP20.14■□□□□ 0.81
CDK9-202ENST00000421939 IGLV1-51P01701 117 aa20.14■□□□□ 0.81
CDK9-202ENST00000421939 P0C879 139 aa20.14■□□□□ 0.81
CDK9-202ENST00000421939 IZUMO4Q1ZYL8 232 aa20.14■□□□□ 0.81
CDK9-202ENST00000421939 NAA60Q9H7X0 242 aa20.14■□□□□ 0.81
CDK9-202ENST00000421939 TEX13DA0A0J9YY54 714 aaPredicted RBP20.13■□□□□ 0.81
CDK9-202ENST00000421939 HLA-AP01891 365 aaKnown RBP20.13■□□□□ 0.81
CDK9-202ENST00000421939 OR5AC1P0C628 307 aa20.13■□□□□ 0.81
CDK9-202ENST00000421939 ARL3P36405 182 aa20.13■□□□□ 0.81
CDK9-202ENST00000421939 KLF9Q13886 244 aaPredicted RBP20.13■□□□□ 0.81
CDK9-202ENST00000421939 TMEM222Q9H0R3 208 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms