RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 FAM216BQ8N7L0 139 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 OR52E5Q8NH55 327 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 NABP1Q96AH0 204 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 RTN4RQ9BZR6 473 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 C15orf61A6NNL5 157 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 UBE2L6O14933 153 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 AMY1AP04745 511 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 IL4P05112 153 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 RNF5Q99942 180 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 KIAA2026Q5HYC2 2103 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 MINOS1Q5TGZ0 78 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 UNQ6494/PRO21346Q6UXR6 183 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 LYZL4Q96KX0 146 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 DUX5Q96PT3 197 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 NPCDR1Q9BY65 106 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 C21orf62Q9NYP8 219 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 MINOS1-NBL1R4GNA1 71 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 SHISA3A0PJX4 238 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 CA2P00918 260 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 EFNA4P52798 201 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 DLX1P56177 255 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 CX3CL1P78423 397 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 PAPPA-AS1Q5QFB9 102 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 FMC1Q96HJ9 113 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 PACRGQ96M98 296 aaPredicted RBP4.08□□□□□ -1.76
SCN3A-202ENST00000360093 COL25A1Q9BXS0 654 aaPredicted RBP4.08□□□□□ -1.76
SCN3A-202ENST00000360093 SLC25A15Q9Y619 301 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 SPTBN1Q01082 2364 aaKnown RBP4.08□□□□□ -1.76
SCN3A-202ENST00000360093 RIF1Q5UIP0 2472 aaKnown RBP4.08□□□□□ -1.76
SCN3A-202ENST00000360093 A0A1B0GW15 77 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 GPX1P07203 203 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 AGAP20933 346 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 ZP1P60852 638 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 SMUG1Q53HV7 270 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 ISOC2Q96AB3 205 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 PRSS22Q9GZN4 317 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 MAP1LC3AQ9H492 121 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 C2orf68Q2NKX9 166 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 Q6AWC8 147 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 TMEM144Q7Z5S9 345 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 C18orf12Q96KH6 178 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 TMEM70Q9BUB7 260 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 IFT22Q9H7X7 185 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 AP5S1Q9NUS5 200 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 SOX21Q9Y651 276 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-202ENST00000360093 UPK2O00526 184 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 CSN3P07498 182 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 ANOS1P23352 680 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 MST1P26927 711 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 FAM159AQ6UWV7 190 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 IGFL3Q6UXB1 125 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 FBXL15Q9H469 300 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 TRAV9-1A0A075B6T8 112 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 TGFAP01135 160 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 REG1AP05451 166 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 NBEAP1P0C6P0 100 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 PAX1P15863 534 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 GCHFRP30047 84 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 CYB5R2Q6BCY4 276 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 PVRIGQ6DKI7 326 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 SCGB1D4Q6XE38 83 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 SDHCQ99643 169 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-202ENST00000360093 FBXL7Q9UJT9 491 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 GVINP1Q7Z2Y8 2422 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 IGKV1-9A0A0C4DH69 117 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 H7C1H1 209 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 J3KRW8 73 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 Q0VFX4 171 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 PMCHL1Q16048 86 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 ATG101Q9BSB4 218 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 TRBV6-6A0A0A6YYG2 114 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 IGHV1-46P01743 117 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 FOXL2NBQ6ZUU3 175 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 GTF2H5Q6ZYL4 71 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 TRAV24A0A0B4J272 114 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 C17orf98A8MV24 154 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 M0R1W7 72 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 ZNHIT1O43257 154 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 IL6RP08887 468 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-202ENST00000360093 PLA2G2CQ5R387 149 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 LRTM2Q8N967 370 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 SFRP2Q96HF1 295 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 ZNF257Q9Y2Q1 563 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 PCNX2A6NKB5 2137 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 SAA2-SAA4A0A096LPE2 208 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 TMEM238LA0A1B0GVL6 79 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 A6NJY4 79 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 K7ENP7 123 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 EFNA2O43921 213 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 CD5P06127 495 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 STAG3L2P0CL84 134 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 SAA2P0DJI9 122 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-202ENST00000360093 CMC4P56277 68 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-202ENST00000360093 PSMG4Q5JS54 123 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 MRPL20Q9BYC9 149 aaKnown RBP4.07□□□□□ -1.76
SCN3A-202ENST00000360093 ZMAT5Q9UDW3 170 aaKnown RBP4.07□□□□□ -1.76
SCN3A-202ENST00000360093 LTBP2Q14767 1821 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 ZNF407Q9C0G0 2248 aa4.07□□□□□ -1.76
SCN3A-202ENST00000360093 FAM71F2Q6NXP2 309 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 ERASQ7Z444 233 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms