RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 TTC9CQ8N5M4 171 aa9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 SLC35G3Q8N808 338 aa9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 FAM110DQ8TAY7 271 aaPredicted RBP9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 GPR146Q96CH1 333 aa9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 CITED2Q99967 270 aaPredicted RBP9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 GPN1Q9HCN4 374 aaPredicted RBP9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 PRR13Q9NZ81 148 aa9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 TMED3Q9Y3Q3 217 aa9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 TSSC4Q9Y5U2 329 aaPredicted RBP9.33□□□□□ -0.92
SPTLC1-202ENST00000337841 A0A1B0GU03 582 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 TEX22C9J3V5 150 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 E7EUB6 86 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 INMT-MINDY4F8WBC2 141 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 H3BUA1 57 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 CYB5BO43169 146 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 DHFRP00374 187 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 IFNA21P01568 189 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 IFNA17P01571 189 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 IL5P05113 134 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 APELAP0DMC3 54 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 SULT1A3P0DMM9 295 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 SULT1A4P0DMN0 295 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 RAB9AP51151 201 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 MECP2P51608 486 aaKnown RBP9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 IZUMO4Q1ZYL8 232 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 TCTEX1D4Q5JR98 221 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 KHDC1LQ5JSQ8 128 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 NDUFA11Q86Y39 141 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 RNF152Q8N8N0 203 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 SLA2Q9H6Q3 261 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 NDUFA4L2Q9NRX3 87 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 COA4Q9NYJ1 87 aa9.32□□□□□ -0.92
SPTLC1-202ENST00000337841 A0A0G2JRQ6 117 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 NPIPB5A8MRT5 1133 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 PRAF2O60831 178 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 BRI3O95415 125 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 HOXB5P09067 269 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 OR13C7P0DN81 318 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 DEFA4P12838 97 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 PSMB8P28062 276 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 PSMB6P28072 239 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 ERHP84090 104 aaKnown RBP9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 SMCO1Q147U7 214 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 NSUN5P1Q3KNT7 163 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 ASPHD1Q5U4P2 390 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 Q6ZRM9 215 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 ZNF431Q8TF32 576 aaPredicted RBP9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 MITD1Q8WV92 249 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 MS4A10Q96PG2 267 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 KLK15Q9H2R5 256 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 ENY2Q9NPA8 101 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 CACNG5Q9UF02 275 aa9.31□□□□□ -0.92
SPTLC1-202ENST00000337841 A0A0G2JLM5 398 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 CGB1A6NKQ9 187 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 DBX1A6NMT0 343 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 M0QZ24 198 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 ST8SIA3O43173 380 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 SOX15O60248 233 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 PTTG1O95997 202 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 TRGV3P03979 118 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 RPLP1P05386 114 aaKnown RBP9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 CRYGCP07315 174 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 SLC25A6P12236 298 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 AREGP15514 252 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 HIST1H1BP16401 226 aaKnown RBP9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 CDX1P47902 265 aaPredicted RBP9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 SPCS3P61009 180 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 RPL23AP62750 156 aaKnown RBP9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 PRCDQ00LT1 54 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 NMSQ5H8A3 153 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 C12orf45Q8N5I9 185 aaPredicted RBP9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 UXS1Q8NBZ7 420 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 OR10W1Q8NGF6 305 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 OR1L6Q8NGR2 347 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 OR52E5Q8NH55 327 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 OR1S1Q8NH92 325 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 UBE2E2Q96LR5 201 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 MARVELD1Q9BSK0 173 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 PLEKHA3Q9HB20 300 aa9.3□□□□□ -0.92
SPTLC1-202ENST00000337841 C13orf42A0A1B0GVH6 325 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 A0A1B0GW64 132 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 A0A1W2PRX2 142 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 IGLC7A0M8Q6 106 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 NUDT19A8MXV4 375 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 CTRB1P17538 263 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 SNCAP37840 140 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 TPPP2P59282 170 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 LINC01559Q495D7 138 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 AARDQ4LEZ3 155 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 GGNBP1Q5YKI7 109 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 CTRB2Q6GPI1 263 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 LCNL1Q6ZST4 164 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 ZNF491Q8N8L2 437 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 OR52B4Q8NGK2 314 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 USMG5Q96IX5 58 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 SEC22CQ9BRL7 303 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 THYN1Q9P016 225 aa9.29□□□□□ -0.92
SPTLC1-202ENST00000337841 CEBPZOSA8MTT3 80 aa9.28□□□□□ -0.92
SPTLC1-202ENST00000337841 SNRPGP15A8MWD9 76 aa9.28□□□□□ -0.92
SPTLC1-202ENST00000337841 REG1AP05451 166 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms