RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 SLC35B3Q9H1N7 401 aa12.8□□□□□ -0.36
LSS-202ENST00000397728 CENPFP49454 3210 aa12.8□□□□□ -0.36
LSS-202ENST00000397728 IGHV2-26A0A0B4J1V2 119 aa12.8□□□□□ -0.36
LSS-202ENST00000397728 FHL1Q13642 323 aa12.8□□□□□ -0.36
LSS-202ENST00000397728 TUSC1Q2TAM9 212 aa12.8□□□□□ -0.36
LSS-202ENST00000397728 LYPD2Q6UXB3 125 aa12.8□□□□□ -0.36
LSS-202ENST00000397728 TMEM219Q86XT9 240 aa12.8□□□□□ -0.36
LSS-202ENST00000397728 SAA1P0DJI8 122 aaPredicted RBP12.79□□□□□ -0.36
LSS-202ENST00000397728 IGHV1-8P0DP01 117 aa12.79□□□□□ -0.36
LSS-202ENST00000397728 RPL30P62888 115 aaKnown RBP12.79□□□□□ -0.36
LSS-202ENST00000397728 FAM89BQ8N5H3 189 aa12.79□□□□□ -0.36
LSS-202ENST00000397728 Q96MF0 132 aa12.79□□□□□ -0.36
LSS-202ENST00000397728 TMSB15BA0A087X1C1 80 aa12.79□□□□□ -0.36
LSS-202ENST00000397728 TMEM78Q5T7P6 136 aa12.79□□□□□ -0.36
LSS-202ENST00000397728 OR10J6PQ8NGY7 276 aa12.79□□□□□ -0.36
LSS-202ENST00000397728 C21orf62Q9NYP8 219 aa12.79□□□□□ -0.36
LSS-202ENST00000397728 NTF4P34130 210 aa12.79□□□□□ -0.36
LSS-202ENST00000397728 SERF2P84101 59 aa12.79□□□□□ -0.36
LSS-202ENST00000397728 ZNF735P0CB33 412 aa12.78□□□□□ -0.36
LSS-202ENST00000397728 UCP1P25874 307 aa12.78□□□□□ -0.36
LSS-202ENST00000397728 LINC01356Q8N9X3 169 aa12.78□□□□□ -0.36
LSS-202ENST00000397728 TAF15Q92804 592 aaKnown RBP eCLIP12.78□□□□□ -0.36
LSS-202ENST00000397728 LYRM2Q9NU23 88 aaPredicted RBP12.78□□□□□ -0.36
LSS-202ENST00000397728 NAV2Q8IVL1 2488 aa12.78□□□□□ -0.36
LSS-202ENST00000397728 COL4A4P53420 1690 aaPredicted RBP12.78□□□□□ -0.36
LSS-202ENST00000397728 H3BUX3 64 aa12.78□□□□□ -0.36
LSS-202ENST00000397728 WNT2P09544 360 aa12.78□□□□□ -0.36
LSS-202ENST00000397728 ELOVL1Q9BW60 279 aa12.78□□□□□ -0.36
LSS-202ENST00000397728 SLC31A2O15432 143 aa12.78□□□□□ -0.36
LSS-202ENST00000397728 SEC11BP0C7V7 166 aa12.78□□□□□ -0.36
LSS-202ENST00000397728 SRD5A1P18405 259 aa12.78□□□□□ -0.36
LSS-202ENST00000397728 SRSF12Q8WXF0 261 aaKnown RBP12.78□□□□□ -0.36
LSS-202ENST00000397728 H3BTX0 84 aa12.78□□□□□ -0.36
LSS-202ENST00000397728 NDUFS8O00217 210 aa12.78□□□□□ -0.36
LSS-202ENST00000397728 CAMPP49913 170 aa12.78□□□□□ -0.36
LSS-202ENST00000397728 C5orf17Q8NAS9 161 aa12.78□□□□□ -0.36
LSS-202ENST00000397728 RSPO3Q9BXY4 272 aaPredicted RBP12.78□□□□□ -0.36
LSS-202ENST00000397728 DNAJC4Q9NNZ3 241 aa12.78□□□□□ -0.36
LSS-202ENST00000397728 HIVEP2P31629 2446 aa12.77□□□□□ -0.36
LSS-202ENST00000397728 HELTA6NFD8 242 aa12.77□□□□□ -0.36
LSS-202ENST00000397728 DHRS11Q6UWP2 260 aa12.77□□□□□ -0.36
LSS-202ENST00000397728 CLEC19AQ6UXS0 136 aa12.77□□□□□ -0.36
LSS-202ENST00000397728 FOXA2Q9Y261 457 aaPredicted RBP12.77□□□□□ -0.36
LSS-202ENST00000397728 UTRNP46939 3433 aa12.77□□□□□ -0.36
LSS-202ENST00000397728 A0A0A6YYD4 124 aa12.77□□□□□ -0.37
LSS-202ENST00000397728 RPL7P18124 248 aaKnown RBP12.77□□□□□ -0.37
LSS-202ENST00000397728 LGALSLQ3ZCW2 172 aaPredicted RBP12.77□□□□□ -0.37
LSS-202ENST00000397728 TMEM88Q6PEY1 159 aa12.77□□□□□ -0.37
LSS-202ENST00000397728 C8orf46Q8TAG6 207 aa12.77□□□□□ -0.37
LSS-202ENST00000397728 TMEM42Q69YG0 159 aa12.77□□□□□ -0.37
LSS-202ENST00000397728 TNFRSF14Q92956 283 aa12.77□□□□□ -0.37
LSS-202ENST00000397728 SCGB1D1O95968 90 aa12.77□□□□□ -0.37
LSS-202ENST00000397728 Q71RC1 249 aaPredicted RBP12.77□□□□□ -0.37
LSS-202ENST00000397728 PRNTQ86SH4 94 aa12.77□□□□□ -0.37
LSS-202ENST00000397728 VAX2Q9UIW0 290 aa12.77□□□□□ -0.37
LSS-202ENST00000397728 IGKV1D-17A0A075B6S4 117 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 TRAV20A0A0B4J274 112 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 IGHV3-66A0A0C4DH42 116 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 CFDP00746 253 aaPredicted RBP12.76□□□□□ -0.37
LSS-202ENST00000397728 TCL1AP56279 114 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 RNF144BQ7Z419 303 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 GAFA1Q96PS6 74 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 WNT10AQ9GZT5 417 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 P01737 135 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 IGKV3-20P01619 116 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 LDLRAD3Q86YD5 345 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 DDB2Q92466 427 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 SMIM8Q96KF7 97 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 GFI1Q99684 422 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 IGKV1D-8A0A087WSZ0 117 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 ZNF503-AS2A6NEH8 195 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 AP4M1O00189 453 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 EIF3GO75821 320 aaKnown RBP eCLIP12.76□□□□□ -0.37
LSS-202ENST00000397728 DMRTA2Q96SC8 542 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 TUBA4BQ9H853 241 aa12.76□□□□□ -0.37
LSS-202ENST00000397728 MSMBP08118 114 aa12.75□□□□□ -0.37
LSS-202ENST00000397728 RND3P61587 244 aa12.75□□□□□ -0.37
LSS-202ENST00000397728 OR51G1Q8NGK1 321 aa12.75□□□□□ -0.37
LSS-202ENST00000397728 GALNT14Q96FL9 552 aa12.75□□□□□ -0.37
LSS-202ENST00000397728 PGPA6NDG6 321 aa12.75□□□□□ -0.37
LSS-202ENST00000397728 TMEM155Q4W5P6 130 aa12.75□□□□□ -0.37
LSS-202ENST00000397728 SRSF10O75494 262 aaKnown RBP12.75□□□□□ -0.37
LSS-202ENST00000397728 DLX6P56179 175 aa12.75□□□□□ -0.37
LSS-202ENST00000397728 AURKAIP1Q9NWT8 199 aaPredicted RBP12.75□□□□□ -0.37
LSS-202ENST00000397728 IGSF23A1L1A6 192 aa12.74□□□□□ -0.37
LSS-202ENST00000397728 ATP5IP56385 69 aaPredicted RBP12.74□□□□□ -0.37
LSS-202ENST00000397728 H2BFSP57053 126 aa12.74□□□□□ -0.37
LSS-202ENST00000397728 DCAF16Q9NXF7 216 aa12.74□□□□□ -0.37
LSS-202ENST00000397728 NPFFO15130 113 aa12.74□□□□□ -0.37
LSS-202ENST00000397728 ZNF345Q14585 488 aa12.74□□□□□ -0.37
LSS-202ENST00000397728 PQLC2Q6ZP29 291 aa12.74□□□□□ -0.37
LSS-202ENST00000397728 C9orf62Q8N4C0 152 aa12.74□□□□□ -0.37
LSS-202ENST00000397728 RAX2Q96IS3 184 aa12.74□□□□□ -0.37
LSS-202ENST00000397728 IFI27L2Q9H2X8 130 aa12.74□□□□□ -0.37
LSS-202ENST00000397728 NAT8BQ9UHF3 227 aa12.74□□□□□ -0.37
LSS-202ENST00000397728 SNRPD3P62318 126 aaKnown RBP12.74□□□□□ -0.37
LSS-202ENST00000397728 BSXQ3C1V8 233 aa12.74□□□□□ -0.37
LSS-202ENST00000397728 NSUN5P1Q3KNT7 163 aa12.74□□□□□ -0.37
LSS-202ENST00000397728 GBGT1Q8N5D6 347 aa12.74□□□□□ -0.37
LSS-202ENST00000397728 RTBDNQ9BSG5 229 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms