RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 SLC35A2P78381 396 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 IL5RAQ01344 420 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 PRDX4Q13162 271 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 MADCAM1Q13477 382 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 CT45A1Q5HYN5 189 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 OR52W1Q6IF63 320 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 CROCCP2Q86T23 111 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 PCP2Q8IVA1 136 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 JAGN1Q8N5M9 183 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 OR11H6Q8NGC7 330 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 OR10G4Q8NGN3 311 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 OR52E5Q8NH55 327 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 CT45A3Q8NHU0 189 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 RNF133Q8WVZ7 376 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 SRSF12Q8WXF0 261 aaKnown RBP3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 LZICQ8WZA0 190 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 AQP3Q92482 292 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 RCN3Q96D15 328 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 MALSU1Q96EH3 234 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 RNF170Q96K19 258 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 MICU1Q9BPX6 476 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 NSRP1Q9H0G5 558 aaKnown RBP3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 DNAJC27Q9NZQ0 273 aa3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 TSSC4Q9Y5U2 329 aaPredicted RBP3.57□□□□□ -1.84
RNU4-39P-201ENST00000362455 TET2Q6N021 2002 aaPredicted RBP3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 DNAH10Q8IVF4 4471 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 A0A096LNJ9 63 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 LCE6AA0A183 80 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 INS-IGF2F8WCM5 200 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 K7EMT4 169 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 ZNF737O75373 536 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 IGHV1-8P0DP01 117 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 PIPP12273 146 aaPredicted RBP3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 RAB3BP20337 219 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 ABCA11PQ4W5N1 156 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 UBE2UQ5VVX9 321 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 LCN8Q6JVE9 175 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 Q8N976 141 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 PROKR2Q8NFJ6 384 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 OR8B12Q8NGG6 310 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 OR2T27Q8NH04 317 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 MUC7Q8TAX7 377 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 RPS4Y2Q8TD47 263 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 ATP6V1G3Q96LB4 118 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 CHID1Q9BWS9 393 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 SLC25A2Q9BXI2 301 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 ANKRD60Q9BZ19 345 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 ISYNA1Q9NPH2 558 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 TAS2R1Q9NYW7 299 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 IL20Q9NYY1 176 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 CD300AQ9UGN4 299 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 HHLA2Q9UM44 414 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 HILPDAQ9Y5L2 63 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 MPC1Q9Y5U8 109 aa3.56□□□□□ -1.84
RNU4-39P-201ENST00000362455 ALMS1Q8TCU4 4167 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 IGHV3-74A0A0B4J1X5 117 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 IGHV3-66A0A0C4DH42 116 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 TMEM210A6NLX4 147 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 BBIP1A8MTZ0 92 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 ZNF878C9JN71 531 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 NOS1APO75052 506 aaPredicted RBP3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 GABARAPO95166 117 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 IGLV3-1P01715 115 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 UBCP0CG48 685 aaKnown RBP3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 PGA5P0DJD9 388 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 ZNF728P0DKX0 622 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 CTRB1P17538 263 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 CEACAM3P40198 252 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 HCCSP53701 268 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 UBE2MP61081 183 aaKnown RBP3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 HERVK_113P61574 105 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 GRB2P62993 217 aaKnown RBP3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 TSPAN31Q12999 210 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 GINS1Q14691 196 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 CEACAM21Q3KPI0 293 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 GLYATQ6IB77 296 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 HAGHLQ6PII5 290 aaPredicted RBP3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 OR2W3Q7Z3T1 314 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 CALHM1Q8IU99 346 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 SBSPONQ8IVN8 264 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 OR4P4Q8NGL7 312 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 OR2T4Q8NH00 348 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 ZNF596Q8TC21 504 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 GLYATL2Q8WU03 294 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 RBMXL1Q96E39 390 aaKnown RBP3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 CHAC1Q9BUX1 264 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 RTL8AQ9BWD3 113 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 NDEL1Q9GZM8 345 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 IFI27L2Q9H2X8 130 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 HES4Q9HCC6 221 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 GID8Q9NWU2 228 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 USE1Q9NZ43 259 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 TBL2Q9Y4P3 447 aaKnown RBP3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 V9GYQ6 96 aa3.55□□□□□ -1.84
RNU4-39P-201ENST00000362455 IGKV1-27A0A075B6S5 117 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 IGHV2-26A0A0B4J1V2 119 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 FAM183AA6NL82 134 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 LY6LH3BQJ8 138 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms