RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 AMY1AP04745 511 aa9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 PDLIM3Q53GG5 364 aaPredicted RBP9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 ZNF766Q5HY98 468 aa9.61□□□□□ -0.87
SMARCA1-201ENST00000371121 LOC102724200A0A096LPH7 203 aaPredicted RBP9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 hDV102S1A0JD36 115 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 GPR6P46095 362 aaPredicted RBP9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 VEGFBP49765 207 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 RPL8P62917 257 aaKnown RBP9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 PRR20EP86478 221 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 PRR20CP86479 221 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 PRR20DP86480 221 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 PRR20BP86481 221 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 PRR20AP86496 221 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 ZNF841Q6ZN19 808 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 COQ2Q96H96 371 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 ZNF146Q15072 292 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 STPG3Q8N7X2 389 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 NHLRC2Q8NBF2 726 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 CACNA1DQ01668 2161 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 RELNP78509 3460 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 PIGBOS1A0A0B4J2F0 54 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 KLF7O75840 302 aaPredicted RBP9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 PCBD1P61457 104 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 KLF5Q13887 457 aaPredicted RBP9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 MORN5Q5VZ52 161 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 MOB3BQ86TA1 216 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 SCCPDHQ8NBX0 429 aa9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 SSBP4Q9BWG4 385 aaPredicted RBP9.6□□□□□ -0.87
SMARCA1-201ENST00000371121 OVOL3O00110 214 aa9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 MT-ND6P03923 174 aa9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 NPY1RP25929 384 aa9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 RPS20P60866 119 aaKnown RBP9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 PSG9Q00887 426 aa9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 FOXF2Q12947 444 aa9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 ALKBH6Q3KRA9 238 aa9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 MRPL21Q7Z2W9 205 aaKnown RBP9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 SSBP3Q9BWW4 388 aaPredicted RBP9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 RBM7Q9Y580 266 aaKnown RBP9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 SELENOKQ9Y6D0 94 aa9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 ISLRO14498 428 aa9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 DNPH1O43598 174 aa9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 OTX2P32243 289 aa9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 KLHDC1Q8N7A1 406 aa9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 WIPF2Q8TF74 440 aaPredicted RBP9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 MCRIP2Q9BUT9 160 aaKnown RBP9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 C7orf69Q9H7B7 122 aa9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 OSTCQ9NRP0 149 aa9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 WIPI1Q5MNZ9 446 aaPredicted RBP9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 WFDC8Q8IUA0 241 aa9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 TMEM45BQ96B21 275 aa9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 METRNQ9UJH8 293 aa9.59□□□□□ -0.87
SMARCA1-201ENST00000371121 DOCK10Q96BY6 2186 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 APCSP02743 223 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 ARR3P36575 388 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 NRN1LQ496H8 165 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 UFSP1Q6NVU6 142 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 C2orf91Q6ZV80 131 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 H2BFWTQ7Z2G1 175 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 PKIBQ9C010 78 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 SCRT2Q9NQ03 307 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 OCIAD1Q9NX40 245 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 GAGE12BA1L429 117 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 MT-CO3P00414 261 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 HBZP02008 142 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 MYOD1P15172 320 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 LTBRP36941 435 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 HTD2P86397 168 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 Q0VFX4 171 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 VAMP3Q15836 100 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 WDR73Q6P4I2 378 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 SYT13Q7L8C5 426 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 MOB1BQ7L9L4 216 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 BCL2L2Q92843 193 aaPredicted RBP9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 DMXL1Q9Y485 3027 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 IGHV5-10-1A0A0J9YXX1 117 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 HELTA6NFD8 242 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 WNT9BO14905 357 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 AGFG2O95081 481 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 NBEAP1P0C6P0 100 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 GNG4P50150 75 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 GNG3P63215 75 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 TPRX1Q8N7U7 411 aa9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 CHTOPQ9Y3Y2 248 aaKnown RBP9.58□□□□□ -0.88
SMARCA1-201ENST00000371121 IGHV3-43A0A0B4J1X8 118 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 CORTO00230 105 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 MPDU1O75352 247 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 NUDT3O95989 172 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 IGHV3-43DP0DP04 118 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 DUTP33316 252 aaKnown RBP9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 AESQ08117 197 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 JMJD8Q96S16 334 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 DEFB108AA8MXU0 73 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 HLA-DQA1P01909 254 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 IGFBP2P18065 325 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 RIPPLY3P57055 190 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 UBE2G1P62253 170 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 RPL19P84098 196 aaKnown RBP9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 OR4A47Q6IF82 309 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 VPS25Q9BRG1 176 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 IZUMO1RA6ND01 250 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms