RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 Q8N1Y9 231 aa4.76□□□□□ -1.65
RPA3-204ENST00000406109 TOMM5Q8N4H5 51 aa4.76□□□□□ -1.65
RPA3-204ENST00000406109 MINDY2Q8NBR6 621 aa4.76□□□□□ -1.65
RPA3-204ENST00000406109 OR11H1Q8NG94 326 aa4.76□□□□□ -1.65
RPA3-204ENST00000406109 OR51S1Q8NGJ8 323 aa4.76□□□□□ -1.65
RPA3-204ENST00000406109 OR4C16Q8NGL9 310 aa4.76□□□□□ -1.65
RPA3-204ENST00000406109 OR13C8Q8NGS7 320 aa4.76□□□□□ -1.65
RPA3-204ENST00000406109 VSTM2AQ8TAG5 236 aa4.76□□□□□ -1.65
RPA3-204ENST00000406109 TMEM167AQ8TBQ9 72 aa4.76□□□□□ -1.65
RPA3-204ENST00000406109 ZNF486Q96H40 463 aaPredicted RBP4.76□□□□□ -1.65
RPA3-204ENST00000406109 FYTTD1Q96QD9 318 aaKnown RBP4.76□□□□□ -1.65
RPA3-204ENST00000406109 OR5B12Q96R08 314 aa4.76□□□□□ -1.65
RPA3-204ENST00000406109 PRRT1Q99946 306 aa4.76□□□□□ -1.65
RPA3-204ENST00000406109 ZNF430Q9H8G1 570 aaPredicted RBP4.76□□□□□ -1.65
RPA3-204ENST00000406109 PLEKHA2Q9HB19 425 aa4.76□□□□□ -1.65
RPA3-204ENST00000406109 SLC2A9Q9NRM0 540 aa4.76□□□□□ -1.65
RPA3-204ENST00000406109 COPZ2Q9P299 210 aa4.76□□□□□ -1.65
RPA3-204ENST00000406109 SCP2D1Q9UJQ7 156 aa4.76□□□□□ -1.65
RPA3-204ENST00000406109 ZNF580Q9UK33 172 aa4.76□□□□□ -1.65
RPA3-204ENST00000406109 C14orf166Q9Y224 244 aaKnown RBP4.76□□□□□ -1.65
RPA3-204ENST00000406109 FOXA2Q9Y261 457 aaPredicted RBP4.76□□□□□ -1.65
RPA3-204ENST00000406109 TEX13DA0A0J9YY54 714 aaPredicted RBP4.75□□□□□ -1.65
RPA3-204ENST00000406109 C3orf85A0A1B0GTC6 90 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 LINC00854A0A1B0GVQ3 168 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 HMX3A6NHT5 357 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 UPK2O00526 184 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 SOX15O60248 233 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 SNAPC5O75971 98 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 IGLV1-40P01703 118 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 TRGV3P03979 118 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 SERPINE2P07093 398 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 CTSDP07339 412 aaPredicted RBP4.75□□□□□ -1.65
RPA3-204ENST00000406109 GP9P14770 177 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 MYOD1P15172 320 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 HLA-GP17693 338 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 MAS1LP35410 378 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 FAUP35544 74 aaKnown RBP4.75□□□□□ -1.65
RPA3-204ENST00000406109 G6PCP35575 357 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 ETV6P41212 452 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 RPL27AP46776 148 aaKnown RBP4.75□□□□□ -1.65
RPA3-204ENST00000406109 CRIP2P52943 208 aaPredicted RBP4.75□□□□□ -1.65
RPA3-204ENST00000406109 TPPP2P59282 170 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 AP3S2P59780 193 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 RPL8P62917 257 aaKnown RBP4.75□□□□□ -1.65
RPA3-204ENST00000406109 SSBP2P81877 361 aaPredicted RBP4.75□□□□□ -1.65
RPA3-204ENST00000406109 RUNX1Q01196 453 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 ZNF45Q02386 682 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 KLF9Q13886 244 aaPredicted RBP4.75□□□□□ -1.65
RPA3-204ENST00000406109 BAK1Q16611 211 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 C19orf54Q5BKX5 351 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 C10orf55Q5SWW7 151 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 ZNF429Q86V71 674 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 TCTEX1D1Q8N7M0 179 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 ZNF491Q8N8L2 437 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 GDPD1Q8N9F7 314 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 CCDC71LQ8N9Z2 235 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 OR4A5Q8NH83 315 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 SRSF12Q8WXF0 261 aaKnown RBP4.75□□□□□ -1.65
RPA3-204ENST00000406109 DCUN1D4Q92564 292 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 MRGPRFQ96AM1 343 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 TMEM68Q96MH6 324 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 SCGB3A2Q96PL1 93 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 SPIN2AQ99865 258 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 SPIN2BQ9BPZ2 258 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 RTBDNQ9BSG5 229 aaPredicted RBP4.75□□□□□ -1.65
RPA3-204ENST00000406109 SSBP4Q9BWG4 385 aaPredicted RBP4.75□□□□□ -1.65
RPA3-204ENST00000406109 COMMD5Q9GZQ3 224 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 SRRQ9GZT4 340 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 GNB4Q9HAV0 340 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 BATF3Q9NR55 127 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 TMEM140Q9NV12 185 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 C19orf73Q9NVV2 129 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 COA4Q9NYJ1 87 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 BET1LQ9NYM9 111 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 GPR132Q9UNW8 380 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 VSIG4Q9Y279 399 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 NSG2Q9Y328 171 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 MUC4Q99102 2169 aa4.75□□□□□ -1.65
RPA3-204ENST00000406109 TEX50A0A1B0GTY4 177 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 C13orf42A0A1B0GVH6 325 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 MARCH11A6NNE9 402 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 A8MZ25 164 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 E7EUB6 86 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 IGHV3-11P01762 117 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 PRH1P02810 166 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 IL6RP08887 468 aaPredicted RBP4.74□□□□□ -1.65
RPA3-204ENST00000406109 OR9G9P0C7N8 305 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 IGHV4-30-4P0DP06 118 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 AKR1C4P17516 323 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 RND3P61587 244 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 TRIM16LQ309B1 348 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 TRIQKQ629K1 86 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 H2BFWTQ7Z2G1 175 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 SGPP2Q8IWX5 399 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 TTC9CQ8N5M4 171 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 ADAD2Q8NCV1 583 aaKnown RBP4.74□□□□□ -1.65
RPA3-204ENST00000406109 OR1N2Q8NGR9 330 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 OR4A16Q8NH70 328 aa4.74□□□□□ -1.65
RPA3-204ENST00000406109 DLX4Q92988 240 aaPredicted RBP4.74□□□□□ -1.65
RPA3-204ENST00000406109 TRIM63Q969Q1 353 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms