RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 MPDU1O75352 247 aa13.73□□□□□ -0.21
PCDHA1-201ENST00000378133 AMTP48728 403 aa13.73□□□□□ -0.21
PCDHA1-201ENST00000378133 FOXF2Q12947 444 aa13.73□□□□□ -0.21
PCDHA1-201ENST00000378133 EDDM3AQ14507 147 aa13.73□□□□□ -0.21
PCDHA1-201ENST00000378133 MIC13Q5XKP0 118 aa13.73□□□□□ -0.21
PCDHA1-201ENST00000378133 LYG1Q8N1E2 194 aa13.73□□□□□ -0.21
PCDHA1-201ENST00000378133 CLCF1Q9UBD9 225 aa13.73□□□□□ -0.21
PCDHA1-201ENST00000378133 SVILO95425 2214 aa13.73□□□□□ -0.21
PCDHA1-201ENST00000378133 PRR33A8MZF0 331 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 NDUFB8O95169 186 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 IGKV3-15P01624 115 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 OR5G3P0C626 314 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 OR9G9P0C7N8 305 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 VWA1Q6PCB0 445 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 TREML4Q6UXN2 200 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 Q6ZN92 141 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 OR8I2Q8N0Y5 310 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 WDR31Q8NA23 367 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 ST6GALNAC3Q8NDV1 305 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 NUDT10Q8NFP7 164 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 PRR7Q8TB68 274 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 GNB1LQ9BYB4 327 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 NAT8BQ9UHF3 227 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 SPENQ96T58 3664 aaKnown RBP13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 AQP7O14520 342 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 HOXC12P31275 282 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 HSD17B10Q99714 261 aaKnown RBP13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 LAMTOR2Q9Y2Q5 125 aa13.72□□□□□ -0.21
PCDHA1-201ENST00000378133 TRBV9A0A0B4J1U6 114 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 SPINK4O60575 86 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 PROP1O75360 226 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 ZNF718Q3SXZ3 478 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 CD177Q8N6Q3 437 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 TCTEX1D1Q8N7M0 179 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 CACNA1HO95180 2353 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 ZNF253O75346 499 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 HYPMO75409 117 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 IGHV3-13P01766 116 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 IGHV3-7P01780 117 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 IGLC2P0DOY2 106 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 IGLC3P0DOY3 106 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 PMCHP20382 165 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 HNRNPA3P51991 378 aaKnown RBP13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 TCF15Q12870 199 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 KIAA1644Q3SXP7 199 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 MGST2Q99735 147 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 FAM234AQ9H0X4 552 aa13.71□□□□□ -0.21
PCDHA1-201ENST00000378133 K7EP13 123 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 SPINT2O43291 252 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 FCGR3BO75015 233 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 SMIM21Q3B7S5 101 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 EAF1Q96JC9 268 aaPredicted RBP13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 SFXN3Q9BWM7 321 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 PTPRBP23467 1997 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 INTS1Q8N201 2190 aaKnown RBP13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 C15orf65H3BRN8 121 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 CECR9P0C854 216 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 GCHFRP30047 84 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 KIR2DL2P43627 348 aaPredicted RBP13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 C1orf185Q5T7R7 199 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 VKORC1L1Q8N0U8 176 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 UHRF2Q96PU4 802 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 GGTLC1Q9BX51 225 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 MS4A5Q9H3V2 200 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 TUBG2Q9NRH3 451 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 V9GYV3 84 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 CFAP47Q6ZTR5 3102 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 A0A1W2PS18 150 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 HSBP1L1C9JCN9 74 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 TMEM238C9JI98 176 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 DUTP33316 252 aaKnown RBP13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 GPR12P47775 334 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 PRSS33Q8NF86 280 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 LRRC29Q8WV35 223 aa13.7□□□□□ -0.22
PCDHA1-201ENST00000378133 CADP27708 2225 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 PRDX2P32119 198 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 CCL11P51671 97 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 KLF3P57682 345 aaPredicted RBP13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 ORAOV1Q8WV07 137 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 SSMEM1Q8WWF3 244 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 KCNS1Q96KK3 526 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 RCHY1Q96PM5 261 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 ALKBH7Q9BT30 221 aaPredicted RBP13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 TRGV10A0A0A0MS01 117 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 TRAV34A0A0B4J273 112 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 A0A1W2PN81 502 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 ZNF891A8MT65 544 aaPredicted RBP13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 C9JCJ5 164 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 MMP23AO75900 390 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 ZNF83P51522 516 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 RPL19P84098 196 aaKnown RBP13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 OR10J3Q5JRS4 329 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 SMIM15Q7Z3B0 74 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 C9orf106Q8NAJ2 232 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 SLC24A4Q8NFF2 622 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 WNT10AQ9GZT5 417 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 HEYLQ9NQ87 328 aaPredicted RBP13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 GNG12Q9UBI6 72 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 LY96Q9Y6Y9 160 aa13.69□□□□□ -0.22
PCDHA1-201ENST00000378133 ZFHX4Q86UP3 3567 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms