RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 GNG7O60262 68 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 ZG16O60844 167 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 IFNA5P01569 189 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 GYPAP02724 150 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 IGFBP2P18065 325 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 ADMP35318 185 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 RPS20P60866 119 aaKnown RBP4.43□□□□□ -1.7
VPS41-203ENST00000395969 KRTDAPP60985 99 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 RBPJQ06330 500 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 VWC2Q2TAL6 325 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 PIGYQ3MUY2 71 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 Q6ZN92 141 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 PIGCQ92535 297 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 TAAR3PQ9P1P4 343 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 HSPB7Q9UBY9 170 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 LAMTOR2Q9Y2Q5 125 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 TMEM30CPA0ZSE6 113 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 ODAMA1E959 279 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 STAG3L3P0CL85 134 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 IGLC2P0DOY2 106 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 IGLC3P0DOY3 106 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 VDAC1P21796 283 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 MPV17P39210 176 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 KIR2DS2P43631 304 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 PRRX1P54821 245 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 UBE2G2P60604 165 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 SRYQ05066 204 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 LRRC75BQ2VPJ9 315 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 SMIM21Q3B7S5 101 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 COMMD2Q86X83 199 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 ZNF439Q8NDP4 499 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 CFHR4Q92496 578 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 PINX1Q96BK5 328 aaKnown RBP4.43□□□□□ -1.7
VPS41-203ENST00000395969 RPUSD4Q96CM3 377 aaKnown RBP4.43□□□□□ -1.7
VPS41-203ENST00000395969 CSTL1Q9H114 145 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 UQCR10Q9UDW1 63 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 TP73-AS1Q9UF72 201 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 NBEAQ8NFP9 2946 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 RNF212BA8MTL3 300 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 HYPMO75409 117 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 OR2H2O95918 312 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 LIPFP07098 398 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 CD3EP07766 207 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 PATE4P0C8F1 98 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 PSG1P11464 419 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 TNFRSF1AP19438 455 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 CD40P25942 277 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 GPM6AP51674 278 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 TBC1D26Q86UD7 250 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 ZNF695Q8IW36 515 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 ZNF525Q8N782 197 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 ZNF738Q8NE65 137 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 OR5AU1Q8NGC0 362 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 CITED1Q99966 193 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 HSPB9Q9BQS6 159 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 KCNIP1Q9NZI2 227 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 ERRFI1Q9UJM3 462 aaPredicted RBP4.43□□□□□ -1.7
VPS41-203ENST00000395969 PRRG2O14669 202 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 TMPRSS2O15393 492 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 SYNGR1O43759 233 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 MFAP4P55083 255 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 RHOGP84095 191 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 Q0VG73 95 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 C3AR1Q16581 482 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 MSMPQ1L6U9 139 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 FBLN7Q53RD9 439 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 FAM78BQ5VT40 261 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 ZNF645Q8N7E2 425 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 DDB2Q92466 427 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 GPR146Q96CH1 333 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 WNT10AQ9GZT5 417 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 MEGF9Q9H1U4 602 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 MRPS16Q9Y3D3 137 aaKnown RBP4.42□□□□□ -1.7
VPS41-203ENST00000395969 RNF114Q9Y508 228 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 FRYQ5TBA9 3013 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 ZNF407Q9C0G0 2248 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 TRAV30A0A087WSZ9 112 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 C16orf97H3BN30 126 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 MGST3O14880 152 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 GFRA3O60609 400 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 SAP30O75446 220 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 SERF1AO75920 110 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 HAND1O96004 215 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 IGKV1D-33P01593 117 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 IGKV1-33P01594 117 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 BMI1P35226 326 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 PSMB3P49720 205 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 HNRNPA3P51991 378 aaKnown RBP4.42□□□□□ -1.7
VPS41-203ENST00000395969 SPATA45Q537H7 98 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 ZNF788Q6ZQV5 615 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 RPP25LQ8N5L8 163 aaKnown RBP4.42□□□□□ -1.7
VPS41-203ENST00000395969 SCGB1C1Q8TD33 95 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 TNFRSF14Q92956 283 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 RNASE6Q93091 150 aaKnown RBP4.42□□□□□ -1.7
VPS41-203ENST00000395969 ST6GALNAC6Q969X2 333 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 RAB40CQ96S21 281 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 SAMD10Q9BYL1 202 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 TMEM140Q9NV12 185 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 TIMM9Q9Y5J7 89 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 BDP1A6H8Y1 2624 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms