RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 ADTRPQ96IZ2 230 aa12.69□□□□□ -0.38
CCDC40-202ENST00000374876 C12orf57Q99622 126 aa12.69□□□□□ -0.38
CCDC40-202ENST00000374876 MANBALQ9NQG1 85 aa12.69□□□□□ -0.38
CCDC40-202ENST00000374876 ZNF469Q96JG9 3925 aaPredicted RBP12.68□□□□□ -0.38
CCDC40-202ENST00000374876 LYNX1G3V0Z9 82 aa12.68□□□□□ -0.38
CCDC40-202ENST00000374876 UBE2CO00762 179 aa12.68□□□□□ -0.38
CCDC40-202ENST00000374876 LYNX1P0DP58 116 aa12.68□□□□□ -0.38
CCDC40-202ENST00000374876 GNG10P50151 68 aa12.68□□□□□ -0.38
CCDC40-202ENST00000374876 CD81P60033 236 aa12.68□□□□□ -0.38
CCDC40-202ENST00000374876 TGIF2LYQ8IUE0 185 aa12.68□□□□□ -0.38
CCDC40-202ENST00000374876 RHOVQ96L33 236 aa12.68□□□□□ -0.38
CCDC40-202ENST00000374876 DIRC2Q96SL1 478 aa12.68□□□□□ -0.38
CCDC40-202ENST00000374876 SDF2L1Q9HCN8 221 aa12.68□□□□□ -0.38
CCDC40-202ENST00000374876 NKX6-3A6NJ46 265 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 RRHO14718 337 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 TMPRSS2O15393 492 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 TMEM30BQ3MIR4 351 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 ZNF439Q8NDP4 499 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 GGACTQ9BVM4 153 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 DCAF16Q9NXF7 216 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 TCF19Q9Y242 345 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 hADV38S2A0JD32 116 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 PCP4L1A6NKN8 68 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 C15orf61A6NNL5 157 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 MPDU1O75352 247 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 NDUFB7P17568 137 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 CDC34P49427 236 aaPredicted RBP12.67□□□□□ -0.38
CCDC40-202ENST00000374876 ERVFRD-1P60508 538 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 FABP9Q0Z7S8 132 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 ZNF674Q2M3X9 581 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 WDR25Q64LD2 544 aaPredicted RBP12.67□□□□□ -0.38
CCDC40-202ENST00000374876 OR4A47Q6IF82 309 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 CORO2AQ92828 525 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 SMIM7Q9BQ49 75 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 LINC00574Q9H8X3 128 aa12.67□□□□□ -0.38
CCDC40-202ENST00000374876 METTL1Q9UBP6 276 aaKnown RBP12.67□□□□□ -0.38
CCDC40-202ENST00000374876 SOX15O60248 233 aa12.66□□□□□ -0.38
CCDC40-202ENST00000374876 CXCL1P09341 107 aa12.66□□□□□ -0.38
CCDC40-202ENST00000374876 COL8A2P25067 703 aa12.66□□□□□ -0.38
CCDC40-202ENST00000374876 CLEC12BQ2HXU8 276 aa12.66□□□□□ -0.38
CCDC40-202ENST00000374876 ABHD12Q8N2K0 398 aa12.66□□□□□ -0.38
CCDC40-202ENST00000374876 ZNF383Q8NA42 475 aa12.66□□□□□ -0.38
CCDC40-202ENST00000374876 NEU4Q8WWR8 484 aaPredicted RBP12.66□□□□□ -0.38
CCDC40-202ENST00000374876 Q96MF0 132 aa12.66□□□□□ -0.38
CCDC40-202ENST00000374876 TMEM242Q9NWH2 141 aa12.66□□□□□ -0.38
CCDC40-202ENST00000374876 NAT8Q9UHE5 227 aa12.66□□□□□ -0.38
CCDC40-202ENST00000374876 TGIF2-C20orf24A0A0A6YYL0 155 aa12.66□□□□□ -0.38
CCDC40-202ENST00000374876 TMEM250H0YL14 139 aa12.66□□□□□ -0.38
CCDC40-202ENST00000374876 HRASP01112 189 aa12.66□□□□□ -0.38
CCDC40-202ENST00000374876 MEOX2P50222 304 aa12.66□□□□□ -0.38
CCDC40-202ENST00000374876 Q8N7P7 452 aa12.66□□□□□ -0.38
CCDC40-202ENST00000374876 OR4F5Q8NH21 305 aa12.66□□□□□ -0.38
CCDC40-202ENST00000374876 OR4F4Q96R69 305 aa12.66□□□□□ -0.38
CCDC40-202ENST00000374876 ENY2Q9NPA8 101 aa12.66□□□□□ -0.38
CCDC40-202ENST00000374876 RPUSD1Q9UJJ7 312 aaKnown RBP12.66□□□□□ -0.38
CCDC40-202ENST00000374876 FOXA2Q9Y261 457 aaPredicted RBP12.66□□□□□ -0.38
CCDC40-202ENST00000374876 ITPR3Q14573 2671 aa12.65□□□□□ -0.38
CCDC40-202ENST00000374876 CLDN34H7C241 214 aa12.65□□□□□ -0.38
CCDC40-202ENST00000374876 AP4M1O00189 453 aa12.65□□□□□ -0.38
CCDC40-202ENST00000374876 MMP23AO75900 390 aa12.65□□□□□ -0.38
CCDC40-202ENST00000374876 IGHV2-5P01817 119 aa12.65□□□□□ -0.38
CCDC40-202ENST00000374876 DEFA4P12838 97 aa12.65□□□□□ -0.38
CCDC40-202ENST00000374876 TMEM241Q24JQ0 296 aa12.65□□□□□ -0.38
CCDC40-202ENST00000374876 PRSS57Q6UWY2 283 aa12.65□□□□□ -0.38
CCDC40-202ENST00000374876 TREML4Q6UXN2 200 aa12.65□□□□□ -0.38
CCDC40-202ENST00000374876 GATAD1Q8WUU5 269 aa12.65□□□□□ -0.38
CCDC40-202ENST00000374876 RPUSD4Q96CM3 377 aaKnown RBP12.65□□□□□ -0.38
CCDC40-202ENST00000374876 TMEM14BQ9NUH8 114 aa12.65□□□□□ -0.38
CCDC40-202ENST00000374876 LINC00312Q9Y6C7 94 aa12.65□□□□□ -0.38
CCDC40-202ENST00000374876 TRAV38-1A0A0B4J264 116 aa12.64□□□□□ -0.39
CCDC40-202ENST00000374876 KBTBD11O94819 623 aa12.64□□□□□ -0.39
CCDC40-202ENST00000374876 HSPE1P61604 102 aaKnown RBP12.64□□□□□ -0.39
CCDC40-202ENST00000374876 ADIRFQ15847 76 aa12.64□□□□□ -0.39
CCDC40-202ENST00000374876 CYP2G1PQ6ZSU1 146 aa12.64□□□□□ -0.39
CCDC40-202ENST00000374876 SLC25A48Q6ZT89 311 aaKnown RBP12.64□□□□□ -0.39
CCDC40-202ENST00000374876 GAL3ST2Q9H3Q3 398 aa12.64□□□□□ -0.39
CCDC40-202ENST00000374876 SAP30LQ9HAJ7 183 aa12.64□□□□□ -0.39
CCDC40-202ENST00000374876 SLC25A10Q9UBX3 287 aaPredicted RBP12.64□□□□□ -0.39
CCDC40-202ENST00000374876 DYSFO75923 2080 aa12.64□□□□□ -0.39
CCDC40-202ENST00000374876 A0A1W2PPV4 95 aa12.64□□□□□ -0.39
CCDC40-202ENST00000374876 SEC14L6B5MCN3 397 aa12.64□□□□□ -0.39
CCDC40-202ENST00000374876 PRSS46E5RG02 174 aa12.64□□□□□ -0.39
CCDC40-202ENST00000374876 PAGE4O60829 102 aa12.64□□□□□ -0.39
CCDC40-202ENST00000374876 S100A8P05109 93 aa12.64□□□□□ -0.39
CCDC40-202ENST00000374876 OPRK1P41145 380 aa12.64□□□□□ -0.39
CCDC40-202ENST00000374876 KIAA0141Q14154 515 aaPredicted RBP12.64□□□□□ -0.39
CCDC40-202ENST00000374876 C1orf87Q8N0U7 546 aa12.64□□□□□ -0.39
CCDC40-202ENST00000374876 CTDSP1Q9GZU7 261 aa12.64□□□□□ -0.39
CCDC40-202ENST00000374876 DSCAML1Q8TD84 2053 aa12.63□□□□□ -0.39
CCDC40-202ENST00000374876 IGHV4-30-2A0A087WSY4 118 aa12.63□□□□□ -0.39
CCDC40-202ENST00000374876 NPY1RP25929 384 aa12.63□□□□□ -0.39
CCDC40-202ENST00000374876 RTL8BQ17RB0 113 aa12.63□□□□□ -0.39
CCDC40-202ENST00000374876 GCSAMLQ5JQS6 135 aa12.63□□□□□ -0.39
CCDC40-202ENST00000374876 CLEC2AQ6UVW9 174 aa12.63□□□□□ -0.39
CCDC40-202ENST00000374876 SLC24A4Q8NFF2 622 aa12.63□□□□□ -0.39
CCDC40-202ENST00000374876 TMEM170AQ8WVE7 144 aa12.63□□□□□ -0.39
CCDC40-202ENST00000374876 FAM168AQ92567 244 aa12.63□□□□□ -0.39
CCDC40-202ENST00000374876 PARLQ9H300 379 aa12.63□□□□□ -0.39
CCDC40-202ENST00000374876 CELSR1Q9NYQ6 3014 aa12.63□□□□□ -0.39
CCDC40-202ENST00000374876 TANC2Q9HCD6 1990 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms