RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 RARRES2Q99969 163 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 LPAR2Q9HBW0 351 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 PITPNC1Q9UKF7 332 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 TMEM56-RWDD3S4R434 201 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 RAB29O14966 203 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 SLC25A16P16260 332 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 PRTN3P24158 256 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 NKX2-1P43699 371 aaPredicted RBP11.93□□□□□ -0.5
CXCL12-201ENST00000343575 ICAM4Q14773 271 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 LDLRAD2Q5SZI1 272 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 AKR1C8PQ5T2L2 129 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 C1orf122Q6ZSJ8 110 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 OR9G1Q8NH87 305 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 CTDSP1Q9GZU7 261 aa11.93□□□□□ -0.5
CXCL12-201ENST00000343575 LYRM2Q9NU23 88 aaPredicted RBP11.93□□□□□ -0.5
CXCL12-201ENST00000343575 RAMP3O60896 148 aa11.92□□□□□ -0.5
CXCL12-201ENST00000343575 FOXH1O75593 365 aa11.92□□□□□ -0.5
CXCL12-201ENST00000343575 USF1P22415 310 aaPredicted RBP11.92□□□□□ -0.5
CXCL12-201ENST00000343575 VAMP2P63027 116 aa11.92□□□□□ -0.5
CXCL12-201ENST00000343575 Q5PR19 223 aa11.92□□□□□ -0.5
CXCL12-201ENST00000343575 ZNF66Q6ZN08 573 aa11.92□□□□□ -0.5
CXCL12-201ENST00000343575 SELENOHQ8IZQ5 122 aaKnown RBP11.92□□□□□ -0.5
CXCL12-201ENST00000343575 KIR3DL3Q8N743 410 aa11.92□□□□□ -0.5
CXCL12-201ENST00000343575 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.92□□□□□ -0.5
CXCL12-201ENST00000343575 DDB2Q92466 427 aa11.92□□□□□ -0.5
CXCL12-201ENST00000343575 FAM210BQ96KR6 192 aa11.92□□□□□ -0.5
CXCL12-201ENST00000343575 NOL4LQ96MY1 436 aaPredicted RBP11.92□□□□□ -0.5
CXCL12-201ENST00000343575 C2orf88Q9BSF0 95 aa11.92□□□□□ -0.5
CXCL12-201ENST00000343575 TRBV24-1A0A075B6N3 115 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 SMCO3A2RU48 225 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 CLDN34H7C241 214 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 M0R1X1 148 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 CYB5BO43169 146 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 OPN1MWP04001 364 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 CXCL1P09341 107 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 OPN1MW2P0DN77 364 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 OPN1MW3P0DN78 364 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 ZNF137PP52743 207 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 CLEC9AQ6UXN8 241 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 ZNF833PQ6ZTB9 187 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 RNASEH2CQ8TDP1 164 aaKnown RBP11.91□□□□□ -0.5
CXCL12-201ENST00000343575 RAB24Q969Q5 203 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 HSD17B10Q99714 261 aaKnown RBP11.91□□□□□ -0.5
CXCL12-201ENST00000343575 DFFBO76075 338 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 CT45A6P0DMU7 189 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 CT45A5P0DMU8 189 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 CT45A7P0DMV0 189 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 ZNF16P17020 682 aaPredicted RBP11.91□□□□□ -0.5
CXCL12-201ENST00000343575 COX7A1P24310 79 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 S100GP29377 79 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 KLRD1Q13241 179 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 HLA-DRB5Q30154 266 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 SPNS3Q6ZMD2 512 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 VMO1Q7Z5L0 202 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 PNKDQ8N490 385 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 SLC35G3Q8N808 338 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 OR4P4Q8NGL7 312 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 C1orf159Q96HA4 380 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 TBX15Q96SF7 602 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 CLEC7AQ9BXN2 247 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 INSIG2Q9Y5U4 225 aa11.91□□□□□ -0.5
CXCL12-201ENST00000343575 ZNF727A8MUV8 499 aa11.9□□□□□ -0.5
CXCL12-201ENST00000343575 FGF7P21781 194 aa11.9□□□□□ -0.5
CXCL12-201ENST00000343575 RPL23AP62750 156 aaKnown RBP11.9□□□□□ -0.5
CXCL12-201ENST00000343575 CCL20P78556 96 aa11.9□□□□□ -0.5
CXCL12-201ENST00000343575 PRSS57Q6UWY2 283 aa11.9□□□□□ -0.5
CXCL12-201ENST00000343575 TMEM252Q8N6L7 170 aa11.9□□□□□ -0.5
CXCL12-201ENST00000343575 CYB561D1Q8N8Q1 229 aa11.9□□□□□ -0.5
CXCL12-201ENST00000343575 BEND2Q8NDZ0 799 aa11.9□□□□□ -0.5
CXCL12-201ENST00000343575 OR11H6Q8NGC7 330 aa11.9□□□□□ -0.5
CXCL12-201ENST00000343575 P2RX4Q99571 388 aa11.9□□□□□ -0.5
CXCL12-201ENST00000343575 GPR61Q9BZJ8 451 aa11.9□□□□□ -0.5
CXCL12-201ENST00000343575 LIN7CQ9NUP9 197 aaKnown RBP11.9□□□□□ -0.5
CXCL12-201ENST00000343575 CR1P17927 2039 aa11.9□□□□□ -0.5
CXCL12-201ENST00000343575 A0A0G2JRQ6 117 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 LOC102723971A0A1B0GUV8 181 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 IGSF23A1L1A6 192 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 TRGC2P03986 189 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 PAX8Q06710 450 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 MAPK1IP1LQ8NDC0 245 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 IL22RA2Q969J5 263 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 CCDC168Q8NDH2 2452 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.89□□□□□ -0.51
CXCL12-201ENST00000343575 TGIF2-C20orf24A0A0A6YYL0 155 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 FAM24AA6NFZ4 105 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 RNF212BA8MTL3 300 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 ODF3BA8MYP8 253 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 LY6LH3BQJ8 138 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 TRGC1P0CF51 173 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 RD3LP0DJH9 198 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 HOXB4P17483 251 aaPredicted RBP11.89□□□□□ -0.51
CXCL12-201ENST00000343575 TAS2R30P59541 319 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 GAMTQ14353 236 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 SSX2Q16385 188 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 HAGHQ16775 308 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 OR10X1Q8NGY0 326 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 PACRGQ96M98 296 aaPredicted RBP11.89□□□□□ -0.51
CXCL12-201ENST00000343575 ATP5SQ99766 215 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 SSX3Q99909 188 aa11.89□□□□□ -0.51
CXCL12-201ENST00000343575 RNF223E7ERA6 249 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms