RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 UFC1Q9Y3C8 167 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 S4R3C0 116 aa11.94□□□□□ -0.5
VCX3A-201ENST00000381089 HLA-DQB1P01920 261 aa11.93□□□□□ -0.5
VCX3A-201ENST00000381089 FCER2P06734 321 aa11.93□□□□□ -0.5
VCX3A-201ENST00000381089 MYOD1P15172 320 aa11.93□□□□□ -0.5
VCX3A-201ENST00000381089 ELLP55199 621 aaPredicted RBP11.93□□□□□ -0.5
VCX3A-201ENST00000381089 RPL8P62917 257 aaKnown RBP11.93□□□□□ -0.5
VCX3A-201ENST00000381089 ZNF585BQ52M93 769 aa11.93□□□□□ -0.5
VCX3A-201ENST00000381089 RNASE12Q5GAN4 147 aaKnown RBP11.93□□□□□ -0.5
VCX3A-201ENST00000381089 HACD4Q5VWC8 232 aa11.93□□□□□ -0.5
VCX3A-201ENST00000381089 C19orf35Q6ZS72 473 aa11.93□□□□□ -0.5
VCX3A-201ENST00000381089 FANCD2OSQ96PS1 177 aa11.93□□□□□ -0.5
VCX3A-201ENST00000381089 SPAG8Q99932 426 aaPredicted RBP11.93□□□□□ -0.5
VCX3A-201ENST00000381089 THYN1Q9P016 225 aa11.93□□□□□ -0.5
VCX3A-201ENST00000381089 MEIS3P1A6NDR6 274 aa11.92□□□□□ -0.5
VCX3A-201ENST00000381089 CYB5BO43169 146 aa11.92□□□□□ -0.5
VCX3A-201ENST00000381089 SSX5O60225 188 aa11.92□□□□□ -0.5
VCX3A-201ENST00000381089 CLEC3BP05452 202 aa11.92□□□□□ -0.5
VCX3A-201ENST00000381089 AREGP15514 252 aa11.92□□□□□ -0.5
VCX3A-201ENST00000381089 CTRB1P17538 263 aa11.92□□□□□ -0.5
VCX3A-201ENST00000381089 NFYAP23511 347 aaPredicted RBP11.92□□□□□ -0.5
VCX3A-201ENST00000381089 RPL30P62888 115 aaKnown RBP11.92□□□□□ -0.5
VCX3A-201ENST00000381089 DEFB135Q30KP9 77 aa11.92□□□□□ -0.5
VCX3A-201ENST00000381089 CTRB2Q6GPI1 263 aa11.92□□□□□ -0.5
VCX3A-201ENST00000381089 PUSL1Q8N0Z8 303 aaKnown RBP11.92□□□□□ -0.5
VCX3A-201ENST00000381089 STPG3Q8N7X2 389 aa11.92□□□□□ -0.5
VCX3A-201ENST00000381089 DIRAS2Q96HU8 199 aa11.92□□□□□ -0.5
VCX3A-201ENST00000381089 IGKV1D-8A0A087WSZ0 117 aa11.91□□□□□ -0.5
VCX3A-201ENST00000381089 KIR2DL5BA0A0G2JN68 375 aa11.91□□□□□ -0.5
VCX3A-201ENST00000381089 KIR2DL5BA0A0G2JPC4 375 aa11.91□□□□□ -0.5
VCX3A-201ENST00000381089 C8orf88P0DMB2 117 aa11.91□□□□□ -0.5
VCX3A-201ENST00000381089 TNFSF8P32971 234 aa11.91□□□□□ -0.5
VCX3A-201ENST00000381089 S100A5P33763 92 aa11.91□□□□□ -0.5
VCX3A-201ENST00000381089 KLK9Q2XQG4 91 aa11.91□□□□□ -0.5
VCX3A-201ENST00000381089 LAMTOR1Q6IAA8 161 aa11.91□□□□□ -0.5
VCX3A-201ENST00000381089 PLET1Q6UQ28 207 aa11.91□□□□□ -0.5
VCX3A-201ENST00000381089 ZNF66Q6ZN08 573 aa11.91□□□□□ -0.5
VCX3A-201ENST00000381089 KIR2DL5AQ8N109 375 aa11.91□□□□□ -0.5
VCX3A-201ENST00000381089 OR4A5Q8NH83 315 aa11.91□□□□□ -0.5
VCX3A-201ENST00000381089 KIR2DL5BQ8NHK3 375 aa11.91□□□□□ -0.5
VCX3A-201ENST00000381089 KRTAP17-1Q9BYP8 105 aa11.91□□□□□ -0.5
VCX3A-201ENST00000381089 C5orf66Q9H5L9 145 aa11.91□□□□□ -0.5
VCX3A-201ENST00000381089 KLK9Q9UKQ9 250 aa11.91□□□□□ -0.5
VCX3A-201ENST00000381089 IGLV11-55A0A075B6I3 123 aa11.9□□□□□ -0.5
VCX3A-201ENST00000381089 E7EUB6 86 aa11.9□□□□□ -0.5
VCX3A-201ENST00000381089 REG1AP05451 166 aa11.9□□□□□ -0.5
VCX3A-201ENST00000381089 HLA-GP17693 338 aa11.9□□□□□ -0.5
VCX3A-201ENST00000381089 GPR183P32249 361 aa11.9□□□□□ -0.5
VCX3A-201ENST00000381089 UNQ9165/PRO28630Q6UXU0 137 aa11.9□□□□□ -0.5
VCX3A-201ENST00000381089 SSX9Q7RTT3 188 aa11.9□□□□□ -0.5
VCX3A-201ENST00000381089 MFSD4AQ8N468 514 aa11.9□□□□□ -0.5
VCX3A-201ENST00000381089 HRASLSQ9HDD0 168 aa11.9□□□□□ -0.5
VCX3A-201ENST00000381089 TAS2R8Q9NYW2 309 aa11.9□□□□□ -0.5
VCX3A-201ENST00000381089 KMT2AQ03164 3969 aa11.89□□□□□ -0.51
VCX3A-201ENST00000381089 MFSD2BA6NFX1 497 aa11.89□□□□□ -0.51
VCX3A-201ENST00000381089 PRSS3P35030 304 aa11.89□□□□□ -0.51
VCX3A-201ENST00000381089 IL18Q14116 193 aa11.89□□□□□ -0.51
VCX3A-201ENST00000381089 GVQW1Q8N7I0 195 aa11.89□□□□□ -0.51
VCX3A-201ENST00000381089 RNF183Q96D59 192 aa11.89□□□□□ -0.51
VCX3A-201ENST00000381089 BET1LQ9NYM9 111 aa11.89□□□□□ -0.51
VCX3A-201ENST00000381089 UBQLN2Q9UHD9 624 aa11.89□□□□□ -0.51
VCX3A-201ENST00000381089 IGKV1D-13A0A0B4J2D9 117 aa11.88□□□□□ -0.51
VCX3A-201ENST00000381089 A0A1B0GW64 132 aa11.88□□□□□ -0.51
VCX3A-201ENST00000381089 TSPAN4O14817 238 aa11.88□□□□□ -0.51
VCX3A-201ENST00000381089 IGLV2-14P01704 120 aa11.88□□□□□ -0.51
VCX3A-201ENST00000381089 IGKV1-13P0DP09 117 aa11.88□□□□□ -0.51
VCX3A-201ENST00000381089 EWSR1Q01844 656 aaKnown RBP eCLIP11.88□□□□□ -0.51
VCX3A-201ENST00000381089 LGALS9CQ6DKI2 356 aa11.88□□□□□ -0.51
VCX3A-201ENST00000381089 RPP25LQ8N5L8 163 aaKnown RBP11.88□□□□□ -0.51
VCX3A-201ENST00000381089 ZNF502Q8TBZ5 544 aa11.88□□□□□ -0.51
VCX3A-201ENST00000381089 ABHD1Q96SE0 405 aa11.88□□□□□ -0.51
VCX3A-201ENST00000381089 SRSF8Q9BRL6 282 aaKnown RBP11.88□□□□□ -0.51
VCX3A-201ENST00000381089 IFT46Q9NQC8 304 aa11.88□□□□□ -0.51
VCX3A-201ENST00000381089 FABP12A6NFH5 140 aa11.87□□□□□ -0.51
VCX3A-201ENST00000381089 OR4C46A6NHA9 309 aa11.87□□□□□ -0.51
VCX3A-201ENST00000381089 PTBP1P26599 531 aaKnown RBP eCLIP11.87□□□□□ -0.51
VCX3A-201ENST00000381089 PHLDA1Q8WV24 401 aaPredicted RBP11.87□□□□□ -0.51
VCX3A-201ENST00000381089 TMEM190Q8WZ59 177 aa11.87□□□□□ -0.51
VCX3A-201ENST00000381089 GALNT14Q96FL9 552 aa11.87□□□□□ -0.51
VCX3A-201ENST00000381089 ZNF436Q9C0F3 470 aaPredicted RBP11.87□□□□□ -0.51
VCX3A-201ENST00000381089 COMMD5Q9GZQ3 224 aa11.87□□□□□ -0.51
VCX3A-201ENST00000381089 DAZ1Q9NQZ3 744 aaKnown RBP11.87□□□□□ -0.51
VCX3A-201ENST00000381089 PTTG2Q9NZH5 202 aa11.87□□□□□ -0.51
VCX3A-201ENST00000381089 ANXA10Q9UJ72 324 aa11.87□□□□□ -0.51
VCX3A-201ENST00000381089 IGHV3-35A0A0C4DH35 117 aa11.86□□□□□ -0.51
VCX3A-201ENST00000381089 TGOLN2O43493 480 aa11.86□□□□□ -0.51
VCX3A-201ENST00000381089 TAS2R31P59538 309 aa11.86□□□□□ -0.51
VCX3A-201ENST00000381089 OR2B8PP59922 312 aa11.86□□□□□ -0.51
VCX3A-201ENST00000381089 CATR1Q13166 79 aa11.86□□□□□ -0.51
VCX3A-201ENST00000381089 EIF4EBP1Q13541 118 aaPredicted RBP11.86□□□□□ -0.51
VCX3A-201ENST00000381089 MSMO1Q15800 293 aa11.86□□□□□ -0.51
VCX3A-201ENST00000381089 CCDC190Q86UF4 302 aa11.86□□□□□ -0.51
VCX3A-201ENST00000381089 SPAG16Q8N0X2 631 aa11.86□□□□□ -0.51
VCX3A-201ENST00000381089 OR52I2Q8NH67 350 aa11.86□□□□□ -0.51
VCX3A-201ENST00000381089 VN1R17PQ8TDU5 208 aa11.86□□□□□ -0.51
VCX3A-201ENST00000381089 GPX8Q8TED1 209 aa11.86□□□□□ -0.51
VCX3A-201ENST00000381089 V9GYH0 126 aa11.86□□□□□ -0.51
VCX3A-201ENST00000381089 RBFOX2O43251 390 aaKnown RBP eCLIP11.85□□□□□ -0.51
VCX3A-201ENST00000381089 RPL35AP18077 110 aaKnown RBP11.85□□□□□ -0.51
VCX3A-201ENST00000381089 CBX5P45973 191 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms