RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 WDR13Q9H1Z4 485 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 OR2D2Q9H210 308 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 TMEM45AQ9NWC5 275 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 LAMTOR3Q9UHA4 124 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 RIMS3Q9UJD0 308 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 OR2W1Q9Y3N9 320 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 V9GYS6 101 aa2.77□□□□□ -1.97
ECHDC1-205ENST00000368295 A0A0B4J2A0 478 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 FAM236DA0A1B0GTK5 79 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 IFITM5A6NNB3 132 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 FABP5P3A8MUU1 101 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 H3BQF6 201 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 RBFOX2O43251 390 aaKnown RBP eCLIP2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 IGKV1D-16P01601 117 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 FAM236CP0DP71 79 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 RPL7P18124 248 aaKnown RBP2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 GGT1P19440 569 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 PRTN3P24158 256 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 MYCNOSP40205 109 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 RFX2P48378 723 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 POLR2HP52434 150 aaKnown RBP2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 CRYBA2P53672 197 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 NANOS3P60323 173 aaKnown RBP2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 HIST1H1AQ02539 215 aaPredicted RBP2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 BTN1A1Q13410 526 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 C1DQ13901 141 aaKnown RBP2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 SCGB2B2Q4G0G5 96 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 LINC00242Q5T6M2 205 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 IL34Q6ZMJ4 242 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 DGAT2L6Q6ZPD8 337 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 NUP35Q8NFH5 326 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 OR4M1Q8NGD0 313 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 OR10G6Q8NH81 332 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 PCNPQ8WW12 178 aaKnown RBP2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 FAM19A4Q96LR4 140 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 C17orf77Q96MU5 243 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 LPAR5Q9H1C0 372 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 PTGES2Q9H7Z7 377 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 GNB4Q9HAV0 340 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 NOX3Q9HBY0 568 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 RBFOX1Q9NWB1 397 aaKnown RBP2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 SHPKQ9UHJ6 478 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 ZNF835Q9Y2P0 537 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 C5orf49A4QMS7 147 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 RBFOX3A6NFN3 312 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 OR4C45A6NMZ5 311 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 SHISA9B4DS77 424 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 ZNF354AO60765 605 aaPredicted RBP2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 IGHMP01871 453 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 LMO1P25800 156 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 CERS1P27544 350 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 GFERP55789 205 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 TAS2R20P59543 309 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 DAD1P61803 113 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 MXD1Q05195 221 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 PRDX4Q13162 271 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 NSUN5P1Q3KNT7 163 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 NCMAPQ5T1S8 102 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 IBA57Q5T440 356 aaKnown RBP2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 PRSS54Q6PEW0 395 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 NOTCH2NLQ7Z3S9 236 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 C11orf53Q8IXP5 236 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 TMEM86AQ8N2M4 240 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 DEFB125Q8N687 156 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 TMEM229BQ8NBD8 167 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 OR13C8Q8NGS7 320 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 OR2T6Q8NHC8 308 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 ZNF420Q8TAQ5 688 aaPredicted RBP2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 PHYHIPLQ96FC7 376 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 SAMD10Q9BYL1 202 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 REG4Q9BYZ8 158 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 SMIM3Q9BZL3 60 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 OR52D1Q9H346 318 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 MED11Q9P086 117 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 RNF7Q9UBF6 113 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 KLK11Q9UBX7 282 aa2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 ZNF256Q9Y2P7 627 aaPredicted RBP2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 KLF13Q9Y2Y9 288 aaPredicted RBP2.76□□□□□ -1.97
ECHDC1-205ENST00000368295 HECTD4Q9Y4D8 3996 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 SCN2AQ99250 2005 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 TRAV26-2A0A0B4J265 109 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 IGHV3OR16-9A0A0B4J2B5 98 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 DUXBA0A1W2PPF3 345 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 FAM183AA6NL82 134 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 C9JAW5 83 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 I3L521 148 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 CCL25O15444 150 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 TRAF3IP2O43734 574 aaPredicted RBP2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 TBL1XO60907 577 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 NPIPB7O75200 414 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 AIFM1O95831 613 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 OR2H2O95918 312 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 FABP3P05413 133 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 ATP5G1P05496 136 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 H2AFZP0C0S5 128 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 NHLRC4P0CG21 123 aaPredicted RBP2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 IGHV4-30-4P0DP06 118 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 SPNP16150 400 aa2.75□□□□□ -1.97
ECHDC1-205ENST00000368295 FCGR2CP31995 323 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms