RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 MPDU1O75352 247 aa17.05■□□□□ 0.32
TMEFF1-201ENST00000374879 LGALS7P47929 136 aa17.05■□□□□ 0.32
TMEFF1-201ENST00000374879 LINC00205P59089 165 aa17.05■□□□□ 0.32
TMEFF1-201ENST00000374879 IBA57Q5T440 356 aaKnown RBP17.05■□□□□ 0.32
TMEFF1-201ENST00000374879 GDF5OSQ5U4N7 250 aa17.05■□□□□ 0.32
TMEFF1-201ENST00000374879 MRPL14Q6P1L8 145 aaKnown RBP17.05■□□□□ 0.32
TMEFF1-201ENST00000374879 LINC00596Q86U02 117 aa17.05■□□□□ 0.32
TMEFF1-201ENST00000374879 FAM168AQ92567 244 aa17.05■□□□□ 0.32
TMEFF1-201ENST00000374879 EFNB3Q15768 340 aa17.04■□□□□ 0.32
TMEFF1-201ENST00000374879 SLC25A40Q8TBP6 338 aa17.04■□□□□ 0.32
TMEFF1-201ENST00000374879 PRDM14Q9GZV8 571 aa17.04■□□□□ 0.32
TMEFF1-201ENST00000374879 K7ESF4 209 aa17.04■□□□□ 0.32
TMEFF1-201ENST00000374879 ISLRO14498 428 aa17.04■□□□□ 0.32
TMEFF1-201ENST00000374879 MGST1P10620 155 aaKnown RBP17.04■□□□□ 0.32
TMEFF1-201ENST00000374879 BMI1P35226 326 aa17.04■□□□□ 0.32
TMEFF1-201ENST00000374879 CXCL12P48061 93 aa17.04■□□□□ 0.32
TMEFF1-201ENST00000374879 PCOLCEQ15113 449 aa17.04■□□□□ 0.32
TMEFF1-201ENST00000374879 TIGITQ495A1 244 aa17.04■□□□□ 0.32
TMEFF1-201ENST00000374879 ZNF645Q8N7E2 425 aa17.04■□□□□ 0.32
TMEFF1-201ENST00000374879 CHRDL1Q9BU40 450 aa17.04■□□□□ 0.32
TMEFF1-201ENST00000374879 SSBP3Q9BWW4 388 aaPredicted RBP17.04■□□□□ 0.32
TMEFF1-201ENST00000374879 GJE1A6NN92 205 aa17.03■□□□□ 0.32
TMEFF1-201ENST00000374879 HOXC12P31275 282 aa17.03■□□□□ 0.32
TMEFF1-201ENST00000374879 LINC00173Q6ZV60 143 aa17.03■□□□□ 0.32
TMEFF1-201ENST00000374879 FNDC4Q9H6D8 234 aaPredicted RBP17.03■□□□□ 0.32
TMEFF1-201ENST00000374879 RBPJQ06330 500 aa17.03■□□□□ 0.32
TMEFF1-201ENST00000374879 COLCA1Q6ZS62 124 aa17.03■□□□□ 0.32
TMEFF1-201ENST00000374879 OR1N2Q8NGR9 330 aa17.03■□□□□ 0.32
TMEFF1-201ENST00000374879 TMEM186Q96B77 213 aa17.03■□□□□ 0.32
TMEFF1-201ENST00000374879 PI4KAP42356 2102 aa17.03■□□□□ 0.32
TMEFF1-201ENST00000374879 C7orf71A4D174 169 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 FAM231BA6NCW3 169 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 ZIC3O60481 467 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 RHBDL1O75783 438 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 MT-CO2P00403 227 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 PCBD1P61457 104 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 KLF5Q13887 457 aaPredicted RBP17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 PRR31Q5SQ13 230 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 Q6P435 159 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 TCF24Q7RTU0 167 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 C5orf17Q8NAS9 161 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 SDK2Q58EX2 2172 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 NDUFS8O00217 210 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 IGLV2-8P01709 118 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 CCL3P10147 92 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 AREGP15514 252 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 FOXE3Q13461 319 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 GABRA6Q16445 453 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 FAM120AOSQ5T036 256 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 UFSP1Q6NVU6 142 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 AAED1Q7RTV5 226 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 MRPL21Q7Z2W9 205 aaKnown RBP17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 C1orf159Q96HA4 380 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 URB1-AS1Q96HZ7 61 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 SSBP4Q9BWG4 385 aaPredicted RBP17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 SAP30LQ9HAJ7 183 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 SCRT2Q9NQ03 307 aa17.02■□□□□ 0.32
TMEFF1-201ENST00000374879 ZNF497Q6ZNH5 498 aa17.01■□□□□ 0.31
TMEFF1-201ENST00000374879 SAP25Q8TEE9 199 aa17.01■□□□□ 0.31
TMEFF1-201ENST00000374879 ZNF835Q9Y2P0 537 aa17.01■□□□□ 0.31
TMEFF1-201ENST00000374879 CRXO43186 299 aaPredicted RBP17■□□□□ 0.31
TMEFF1-201ENST00000374879 EIF4EBP1Q13541 118 aaPredicted RBP17■□□□□ 0.31
TMEFF1-201ENST00000374879 MOB1BQ7L9L4 216 aa17■□□□□ 0.31
TMEFF1-201ENST00000374879 SYS1-DBNDD2H3BUS1 97 aa17■□□□□ 0.31
TMEFF1-201ENST00000374879 GNG7O60262 68 aa17■□□□□ 0.31
TMEFF1-201ENST00000374879 MFAP2P55001 183 aa17■□□□□ 0.31
TMEFF1-201ENST00000374879 NHLH1Q02575 133 aa17■□□□□ 0.31
TMEFF1-201ENST00000374879 Q5PR19 223 aa17■□□□□ 0.31
TMEFF1-201ENST00000374879 LYSMD4Q5XG99 296 aa17■□□□□ 0.31
TMEFF1-201ENST00000374879 NHLRC2Q8NBF2 726 aa17■□□□□ 0.31
TMEFF1-201ENST00000374879 WISP2O76076 250 aa17■□□□□ 0.31
TMEFF1-201ENST00000374879 IGHV3-9P01782 118 aa17■□□□□ 0.31
TMEFF1-201ENST00000374879 SAMD13Q5VXD3 122 aa17■□□□□ 0.31
TMEFF1-201ENST00000374879 MCRIP2Q9BUT9 160 aaKnown RBP17■□□□□ 0.31
TMEFF1-201ENST00000374879 WDR54Q9H977 334 aa17■□□□□ 0.31
TMEFF1-201ENST00000374879 IGHV1-45A0A0A0MS14 117 aa16.99■□□□□ 0.31
TMEFF1-201ENST00000374879 TNFSF15O95150 251 aa16.99■□□□□ 0.31
TMEFF1-201ENST00000374879 LIFP15018 202 aa16.99■□□□□ 0.31
TMEFF1-201ENST00000374879 HIST1H1AQ02539 215 aaPredicted RBP16.99■□□□□ 0.31
TMEFF1-201ENST00000374879 CATR1Q13166 79 aa16.99■□□□□ 0.31
TMEFF1-201ENST00000374879 LOC102723996A0A087X1L8 192 aa16.99■□□□□ 0.31
TMEFF1-201ENST00000374879 PPIAL4DF5H284 164 aa16.99■□□□□ 0.31
TMEFF1-201ENST00000374879 ACTL6BO94805 426 aa16.99■□□□□ 0.31
TMEFF1-201ENST00000374879 OR9G9P0C7N8 305 aa16.99■□□□□ 0.31
TMEFF1-201ENST00000374879 PSG5Q15238 335 aa16.99■□□□□ 0.31
TMEFF1-201ENST00000374879 SLC35E4Q6ICL7 350 aa16.99■□□□□ 0.31
TMEFF1-201ENST00000374879 MIR17HGQ75NE6 70 aa16.99■□□□□ 0.31
TMEFF1-201ENST00000374879 STPG3Q8N7X2 389 aa16.99■□□□□ 0.31
TMEFF1-201ENST00000374879 WIPF2Q8TF74 440 aaPredicted RBP16.99■□□□□ 0.31
TMEFF1-201ENST00000374879 PROK2Q9HC23 129 aa16.99■□□□□ 0.31
TMEFF1-201ENST00000374879 NPVFQ9HCQ7 196 aa16.99■□□□□ 0.31
TMEFF1-201ENST00000374879 C5orf49A4QMS7 147 aa16.98■□□□□ 0.31
TMEFF1-201ENST00000374879 DSCR4P56555 118 aaPredicted RBP16.98■□□□□ 0.31
TMEFF1-201ENST00000374879 SF3B5Q9BWJ5 86 aaKnown RBP16.98■□□□□ 0.31
TMEFF1-201ENST00000374879 PRSS46E5RG02 174 aa16.98■□□□□ 0.31
TMEFF1-201ENST00000374879 OR2H2O95918 312 aa16.98■□□□□ 0.31
TMEFF1-201ENST00000374879 NGFP01138 241 aa16.98■□□□□ 0.31
TMEFF1-201ENST00000374879 GPR183P32249 361 aa16.98■□□□□ 0.31
TMEFF1-201ENST00000374879 FAM214BQ7L5A3 538 aa16.98■□□□□ 0.31
TMEFF1-201ENST00000374879 ZBTB34Q8NCN2 500 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms