RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 S4R3C0 116 aa5.97□□□□□ -1.45
CPSF4-202ENST00000412686 WNK1Q9H4A3 2382 aa5.96□□□□□ -1.45
CPSF4-202ENST00000412686 ANKRD34BA5PLL1 514 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 C15orf61A6NNL5 157 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 SNAPC5O75971 98 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 NDUFB8O95169 186 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 TRBV12-3P01733 135 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 IGHV3-23P01764 117 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 LGALS1P09382 135 aaKnown RBP5.96□□□□□ -1.46
CPSF4-202ENST00000412686 CTRB1P17538 263 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 CD33P20138 364 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 PSMB6P28072 239 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 MYCNOSP40205 109 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 SLURP1P55000 103 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 RHOGP84095 191 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 WT1-ASQ06250 92 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 TMEM187Q14656 261 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 TMEM268Q5VZI3 342 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 CTRB2Q6GPI1 263 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 Q6ZRM9 215 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 SELENOHQ8IZQ5 122 aaKnown RBP5.96□□□□□ -1.46
CPSF4-202ENST00000412686 TTC9CQ8N5M4 171 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 TMEM68Q96MH6 324 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 FANCD2OSQ96PS1 177 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 TMEM222Q9H0R3 208 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 SLA2Q9H6Q3 261 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 BATF3Q9NR55 127 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 NDUFA4L2Q9NRX3 87 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 FLVCR2Q9UPI3 526 aa5.96□□□□□ -1.46
CPSF4-202ENST00000412686 TRRAPQ9Y4A5 3859 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 TRBV9A0A0B4J1U6 114 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 A0A0B4J293 547 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 NPIPB5A8MRT5 1133 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 H3BUA1 57 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 ST8SIA3O43173 380 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 NDUFB6O95139 128 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 NXPH3O95157 252 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 CDS2O95674 445 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 CRYGCP07315 174 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 TRAPPC2P0DI81 140 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 TRAPPC2BP0DI82 140 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 OR13C7P0DN81 318 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 CD40LGP29965 261 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 MFAP2P55001 183 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 IFITM3Q01628 133 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 PPP1R1AQ13522 171 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 FHL3Q13643 280 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 C11orf87Q6NUJ2 197 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 SGPP2Q8IWX5 399 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 SLC35G3Q8N808 338 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 WFDC9Q8NEX5 89 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 OR1L8Q8NGR8 309 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 OR1N2Q8NGR9 330 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 OR4A16Q8NH70 328 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 RNASE11Q8TAA1 199 aaKnown RBP5.95□□□□□ -1.46
CPSF4-202ENST00000412686 GPR146Q96CH1 333 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 GALNT14Q96FL9 552 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 SCGB3A2Q96PL1 93 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 SLC25A21Q9BQT8 299 aaPredicted RBP5.95□□□□□ -1.46
CPSF4-202ENST00000412686 TMEM14BQ9NUH8 114 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 PRNDQ9UKY0 176 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 ZNF257Q9Y2Q1 563 aa5.95□□□□□ -1.46
CPSF4-202ENST00000412686 IGLV11-55A0A075B6I3 123 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 IGHV3-21A0A0B4J1V1 117 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 C13orf42A0A1B0GVH6 325 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 NAP1L6A6NFF2 107 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 MFSD2BA6NFX1 497 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 LYRM1O43325 122 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 BRI3O95415 125 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 PRB2P02812 416 aaPredicted RBP5.94□□□□□ -1.46
CPSF4-202ENST00000412686 ANXA7P20073 488 aaKnown RBP5.94□□□□□ -1.46
CPSF4-202ENST00000412686 VAMP1P23763 118 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 SLC6A1P30531 599 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 MECP2P51608 486 aaKnown RBP5.94□□□□□ -1.46
CPSF4-202ENST00000412686 RUNX1Q01196 453 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 DHODHQ02127 395 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 ZNF616Q08AN1 781 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 EXOSC2Q13868 293 aaKnown RBP5.94□□□□□ -1.46
CPSF4-202ENST00000412686 RBMS2Q15434 407 aaKnown RBP5.94□□□□□ -1.46
CPSF4-202ENST00000412686 C15orf32Q32M92 178 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 ANKRD55Q3KP44 614 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 LINC00299Q6ZSB3 139 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 LYZL2Q7Z4W2 148 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 CADM3Q8N126 398 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 CENPSQ8N2Z9 138 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 DEDD2Q8WXF8 326 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 S100ZQ8WXG8 99 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 DCUN1D4Q92564 292 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 DPF1Q92782 380 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 DLX4Q92988 240 aaPredicted RBP5.94□□□□□ -1.46
CPSF4-202ENST00000412686 RBPMSQ93062 196 aaKnown RBP5.94□□□□□ -1.46
CPSF4-202ENST00000412686 LSM10Q969L4 123 aaKnown RBP5.94□□□□□ -1.46
CPSF4-202ENST00000412686 RRNAD1Q96FB5 475 aaKnown RBP5.94□□□□□ -1.46
CPSF4-202ENST00000412686 TMEM56Q96MV1 263 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 TSC22D3Q99576 134 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 CCDC32Q9BV29 185 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 CACNG5Q9UF02 275 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 FBXL7Q9UJT9 491 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 TBC1D24Q9ULP9 559 aa5.94□□□□□ -1.46
CPSF4-202ENST00000412686 TMEM56-RWDD3S4R434 201 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms