RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 GEMIN7Q9H840 131 aaKnown RBP10.18□□□□□ -0.78
UBR4-205ENST00000417040 C12orf77C9JDV5 145 aa10.17□□□□□ -0.78
UBR4-205ENST00000417040 PLAURQ03405 335 aa10.17□□□□□ -0.78
UBR4-205ENST00000417040 ATP5G2Q06055 141 aa10.17□□□□□ -0.78
UBR4-205ENST00000417040 A0A0A6YYD4 124 aa10.17□□□□□ -0.78
UBR4-205ENST00000417040 IGKV1D-13A0A0B4J2D9 117 aa10.17□□□□□ -0.78
UBR4-205ENST00000417040 IGKV1-13P0DP09 117 aa10.17□□□□□ -0.78
UBR4-205ENST00000417040 OR13A1Q8NGR1 328 aa10.17□□□□□ -0.78
UBR4-205ENST00000417040 HIST1H2BLQ99880 126 aa10.17□□□□□ -0.78
UBR4-205ENST00000417040 TM2D1Q9BX74 207 aa10.17□□□□□ -0.78
UBR4-205ENST00000417040 DUSP15Q9H1R2 295 aaPredicted RBP10.17□□□□□ -0.78
UBR4-205ENST00000417040 NHP2Q9NX24 153 aaKnown RBP10.17□□□□□ -0.78
UBR4-205ENST00000417040 NBEAP1P0C6P0 100 aa10.17□□□□□ -0.78
UBR4-205ENST00000417040 OR5A1Q8NGJ0 315 aa10.17□□□□□ -0.78
UBR4-205ENST00000417040 ZNF236Q9UL36 1845 aa10.17□□□□□ -0.78
UBR4-205ENST00000417040 EVI2AP22794 236 aa10.17□□□□□ -0.78
UBR4-205ENST00000417040 CIRBPQ14011 172 aaKnown RBP10.17□□□□□ -0.78
UBR4-205ENST00000417040 HEPN1Q6WQI6 88 aa10.17□□□□□ -0.78
UBR4-205ENST00000417040 LSM4Q9Y4Z0 139 aaKnown RBP10.17□□□□□ -0.78
UBR4-205ENST00000417040 A0A1B0GTI1 187 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 NPFFO15130 113 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 CHRNA10Q9GZZ6 450 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 SYNGR3O43761 229 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 TTC9CQ8N5M4 171 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 SCARF2Q96GP6 870 aaPredicted RBP10.16□□□□□ -0.78
UBR4-205ENST00000417040 DUX5Q96PT3 197 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 IFI27L2Q9H2X8 130 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 A0A0G2JMM0 328 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 A0A1W2PPB8 328 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 A0A1W2PRS3 328 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 KIR3DP1A8MWS1 328 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 SUMO2P61956 95 aaKnown RBP10.16□□□□□ -0.78
UBR4-205ENST00000417040 DMRTC2Q8IXT2 367 aaPredicted RBP10.16□□□□□ -0.78
UBR4-205ENST00000417040 NUP37Q8NFH4 326 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 MOB4Q9Y3A3 225 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 HS3ST3B1Q9Y662 390 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 SCN4AP35499 1836 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 CNTRLQ7Z7A1 2325 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 RNASE4P34096 147 aaKnown RBP10.16□□□□□ -0.78
UBR4-205ENST00000417040 MEF2CQ06413 473 aaPredicted RBP10.16□□□□□ -0.78
UBR4-205ENST00000417040 FADS6Q8N9I5 356 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 Q9H3A6 140 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 FOXD3Q9UJU5 478 aaPredicted RBP10.16□□□□□ -0.78
UBR4-205ENST00000417040 NEUROG3Q9Y4Z2 214 aa10.16□□□□□ -0.78
UBR4-205ENST00000417040 TRAV8-2A0A0B4J237 113 aa10.15□□□□□ -0.78
UBR4-205ENST00000417040 CEACAM1P13688 526 aa10.15□□□□□ -0.78
UBR4-205ENST00000417040 HIST3H2BBQ8N257 126 aa10.15□□□□□ -0.78
UBR4-205ENST00000417040 OR5AN1Q8NGI8 311 aa10.15□□□□□ -0.78
UBR4-205ENST00000417040 LYZL4Q96KX0 146 aa10.15□□□□□ -0.78
UBR4-205ENST00000417040 COLCA2A8K830 154 aa10.15□□□□□ -0.78
UBR4-205ENST00000417040 FXYD7P58549 80 aa10.15□□□□□ -0.78
UBR4-205ENST00000417040 ACP7Q6ZNF0 438 aa10.15□□□□□ -0.78
UBR4-205ENST00000417040 RNASEH2CQ8TDP1 164 aaKnown RBP10.15□□□□□ -0.78
UBR4-205ENST00000417040 KIR2DL4Q99706 377 aa10.15□□□□□ -0.78
UBR4-205ENST00000417040 CRIM1Q9NZV1 1036 aa10.15□□□□□ -0.78
UBR4-205ENST00000417040 TMEM262E9PQX1 116 aa10.15□□□□□ -0.78
UBR4-205ENST00000417040 IGFBP3P17936 291 aaPredicted RBP10.15□□□□□ -0.78
UBR4-205ENST00000417040 RTN4RL2Q86UN3 420 aa10.15□□□□□ -0.78
UBR4-205ENST00000417040 FBXL15Q9H469 300 aa10.15□□□□□ -0.78
UBR4-205ENST00000417040 ELOVL5Q9NYP7 299 aa10.15□□□□□ -0.78
UBR4-205ENST00000417040 FAM181BA6NEQ2 426 aa10.15□□□□□ -0.78
UBR4-205ENST00000417040 DDB2Q92466 427 aa10.15□□□□□ -0.78
UBR4-205ENST00000417040 IGKV1D-8A0A087WSZ0 117 aa10.15□□□□□ -0.79
UBR4-205ENST00000417040 CELA3BP08861 270 aa10.15□□□□□ -0.79
UBR4-205ENST00000417040 PPIFP30405 207 aaKnown RBP10.15□□□□□ -0.79
UBR4-205ENST00000417040 A0A1W2PS18 150 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 PTGDSP41222 190 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 FAM71F2Q6NXP2 309 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 OR52E5Q8NH55 327 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 F8VVB4 439 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 F8VWA3 439 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 PYYP10082 97 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 SFTPCP11686 197 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 GPX4P36969 197 aaPredicted RBP10.14□□□□□ -0.79
UBR4-205ENST00000417040 PCOLCEQ15113 449 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 KIR3DL3Q8N743 410 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 GLMPQ8WWB7 406 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 MTURNQ8N3F0 131 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 SMRP1Q8NCR6 262 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 OCC1Q8TAD7 63 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 PLPPR1Q8TBJ4 325 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 FMC1Q96HJ9 113 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 REG4Q9BYZ8 158 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 TMEM106BQ9NUM4 274 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 HAX1O00165 279 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 FAM159AQ6UWV7 190 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 C19orf24Q9BVV8 132 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 PRDM13Q9H4Q3 707 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 A0A1B0GUT8 65 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 C19orf67A6NJJ6 358 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 C5orf67F2Z3F1 127 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 DNAL4O96015 105 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 AMBPP02760 352 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 LRTM2Q8N967 370 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 NUDT10Q8NFP7 164 aa10.14□□□□□ -0.79
UBR4-205ENST00000417040 NPPCP23582 126 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 TUBA4BQ9H853 241 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 IGHV3-64A0A075B6Q5 118 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 TRAV30A0A087WSZ9 112 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 GZMBP10144 247 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms