RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 COMMD1Q8N668 190 aa18.34■□□□□ 0.53
SCAMP3-202ENST00000355379 NRGNQ92686 78 aa18.34■□□□□ 0.53
SCAMP3-202ENST00000355379 FNDC10F2Z333 226 aa18.33■□□□□ 0.53
SCAMP3-202ENST00000355379 SLC25A16P16260 332 aa18.33■□□□□ 0.53
SCAMP3-202ENST00000355379 FAM213BQ8TBF2 198 aa18.33■□□□□ 0.53
SCAMP3-202ENST00000355379 LPAR2Q9HBW0 351 aa18.33■□□□□ 0.53
SCAMP3-202ENST00000355379 WDR83OSQ9Y284 106 aa18.33■□□□□ 0.53
SCAMP3-202ENST00000355379 FBXO7Q9Y3I1 522 aa18.33■□□□□ 0.53
SCAMP3-202ENST00000355379 MYO18BQ8IUG5 2567 aa18.33■□□□□ 0.53
SCAMP3-202ENST00000355379 KMT2BQ9UMN6 2715 aaPredicted RBP18.33■□□□□ 0.52
SCAMP3-202ENST00000355379 CGB1A6NKQ9 187 aa18.33■□□□□ 0.52
SCAMP3-202ENST00000355379 FGF7P21781 194 aa18.33■□□□□ 0.52
SCAMP3-202ENST00000355379 CNTFRP26992 372 aa18.33■□□□□ 0.52
SCAMP3-202ENST00000355379 TPSG1Q9NRR2 321 aa18.33■□□□□ 0.52
SCAMP3-202ENST00000355379 METTL1Q9UBP6 276 aaKnown RBP18.33■□□□□ 0.52
SCAMP3-202ENST00000355379 A0A1W2PRD5 423 aa18.32■□□□□ 0.52
SCAMP3-202ENST00000355379 A0A1W2PRF3 423 aa18.32■□□□□ 0.52
SCAMP3-202ENST00000355379 A0A1W2PRM7 423 aa18.32■□□□□ 0.52
SCAMP3-202ENST00000355379 KRBOX1C9JBD0 128 aa18.32■□□□□ 0.52
SCAMP3-202ENST00000355379 J3QKU1 62 aa18.32■□□□□ 0.52
SCAMP3-202ENST00000355379 MPDU1O75352 247 aa18.32■□□□□ 0.52
SCAMP3-202ENST00000355379 RNASE2P10153 161 aaKnown RBP18.32■□□□□ 0.52
SCAMP3-202ENST00000355379 FHITP49789 147 aa18.32■□□□□ 0.52
SCAMP3-202ENST00000355379 ZNF616Q08AN1 781 aa18.32■□□□□ 0.52
SCAMP3-202ENST00000355379 PPP1R27Q86WC6 154 aa18.32■□□□□ 0.52
SCAMP3-202ENST00000355379 MRPL41Q8IXM3 137 aaKnown RBP18.32■□□□□ 0.52
SCAMP3-202ENST00000355379 MALSU1Q96EH3 234 aa18.32■□□□□ 0.52
SCAMP3-202ENST00000355379 TNCP24821 2201 aa18.32■□□□□ 0.52
SCAMP3-202ENST00000355379 E7EUB6 86 aa18.31■□□□□ 0.52
SCAMP3-202ENST00000355379 TSPAN15O95858 294 aa18.31■□□□□ 0.52
SCAMP3-202ENST00000355379 MOSP00540 346 aa18.31■□□□□ 0.52
SCAMP3-202ENST00000355379 ZP3P21754 424 aa18.31■□□□□ 0.52
SCAMP3-202ENST00000355379 NPBQ8NG41 125 aa18.31■□□□□ 0.52
SCAMP3-202ENST00000355379 OR10W1Q8NGF6 305 aa18.31■□□□□ 0.52
SCAMP3-202ENST00000355379 AKAP6Q13023 2319 aa18.3■□□□□ 0.52
SCAMP3-202ENST00000355379 C17orf112F2Z3M2 114 aa18.3■□□□□ 0.52
SCAMP3-202ENST00000355379 SOX15O60248 233 aa18.3■□□□□ 0.52
SCAMP3-202ENST00000355379 SNCAP37840 140 aa18.3■□□□□ 0.52
SCAMP3-202ENST00000355379 EBI3Q14213 229 aa18.3■□□□□ 0.52
SCAMP3-202ENST00000355379 SSX2Q16385 188 aa18.3■□□□□ 0.52
SCAMP3-202ENST00000355379 CLEC12BQ2HXU8 276 aa18.3■□□□□ 0.52
SCAMP3-202ENST00000355379 OR2T10Q8NGZ9 312 aa18.3■□□□□ 0.52
SCAMP3-202ENST00000355379 NDUFA3O95167 84 aa18.29■□□□□ 0.52
SCAMP3-202ENST00000355379 IGKV1D-33P01593 117 aa18.29■□□□□ 0.52
SCAMP3-202ENST00000355379 IGKV1-33P01594 117 aa18.29■□□□□ 0.52
SCAMP3-202ENST00000355379 RPL27AP46776 148 aaKnown RBP18.29■□□□□ 0.52
SCAMP3-202ENST00000355379 COMPP49747 757 aaPredicted RBP18.29■□□□□ 0.52
SCAMP3-202ENST00000355379 TUSC1Q2TAM9 212 aa18.29■□□□□ 0.52
SCAMP3-202ENST00000355379 TMEM41BQ5BJD5 291 aa18.29■□□□□ 0.52
SCAMP3-202ENST00000355379 ZNF709Q8N972 641 aa18.29■□□□□ 0.52
SCAMP3-202ENST00000355379 LFNGQ8NES3 379 aa18.29■□□□□ 0.52
SCAMP3-202ENST00000355379 C1orf159Q96HA4 380 aa18.29■□□□□ 0.52
SCAMP3-202ENST00000355379 EAF1Q96JC9 268 aaPredicted RBP18.29■□□□□ 0.52
SCAMP3-202ENST00000355379 NPCDR1Q9BY65 106 aa18.29■□□□□ 0.52
SCAMP3-202ENST00000355379 NPVFQ9HCQ7 196 aa18.29■□□□□ 0.52
SCAMP3-202ENST00000355379 BEX4Q9NWD9 120 aaPredicted RBP18.29■□□□□ 0.52
SCAMP3-202ENST00000355379 SPTAN1Q13813 2472 aaKnown RBP18.29■□□□□ 0.52
SCAMP3-202ENST00000355379 BTBD17A6NE02 478 aa18.28■□□□□ 0.52
SCAMP3-202ENST00000355379 ACTL6BO94805 426 aa18.28■□□□□ 0.52
SCAMP3-202ENST00000355379 COL8A1P27658 744 aa18.28■□□□□ 0.52
SCAMP3-202ENST00000355379 SUB1P53999 127 aaKnown RBP eCLIP18.28■□□□□ 0.52
SCAMP3-202ENST00000355379 C10orf55Q5SWW7 151 aa18.28■□□□□ 0.52
SCAMP3-202ENST00000355379 DYNAPQ8N1N2 210 aa18.28■□□□□ 0.52
SCAMP3-202ENST00000355379 A0A1B0GW64 132 aa18.28■□□□□ 0.52
SCAMP3-202ENST00000355379 NBR2O15453 112 aa18.28■□□□□ 0.52
SCAMP3-202ENST00000355379 MBP02144 154 aa18.28■□□□□ 0.52
SCAMP3-202ENST00000355379 H2AFB1P0C5Y9 115 aa18.28■□□□□ 0.52
SCAMP3-202ENST00000355379 TNXAQ16473 311 aa18.28■□□□□ 0.52
SCAMP3-202ENST00000355379 TREML4Q6UXN2 200 aa18.28■□□□□ 0.52
SCAMP3-202ENST00000355379 AJUBAQ96IF1 538 aa18.28■□□□□ 0.52
SCAMP3-202ENST00000355379 FBXL15Q9H469 300 aa18.28■□□□□ 0.52
SCAMP3-202ENST00000355379 RPRMQ9NS64 109 aa18.28■□□□□ 0.52
SCAMP3-202ENST00000355379 NPFFO15130 113 aa18.27■□□□□ 0.51
SCAMP3-202ENST00000355379 HBE1P02100 147 aa18.27■□□□□ 0.51
SCAMP3-202ENST00000355379 SNRNP70P08621 437 aaKnown RBP18.27■□□□□ 0.51
SCAMP3-202ENST00000355379 WT1-ASQ06250 92 aa18.27■□□□□ 0.51
SCAMP3-202ENST00000355379 ARSJQ5FYB0 599 aaPredicted RBP18.27■□□□□ 0.51
SCAMP3-202ENST00000355379 LRRC75A-AS1Q8N1F1 130 aa18.27■□□□□ 0.51
SCAMP3-202ENST00000355379 BPIFCQ8NFQ6 507 aa18.27■□□□□ 0.51
SCAMP3-202ENST00000355379 LINC00052Q96N35 136 aa18.27■□□□□ 0.51
SCAMP3-202ENST00000355379 SRSF8Q9BRL6 282 aaKnown RBP18.27■□□□□ 0.51
SCAMP3-202ENST00000355379 KIAA1456Q9P272 454 aa18.27■□□□□ 0.51
SCAMP3-202ENST00000355379 TRAV1-1A0A0B4J248 108 aa18.26■□□□□ 0.51
SCAMP3-202ENST00000355379 CENPVL3A0A0U1RRI6 287 aa18.26■□□□□ 0.51
SCAMP3-202ENST00000355379 SMCO3A2RU48 225 aa18.26■□□□□ 0.51
SCAMP3-202ENST00000355379 MSMBP08118 114 aa18.26■□□□□ 0.51
SCAMP3-202ENST00000355379 MMDQ15546 238 aa18.26■□□□□ 0.51
SCAMP3-202ENST00000355379 SPSB3Q6PJ21 355 aa18.26■□□□□ 0.51
SCAMP3-202ENST00000355379 Q8N6K4 173 aa18.26■□□□□ 0.51
SCAMP3-202ENST00000355379 MBD3L1Q8WWY6 194 aa18.26■□□□□ 0.51
SCAMP3-202ENST00000355379 LSM4Q9Y4Z0 139 aaKnown RBP18.26■□□□□ 0.51
SCAMP3-202ENST00000355379 COL12A1Q99715 3063 aa18.26■□□□□ 0.51
SCAMP3-202ENST00000355379 IGLC7A0M8Q6 106 aa18.25■□□□□ 0.51
SCAMP3-202ENST00000355379 SAA4P35542 130 aa18.25■□□□□ 0.51
SCAMP3-202ENST00000355379 GPX4P36969 197 aaPredicted RBP18.25■□□□□ 0.51
SCAMP3-202ENST00000355379 RAB2AP61019 212 aa18.25■□□□□ 0.51
SCAMP3-202ENST00000355379 PVRIGQ6DKI7 326 aa18.25■□□□□ 0.51
SCAMP3-202ENST00000355379 ZNF114Q8NC26 417 aa18.25■□□□□ 0.51
SCAMP3-202ENST00000355379 RNASEH2CQ8TDP1 164 aaKnown RBP18.25■□□□□ 0.51
SCAMP3-202ENST00000355379 C17orf50Q8WW18 174 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms