RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 TEX22C9J3V5 150 aa9.15□□□□□ -0.95
DEPDC4-202ENST00000378244 B3GALNT1O75752 331 aa9.15□□□□□ -0.95
DEPDC4-202ENST00000378244 IGLV1-40P01703 118 aa9.15□□□□□ -0.95
DEPDC4-202ENST00000378244 OR4E1P0C645 316 aa9.15□□□□□ -0.95
DEPDC4-202ENST00000378244 RAB9AP51151 201 aa9.15□□□□□ -0.95
DEPDC4-202ENST00000378244 ANKRD55Q3KP44 614 aa9.15□□□□□ -0.95
DEPDC4-202ENST00000378244 NRARPQ7Z6K4 114 aa9.15□□□□□ -0.95
DEPDC4-202ENST00000378244 OR52B4Q8NGK2 314 aa9.15□□□□□ -0.95
DEPDC4-202ENST00000378244 ENKURQ8TC29 256 aa9.15□□□□□ -0.95
DEPDC4-202ENST00000378244 DUX3Q96PT4 197 aa9.15□□□□□ -0.95
DEPDC4-202ENST00000378244 TSSC4Q9Y5U2 329 aaPredicted RBP9.15□□□□□ -0.95
DEPDC4-202ENST00000378244 C15orf61A6NNL5 157 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 ADARB2-AS1A8MUL3 147 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 ATG12O94817 140 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 IGHV3-11P01762 117 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 ELANEP08246 267 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 BTF3P20290 206 aaKnown RBP9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 MAS1LP35410 378 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 TPPP2P59282 170 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 UBE2MP61081 183 aaKnown RBP9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 DHRS2Q13268 280 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 FOXE3Q13461 319 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 DEFB136Q30KP8 78 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 C8orf86Q6ZUL3 223 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 COMMD1Q8N668 190 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 KLHL30-AS1Q8NEE0 82 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 FAM110DQ8TAY7 271 aaPredicted RBP9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 TMEM56Q96MV1 263 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 QTRT1Q9BXR0 403 aaKnown RBP9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 PRNDQ9UKY0 176 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 TMEM56-RWDD3S4R434 201 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 C9orf170A2RU37 121 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 SFT2D2O95562 160 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 TSPAN15O95858 294 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 TRGV3P03979 118 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 CRIP2P52943 208 aaPredicted RBP9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 LGI3Q8N145 548 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 TMEM14BQ9NUH8 114 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 CACNG5Q9UF02 275 aa9.14□□□□□ -0.95
DEPDC4-202ENST00000378244 TET2Q6N021 2002 aaPredicted RBP9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 NBEAL1Q6ZS30 2694 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 IFNA17P01571 189 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 HOXB5P09067 269 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 OR13C7P0DN81 318 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 DEFA4P12838 97 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 MECP2P51608 486 aaKnown RBP9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 NDUFA11Q86Y39 141 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 OR5M8Q8NGP6 311 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 OR1L8Q8NGR8 309 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 GPR146Q96CH1 333 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 ZMAT5Q9UDW3 170 aaKnown RBP9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 ZNF580Q9UK33 172 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 M0QZ24 198 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 H2AFB2P0C5Z0 115 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 TRAPPC2P0DI81 140 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 TRAPPC2BP0DI82 140 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 DEFA1P59665 94 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 DEFA3P59666 94 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 RPL23AP62750 156 aaKnown RBP9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 WT1-ASQ06250 92 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 C2orf68Q2NKX9 166 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 UXS1Q8NBZ7 420 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 ALX4Q9H161 411 aaPredicted RBP9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 GNB4Q9HAV0 340 aa9.13□□□□□ -0.95
DEPDC4-202ENST00000378244 A0A0B4J2A0 478 aa9.12□□□□□ -0.95
DEPDC4-202ENST00000378244 IGLC7A0M8Q6 106 aa9.12□□□□□ -0.95
DEPDC4-202ENST00000378244 ST8SIA3O43173 380 aa9.12□□□□□ -0.95
DEPDC4-202ENST00000378244 ADAP1O75689 374 aa9.12□□□□□ -0.95
DEPDC4-202ENST00000378244 P0C879 139 aa9.12□□□□□ -0.95
DEPDC4-202ENST00000378244 OR5B3Q8NH48 314 aa9.12□□□□□ -0.95
DEPDC4-202ENST00000378244 SEC22CQ9BRL7 303 aa9.12□□□□□ -0.95
DEPDC4-202ENST00000378244 PDCD10Q9BUL8 212 aa9.12□□□□□ -0.95
DEPDC4-202ENST00000378244 NDUFA4L2Q9NRX3 87 aa9.12□□□□□ -0.95
DEPDC4-202ENST00000378244 FKBP11Q9NYL4 201 aa9.12□□□□□ -0.95
DEPDC4-202ENST00000378244 SHPKQ9UHJ6 478 aa9.12□□□□□ -0.95
DEPDC4-202ENST00000378244 PFDN2Q9UHV9 154 aa9.12□□□□□ -0.95
DEPDC4-202ENST00000378244 S4R3C0 116 aa9.12□□□□□ -0.95
DEPDC4-202ENST00000378244 HSPE1P61604 102 aaKnown RBP9.11□□□□□ -0.95
DEPDC4-202ENST00000378244 SRPXP78539 464 aa9.11□□□□□ -0.95
DEPDC4-202ENST00000378244 LYG2Q86SG7 212 aa9.11□□□□□ -0.95
DEPDC4-202ENST00000378244 TMEM68Q96MH6 324 aa9.11□□□□□ -0.95
DEPDC4-202ENST00000378244 OR2J3O76001 311 aa9.11□□□□□ -0.95
DEPDC4-202ENST00000378244 PSMB6P28072 239 aa9.11□□□□□ -0.95
DEPDC4-202ENST00000378244 RHOGP84095 191 aa9.11□□□□□ -0.95
DEPDC4-202ENST00000378244 KIAA0141Q14154 515 aaPredicted RBP9.11□□□□□ -0.95
DEPDC4-202ENST00000378244 TTC9CQ8N5M4 171 aa9.11□□□□□ -0.95
DEPDC4-202ENST00000378244 ZNF491Q8N8L2 437 aa9.11□□□□□ -0.95
DEPDC4-202ENST00000378244 RNF152Q8N8N0 203 aa9.11□□□□□ -0.95
DEPDC4-202ENST00000378244 IL22RA2Q969J5 263 aa9.11□□□□□ -0.95
DEPDC4-202ENST00000378244 LSM10Q969L4 123 aaKnown RBP9.11□□□□□ -0.95
DEPDC4-202ENST00000378244 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.11□□□□□ -0.95
DEPDC4-202ENST00000378244 ZFP57Q9NU63 452 aa9.11□□□□□ -0.95
DEPDC4-202ENST00000378244 MPTX1A8MV57 137 aa9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 DUS4LO95620 317 aaKnown RBP9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 CDX1P47902 265 aaPredicted RBP9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 NMSQ5H8A3 153 aa9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 PLET1Q6UQ28 207 aa9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 ZNF429Q86V71 674 aa9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 FAM219AQ8IW50 185 aa9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 UBE2E2Q96LR5 201 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms