RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 ZNF695Q8IW36 515 aa3.89□□□□□ -1.79
PTP4A1P1-201ENST00000420539 LYG1Q8N1E2 194 aa3.89□□□□□ -1.79
PTP4A1P1-201ENST00000420539 ZNF525Q8N782 197 aa3.89□□□□□ -1.79
PTP4A1P1-201ENST00000420539 OR8A1Q8NGG7 326 aa3.89□□□□□ -1.79
PTP4A1P1-201ENST00000420539 H1FXQ92522 213 aaKnown RBP3.89□□□□□ -1.79
PTP4A1P1-201ENST00000420539 TMEM106AQ96A25 262 aa3.89□□□□□ -1.79
PTP4A1P1-201ENST00000420539 ZC2HC1AQ96GY0 325 aa3.89□□□□□ -1.79
PTP4A1P1-201ENST00000420539 AP1S3Q96PC3 154 aa3.89□□□□□ -1.79
PTP4A1P1-201ENST00000420539 ZNF471Q9BX82 626 aaPredicted RBP3.89□□□□□ -1.79
PTP4A1P1-201ENST00000420539 EFCAB1Q9HAE3 211 aa3.89□□□□□ -1.79
PTP4A1P1-201ENST00000420539 TAF9BQ9HBM6 251 aa3.89□□□□□ -1.79
PTP4A1P1-201ENST00000420539 SDF2L1Q9HCN8 221 aa3.89□□□□□ -1.79
PTP4A1P1-201ENST00000420539 SCRT2Q9NQ03 307 aa3.89□□□□□ -1.79
PTP4A1P1-201ENST00000420539 NAT8Q9UHE5 227 aa3.89□□□□□ -1.79
PTP4A1P1-201ENST00000420539 TRIP11Q15643 1979 aa3.89□□□□□ -1.79
PTP4A1P1-201ENST00000420539 RB1CC1Q8TDY2 1594 aa3.89□□□□□ -1.79
PTP4A1P1-201ENST00000420539 PHLPP1O60346 1717 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 TLCD2A6NGC4 264 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 C9JCJ5 164 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 H0YJW9 148 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 LY6LH3BQJ8 138 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 UBE2L6O14933 153 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 LYZL6O75951 148 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 CFC1BP0CG36 223 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 LINC00694P0DN24 101 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 CSRP1P21291 193 aaKnown RBP3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 FGF7P21781 194 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 NFYBP25208 207 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 UBE2AP49459 152 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 ZNF80P51504 273 aaPredicted RBP3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 COPZ1P61923 177 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 PPP3R1P63098 170 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 RRN3P1Q2M238 152 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 ZNF181Q2M3W8 571 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 VMA21Q3ZAQ7 101 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 CCSMST1Q4G0I0 132 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 TIFABQ6ZNK6 161 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 PACRGLQ8N7B6 248 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 Q8N7P7 452 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 KLHL30-AS1Q8NEE0 82 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 OR5C1Q8NGR4 320 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 RNASE6Q93091 150 aaKnown RBP3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 HIST1H2BAQ96A08 127 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 ZNF799Q96GE5 643 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 NRTNQ99748 197 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 PYGO2Q9BRQ0 406 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 CST9LQ9H4G1 147 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 RNF122Q9H9V4 155 aa3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 TCF20Q9UGU0 1960 aaKnown RBP3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 TET2Q6N021 2002 aaPredicted RBP3.88□□□□□ -1.79
PTP4A1P1-201ENST00000420539 ERBINQ96RT1 1412 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 TRAV38-1A0A0B4J264 116 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 IGHV5-51A0A0C4DH38 117 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 IGHV7-4-1A0A0J9YVY3 117 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 IGHV5-10-1A0A0J9YXX1 117 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 ARRDC5A6NEK1 342 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 SRRM5B3KS81 715 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 TAX1BP3O14907 124 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 IGKV1-5P01602 117 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 ZNF32P17041 273 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 ELK1P19419 428 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 CASP1P29466 404 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 TMEM244Q5VVB8 128 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 C1orf140Q5VVS0 124 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 GLIPR1L1Q6UWM5 242 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 H1FOOQ8IZA3 346 aaPredicted RBP3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 RPP25LQ8N5L8 163 aaKnown RBP3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 TCTEX1D1Q8N7M0 179 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 OR51A4Q8NGJ6 313 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 OR4K13Q8NH42 304 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 DCANP1Q8TF63 244 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 HDHD3Q9BSH5 251 aaPredicted RBP3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 FAIMQ9NVQ4 179 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 CKLFQ9UBR5 152 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 MCTS1Q9ULC4 181 aaKnown RBP3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 ZFP30Q9Y2G7 519 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 MOB4Q9Y3A3 225 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 RALGAPA2Q2PPJ7 1873 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 ZNF609O15014 1411 aa3.87□□□□□ -1.79
PTP4A1P1-201ENST00000420539 CEP170Q5SW79 1584 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 IGHV3OR15-7A0A075B7D8 119 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 A8MWL6 223 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 I3L521 148 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 IGLV3-25P01717 112 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 GPX1P07203 203 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 PAEPP09466 180 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 ZNF688P0C7X2 276 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 IGLC6P0CF74 106 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 HIST1H2BOP23527 126 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 HIST1H2BBP33778 126 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 NUDT2P50583 147 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 RAB5CP51148 216 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 HIST1H2BDP58876 126 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 TAS2R20P59543 309 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 HIST1H2BCP62807 126 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 HIST2H2BEQ16778 126 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 SP6Q3SY56 376 aa3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.86□□□□□ -1.79
PTP4A1P1-201ENST00000420539 AMMECR1LQ6DCA0 310 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms