RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 TFF1P04155 84 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 GCHFRP30047 84 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 BRWD1-AS2P59051 145 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 HOXA4Q00056 320 aaPredicted RBP11.42□□□□□ -0.58
SYNE3-201ENST00000334258 Q0VG73 95 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 MRPL54Q6P161 138 aaKnown RBP11.42□□□□□ -0.58
SYNE3-201ENST00000334258 ABHD12Q8N2K0 398 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 OR4P4Q8NGL7 312 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 BORCS7Q96B45 105 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 ZNF703Q9H7S9 590 aaPredicted RBP11.42□□□□□ -0.58
SYNE3-201ENST00000334258 LINC00473A8K010 186 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 MT-CO2P00403 227 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 CYC1P08574 325 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 CELA3AP09093 270 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 P0C879 139 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 ESDP10768 282 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 OPRK1P41145 380 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 LINC00696Q6ZRV3 163 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 DOLPP1Q86YN1 238 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 VKORC1L1Q8N0U8 176 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 Q8N7P7 452 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 SLC45A2Q9UMX9 530 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 ADAMTS20P59510 1910 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 HYPMO75409 117 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 GNG4P50150 75 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 SPATA31B1PQ5VZV4 182 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 WDR86Q86TI4 376 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 EAF1Q96JC9 268 aaPredicted RBP11.41□□□□□ -0.58
SYNE3-201ENST00000334258 MGST2Q99735 147 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 HES7Q9BYE0 225 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 PRR14LQ5THK1 2151 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 DPRXA6NFQ7 191 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 MPDU1O75352 247 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 OR9G9P0C7N8 305 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 SRIP30626 198 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 SSTR5P35346 364 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 Q0VFX4 171 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 SRSF6Q13247 344 aaKnown RBP11.41□□□□□ -0.58
SYNE3-201ENST00000334258 KLHDC1Q8N7A1 406 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 GGTLC1Q9BX51 225 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 LINC00470Q9BZP3 86 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 CLEC5AQ9NY25 188 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 TRAV9-1A0A075B6T8 112 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 SPAARA0A1B0GVQ0 90 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 WNT9BO14905 357 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 IGHV3-13P01766 116 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 IGHV3-7P01780 117 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 CD59P13987 128 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 C3AR1Q16581 482 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 CT55Q8WUE5 264 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 RCHY1Q96PM5 261 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 RNASE7Q9H1E1 156 aaKnown RBP11.41□□□□□ -0.58
SYNE3-201ENST00000334258 BOKQ9UMX3 212 aaPredicted RBP11.41□□□□□ -0.58
SYNE3-201ENST00000334258 COL12A1Q99715 3063 aa11.41□□□□□ -0.58
SYNE3-201ENST00000334258 FOXH1O75593 365 aa11.4□□□□□ -0.58
SYNE3-201ENST00000334258 MGST1P10620 155 aaKnown RBP11.4□□□□□ -0.58
SYNE3-201ENST00000334258 GFRA1P56159 465 aa11.4□□□□□ -0.58
SYNE3-201ENST00000334258 PQLC2Q6ZP29 291 aa11.4□□□□□ -0.58
SYNE3-201ENST00000334258 ZNF826PQ6ZT77 177 aa11.4□□□□□ -0.58
SYNE3-201ENST00000334258 OR2M7Q8NG81 312 aa11.4□□□□□ -0.58
SYNE3-201ENST00000334258 HINT2Q9BX68 163 aa11.4□□□□□ -0.58
SYNE3-201ENST00000334258 OBP2BQ9NPH6 170 aa11.4□□□□□ -0.58
SYNE3-201ENST00000334258 CHD8Q9HCK8 2581 aa11.4□□□□□ -0.58
SYNE3-201ENST00000334258 HELTA6NFD8 242 aa11.4□□□□□ -0.58
SYNE3-201ENST00000334258 OOEPA6NGQ2 149 aa11.4□□□□□ -0.58
SYNE3-201ENST00000334258 C9orf172C9J069 976 aa11.4□□□□□ -0.58
SYNE3-201ENST00000334258 IGLC2P0DOY2 106 aa11.4□□□□□ -0.58
SYNE3-201ENST00000334258 IGLC3P0DOY3 106 aa11.4□□□□□ -0.58
SYNE3-201ENST00000334258 RHOBP62745 196 aa11.4□□□□□ -0.58
SYNE3-201ENST00000334258 TCTEX1D1Q8N7M0 179 aa11.4□□□□□ -0.58
SYNE3-201ENST00000334258 GNB1LQ9BYB4 327 aa11.4□□□□□ -0.58
SYNE3-201ENST00000334258 IGF2RP11717 2491 aa11.4□□□□□ -0.59
SYNE3-201ENST00000334258 A0A1W2PS18 150 aa11.4□□□□□ -0.59
SYNE3-201ENST00000334258 NDUFS8O00217 210 aa11.4□□□□□ -0.59
SYNE3-201ENST00000334258 CGAP01215 116 aa11.4□□□□□ -0.59
SYNE3-201ENST00000334258 CRYBB3P26998 211 aa11.4□□□□□ -0.59
SYNE3-201ENST00000334258 TMEM249Q2WGJ8 235 aa11.4□□□□□ -0.59
SYNE3-201ENST00000334258 ALKBH6Q3KRA9 238 aa11.4□□□□□ -0.59
SYNE3-201ENST00000334258 TIGITQ495A1 244 aa11.4□□□□□ -0.59
SYNE3-201ENST00000334258 OCIAD2Q56VL3 154 aa11.4□□□□□ -0.59
SYNE3-201ENST00000334258 CENPWQ5EE01 88 aa11.4□□□□□ -0.59
SYNE3-201ENST00000334258 WDR73Q6P4I2 378 aa11.4□□□□□ -0.59
SYNE3-201ENST00000334258 IGKV3D-15A0A087WSY6 115 aa11.39□□□□□ -0.59
SYNE3-201ENST00000334258 C3orf79P0CE67 100 aa11.39□□□□□ -0.59
SYNE3-201ENST00000334258 ZNF83P51522 516 aa11.39□□□□□ -0.59
SYNE3-201ENST00000334258 ERVK-16P61578 105 aa11.39□□□□□ -0.59
SYNE3-201ENST00000334258 EDDM3AQ14507 147 aa11.39□□□□□ -0.59
SYNE3-201ENST00000334258 OR1C1Q15619 314 aa11.39□□□□□ -0.59
SYNE3-201ENST00000334258 LCN12Q6JVE5 192 aa11.39□□□□□ -0.59
SYNE3-201ENST00000334258 MDP1Q86V88 176 aa11.39□□□□□ -0.59
SYNE3-201ENST00000334258 KCNS1Q96KK3 526 aa11.39□□□□□ -0.59
SYNE3-201ENST00000334258 SS18L1O75177 396 aaPredicted RBP11.39□□□□□ -0.59
SYNE3-201ENST00000334258 GPR12P47775 334 aa11.39□□□□□ -0.59
SYNE3-201ENST00000334258 RAB31Q13636 194 aa11.39□□□□□ -0.59
SYNE3-201ENST00000334258 ZNF146Q15072 292 aa11.39□□□□□ -0.59
SYNE3-201ENST00000334258 FBLN7Q53RD9 439 aa11.39□□□□□ -0.59
SYNE3-201ENST00000334258 HES3Q5TGS1 186 aa11.39□□□□□ -0.59
SYNE3-201ENST00000334258 DEFB124Q8NES8 71 aa11.39□□□□□ -0.59
SYNE3-201ENST00000334258 BCL2L2Q92843 193 aaPredicted RBP11.39□□□□□ -0.59
SYNE3-201ENST00000334258 HSD17B10Q99714 261 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms