RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 OR10J4P0C629 311 aa12.73□□□□□ -0.37
LMNA-201ENST00000347559 RFPL3SP0C7P2 107 aa12.73□□□□□ -0.37
LMNA-201ENST00000347559 PSG9Q00887 426 aa12.73□□□□□ -0.37
LMNA-201ENST00000347559 GGNQ86UU5 652 aa12.73□□□□□ -0.37
LMNA-201ENST00000347559 SPACA3Q8IXA5 215 aa12.73□□□□□ -0.37
LMNA-201ENST00000347559 HES4Q9HCC6 221 aa12.73□□□□□ -0.37
LMNA-201ENST00000347559 PSG11Q9UQ72 335 aa12.73□□□□□ -0.37
LMNA-201ENST00000347559 AESQ08117 197 aa12.72□□□□□ -0.37
LMNA-201ENST00000347559 BVES-AS1Q5T3Y7 98 aa12.72□□□□□ -0.37
LMNA-201ENST00000347559 SCCPDHQ8NBX0 429 aa12.72□□□□□ -0.37
LMNA-201ENST00000347559 OR4A16Q8NH70 328 aa12.72□□□□□ -0.37
LMNA-201ENST00000347559 C11orf52Q96A22 123 aa12.72□□□□□ -0.37
LMNA-201ENST00000347559 TMEM45BQ96B21 275 aa12.72□□□□□ -0.37
LMNA-201ENST00000347559 PLEKHA3Q9HB20 300 aa12.72□□□□□ -0.37
LMNA-201ENST00000347559 CDIPTO14735 213 aa12.72□□□□□ -0.37
LMNA-201ENST00000347559 OR7C2O60412 319 aa12.72□□□□□ -0.37
LMNA-201ENST00000347559 FCGR3BO75015 233 aa12.72□□□□□ -0.37
LMNA-201ENST00000347559 OR8B3Q8NGG8 313 aa12.72□□□□□ -0.37
LMNA-201ENST00000347559 FAM216AQ8WUB2 273 aa12.72□□□□□ -0.37
LMNA-201ENST00000347559 OSTCQ9NRP0 149 aa12.72□□□□□ -0.37
LMNA-201ENST00000347559 EPOPA6NHQ4 379 aa12.71□□□□□ -0.37
LMNA-201ENST00000347559 HBZP02008 142 aa12.71□□□□□ -0.37
LMNA-201ENST00000347559 COX19Q49B96 90 aa12.71□□□□□ -0.37
LMNA-201ENST00000347559 LY96Q9Y6Y9 160 aa12.71□□□□□ -0.37
LMNA-201ENST00000347559 J3QT63 122 aa12.71□□□□□ -0.37
LMNA-201ENST00000347559 IGHV3-13P01766 116 aa12.71□□□□□ -0.37
LMNA-201ENST00000347559 IGHV3-7P01780 117 aa12.71□□□□□ -0.37
LMNA-201ENST00000347559 PCOLCEQ15113 449 aa12.71□□□□□ -0.37
LMNA-201ENST00000347559 TBR1Q16650 682 aa12.71□□□□□ -0.37
LMNA-201ENST00000347559 SLC25A45Q8N413 288 aa12.71□□□□□ -0.37
LMNA-201ENST00000347559 POM121L2Q96KW2 1035 aa12.71□□□□□ -0.37
LMNA-201ENST00000347559 TAAR6Q96RI8 345 aa12.71□□□□□ -0.37
LMNA-201ENST00000347559 HSD17B10Q99714 261 aaKnown RBP12.71□□□□□ -0.37
LMNA-201ENST00000347559 TNFRSF19Q9NS68 423 aa12.71□□□□□ -0.37
LMNA-201ENST00000347559 ZNF355PQ9NSJ1 428 aa12.71□□□□□ -0.37
LMNA-201ENST00000347559 MRPL27Q9P0M9 148 aaKnown RBP12.71□□□□□ -0.37
LMNA-201ENST00000347559 TRAV8-6A0A0B4J262 113 aa12.71□□□□□ -0.38
LMNA-201ENST00000347559 C2orf70A6NJV1 201 aa12.71□□□□□ -0.38
LMNA-201ENST00000347559 AHRRA9YTQ3 701 aa12.71□□□□□ -0.38
LMNA-201ENST00000347559 IGLV3-19P01714 112 aa12.71□□□□□ -0.38
LMNA-201ENST00000347559 GRPP07492 148 aa12.71□□□□□ -0.38
LMNA-201ENST00000347559 SARAFQ96BY9 339 aa12.71□□□□□ -0.38
LMNA-201ENST00000347559 TMEM70Q9BUB7 260 aa12.71□□□□□ -0.38
LMNA-201ENST00000347559 PSPNO60542 156 aa12.7□□□□□ -0.38
LMNA-201ENST00000347559 B3GALT5-AS1P59052 145 aa12.7□□□□□ -0.38
LMNA-201ENST00000347559 SLC25A34Q6PIV7 304 aa12.7□□□□□ -0.38
LMNA-201ENST00000347559 HINT2Q9BX68 163 aa12.7□□□□□ -0.38
LMNA-201ENST00000347559 MBNL3Q9NUK0 354 aaKnown RBP12.7□□□□□ -0.38
LMNA-201ENST00000347559 COL6A3P12111 3177 aa12.7□□□□□ -0.38
LMNA-201ENST00000347559 A0A087X0K7 114 aa12.7□□□□□ -0.38
LMNA-201ENST00000347559 SNAI2O43623 268 aa12.7□□□□□ -0.38
LMNA-201ENST00000347559 LINC00173Q6ZV60 143 aa12.7□□□□□ -0.38
LMNA-201ENST00000347559 RPS19BP1Q86WX3 136 aaKnown RBP12.7□□□□□ -0.38
LMNA-201ENST00000347559 ZBTB34Q8NCN2 500 aa12.7□□□□□ -0.38
LMNA-201ENST00000347559 TRAV3A0A0B4J244 114 aa12.69□□□□□ -0.38
LMNA-201ENST00000347559 IZUMO1RA6ND01 250 aa12.69□□□□□ -0.38
LMNA-201ENST00000347559 NXPH1P58417 271 aa12.69□□□□□ -0.38
LMNA-201ENST00000347559 CXorf67Q86X51 503 aaPredicted RBP12.69□□□□□ -0.38
LMNA-201ENST00000347559 DEFB125Q8N687 156 aa12.69□□□□□ -0.38
LMNA-201ENST00000347559 SMIM12Q96EX1 92 aa12.69□□□□□ -0.38
LMNA-201ENST00000347559 LINC00479Q96M42 142 aa12.69□□□□□ -0.38
LMNA-201ENST00000347559 NPVFQ9HCQ7 196 aa12.69□□□□□ -0.38
LMNA-201ENST00000347559 SH2D2AQ9NP31 389 aa12.69□□□□□ -0.38
LMNA-201ENST00000347559 MPC1Q9Y5U8 109 aa12.69□□□□□ -0.38
LMNA-201ENST00000347559 IGFBP2P18065 325 aa12.69□□□□□ -0.38
LMNA-201ENST00000347559 CD24P25063 80 aa12.69□□□□□ -0.38
LMNA-201ENST00000347559 FOXA3P55318 350 aaPredicted RBP12.69□□□□□ -0.38
LMNA-201ENST00000347559 PLP2Q04941 152 aa12.69□□□□□ -0.38
LMNA-201ENST00000347559 GABRA6Q16445 453 aa12.69□□□□□ -0.38
LMNA-201ENST00000347559 SMIM27A0A1W2PRY6 76 aa12.68□□□□□ -0.38
LMNA-201ENST00000347559 GDF5OSQ5U4N7 250 aa12.68□□□□□ -0.38
LMNA-201ENST00000347559 TRAT1Q6PIZ9 186 aa12.68□□□□□ -0.38
LMNA-201ENST00000347559 TEPPQ6URK8 271 aa12.68□□□□□ -0.38
LMNA-201ENST00000347559 ISLRO14498 428 aa12.68□□□□□ -0.38
LMNA-201ENST00000347559 C1orf185Q5T7R7 199 aa12.68□□□□□ -0.38
LMNA-201ENST00000347559 WDR86Q86TI4 376 aa12.68□□□□□ -0.38
LMNA-201ENST00000347559 PMCHL2Q9BQD1 86 aa12.68□□□□□ -0.38
LMNA-201ENST00000347559 NCOR1P1Q9H4R4 102 aa12.68□□□□□ -0.38
LMNA-201ENST00000347559 ZNF430Q9H8G1 570 aaPredicted RBP12.68□□□□□ -0.38
LMNA-201ENST00000347559 SAP30LQ9HAJ7 183 aa12.68□□□□□ -0.38
LMNA-201ENST00000347559 FREM2Q5SZK8 3169 aa12.68□□□□□ -0.38
LMNA-201ENST00000347559 HCFC1P51610 2035 aa12.68□□□□□ -0.38
LMNA-201ENST00000347559 TMEM30CPA0ZSE6 113 aa12.68□□□□□ -0.38
LMNA-201ENST00000347559 HSBP1L1C9JCN9 74 aa12.68□□□□□ -0.38
LMNA-201ENST00000347559 DNPH1O43598 174 aa12.68□□□□□ -0.38
LMNA-201ENST00000347559 OR52E5Q8NH55 327 aa12.68□□□□□ -0.38
LMNA-201ENST00000347559 C1orf159Q96HA4 380 aa12.68□□□□□ -0.38
LMNA-201ENST00000347559 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.67□□□□□ -0.38
LMNA-201ENST00000347559 P04436 131 aa12.67□□□□□ -0.38
LMNA-201ENST00000347559 RAB31Q13636 194 aa12.67□□□□□ -0.38
LMNA-201ENST00000347559 TUSC5Q8IXB3 177 aa12.67□□□□□ -0.38
LMNA-201ENST00000347559 PKIBQ9C010 78 aa12.67□□□□□ -0.38
LMNA-201ENST00000347559 CIDEAO60543 219 aa12.67□□□□□ -0.38
LMNA-201ENST00000347559 GFRA3O60609 400 aa12.67□□□□□ -0.38
LMNA-201ENST00000347559 CER1O95813 267 aa12.67□□□□□ -0.38
LMNA-201ENST00000347559 AREGP15514 252 aa12.67□□□□□ -0.38
LMNA-201ENST00000347559 GDF1P27539 372 aa12.67□□□□□ -0.38
LMNA-201ENST00000347559 C12orf54Q6X4T0 127 aa12.67□□□□□ -0.38
LMNA-201ENST00000347559 NAA38Q9BRA0 125 aaKnown RBP12.67□□□□□ -0.38
LMNA-201ENST00000347559 WDR54Q9H977 334 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms