RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 FTH1P19P0C7X4 201 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 ATP5L2Q7Z4Y8 100 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 DYNLRB2Q8TF09 96 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 MARF1Q9Y4F3 1742 aaKnown RBP10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 OR9G1Q8NH87 305 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 OSR1Q8TAX0 266 aaPredicted RBP10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 TRAV24A0A0B4J272 114 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 A8MWV9 139 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 CDX4O14627 284 aaPredicted RBP10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 KLK10O43240 276 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 DPM2O94777 84 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 CCL8P80075 99 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 TEX45Q8NA69 505 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 ZNF585BQ52M93 769 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 ZNF703Q9H7S9 590 aaPredicted RBP10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 FOXI3A8MTJ6 420 aaPredicted RBP10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 REG1AP05451 166 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 UMODP07911 640 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 CKS1BP61024 79 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 ZNF56Q15929 161 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 MAJINQ3KP22 176 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 ACTL10Q5JWF8 245 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 OCC1Q8TAD7 63 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 C17orf98A8MV24 154 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 TDGF1P3P51864 188 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 ERVK11-1P61568 191 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 ZFAND6Q6FIF0 208 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 FER1L6-AS1Q8NA97 138 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 NUP37Q8NFH4 326 aa10.75□□□□□ -0.69
SYNCRIP-201ENST00000355238 A0A1W2PRE2 83 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 SYNGR3O43761 229 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 LEPP41159 167 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 KLF14Q8TD94 323 aaPredicted RBP10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 RNASEH2CQ8TDP1 164 aaKnown RBP10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 LPAR2Q9HBW0 351 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 C12orf77C9JDV5 145 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 NDUFA3O95167 84 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 CTSSP25774 331 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 TMEM144Q7Z5S9 345 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 TMEM95Q3KNT9 176 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 COL18A1P39060 1754 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 ATAD5Q96QE3 1844 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 TRAV8-4A0A0B4J246 113 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 NAPSAO96009 420 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 ESDP10768 282 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 LINC01559Q495D7 138 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 A0A1W2PQF6 199 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 TSPAN7P41732 249 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 UNQ5815/PRO19632Q6UWF5 114 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 ZNF664Q8N3J9 261 aa10.74□□□□□ -0.69
SYNCRIP-201ENST00000355238 GAGE2BQ13066 116 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 GAGE2EQ4V326 116 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 GAGE2DQ9UEU5 116 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 C1orf185Q5T7R7 199 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 RASL11AQ6T310 242 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 FAM89BQ8N5H3 189 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 FADS6Q8N9I5 356 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 NEUROG3Q9Y4Z2 214 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 NPIPB11E5RHQ5 1161 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 H7C1H1 209 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 OTORQ9NRC9 128 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 ADAMTS7Q9UKP4 1686 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 QSER1Q2KHR3 1735 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 IGKV3-11P04433 115 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 TIMP3P35625 211 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 RPL39P5Q59GN2 51 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 FAM159AQ6UWV7 190 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 STRCQ7RTU9 1775 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 DDB2Q92466 427 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 LEAP2Q969E1 77 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 NXT2Q9NPJ8 142 aaKnown RBP10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 A0A0G2JLM5 398 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 IGHV1-69-2A0A0G2JMI3 117 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 GAS1P54826 345 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 C9orf50Q5SZB4 431 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 SRXN1Q9BYN0 137 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 Q9H3A6 140 aa10.73□□□□□ -0.69
SYNCRIP-201ENST00000355238 FAM181BA6NEQ2 426 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 PROB1E7EW31 1015 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 RNFT1Q5M7Z0 435 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 TPTE2P1Q5T6R2 138 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 SHISA5Q8N114 240 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 GFI1Q99684 422 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 AGMATQ9BSE5 352 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 PAPPA2Q9BXP8 1791 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 GREM1O60565 184 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 TGFAP01135 160 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 PPBPP02775 128 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 NPPCP23582 126 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 SUMO2P61956 95 aaKnown RBP10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 ASIPP42127 132 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 TSKUQ8WUA8 353 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 PEAR1Q5VY43 1037 aaPredicted RBP10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 COQ2Q96H96 371 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 H3BRM9 83 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 FAM74A4Q5TZK3 123 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 OR13C6PQ8NH95 151 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 SMPXQ9UHP9 88 aa10.72□□□□□ -0.69
SYNCRIP-201ENST00000355238 GZMBP10144 247 aa10.71□□□□□ -0.69
SYNCRIP-201ENST00000355238 MYO7AQ13402 2215 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms