RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 SPTBN2O15020 2390 aa14.31□□□□□ -0.12
PTP4A3-201ENST00000329397 TMPRSS2O15393 492 aa14.31□□□□□ -0.12
PTP4A3-201ENST00000329397 IL6RP08887 468 aaPredicted RBP14.31□□□□□ -0.12
PTP4A3-201ENST00000329397 WT1P19544 449 aaPredicted RBP14.31□□□□□ -0.12
PTP4A3-201ENST00000329397 KITLGP21583 273 aa14.31□□□□□ -0.12
PTP4A3-201ENST00000329397 GATA2P23769 480 aaPredicted RBP14.31□□□□□ -0.12
PTP4A3-201ENST00000329397 TIMP3P35625 211 aa14.31□□□□□ -0.12
PTP4A3-201ENST00000329397 HTD2P86397 168 aa14.31□□□□□ -0.12
PTP4A3-201ENST00000329397 OR5I1Q13606 314 aa14.31□□□□□ -0.12
PTP4A3-201ENST00000329397 FAM90A1Q86YD7 464 aa14.31□□□□□ -0.12
PTP4A3-201ENST00000329397 DEFB108BQ8NET1 73 aa14.31□□□□□ -0.12
PTP4A3-201ENST00000329397 NUDT10Q8NFP7 164 aa14.31□□□□□ -0.12
PTP4A3-201ENST00000329397 OR2V2Q96R30 315 aa14.31□□□□□ -0.12
PTP4A3-201ENST00000329397 F2Z2F3 143 aa14.31□□□□□ -0.12
PTP4A3-201ENST00000329397 OPRK1P41145 380 aa14.31□□□□□ -0.12
PTP4A3-201ENST00000329397 STPG3Q8N7X2 389 aa14.31□□□□□ -0.12
PTP4A3-201ENST00000329397 GCGP01275 180 aa14.3□□□□□ -0.12
PTP4A3-201ENST00000329397 IGFBP2P18065 325 aa14.3□□□□□ -0.12
PTP4A3-201ENST00000329397 NDUFAF3Q9BU61 184 aa14.3□□□□□ -0.12
PTP4A3-201ENST00000329397 GUSBP1Q15486 140 aa14.3□□□□□ -0.12
PTP4A3-201ENST00000329397 EFNB3Q15768 340 aa14.3□□□□□ -0.12
PTP4A3-201ENST00000329397 TCTEX1D1Q8N7M0 179 aa14.3□□□□□ -0.12
PTP4A3-201ENST00000329397 OR4P4Q8NGL7 312 aa14.3□□□□□ -0.12
PTP4A3-201ENST00000329397 RAB1CQ92928 201 aa14.3□□□□□ -0.12
PTP4A3-201ENST00000329397 SNRNP40Q96DI7 357 aaKnown RBP14.3□□□□□ -0.12
PTP4A3-201ENST00000329397 FKBP11Q9NYL4 201 aa14.3□□□□□ -0.12
PTP4A3-201ENST00000329397 ABCA1O95477 2261 aa14.3□□□□□ -0.12
PTP4A3-201ENST00000329397 SAA2-SAA4A0A096LPE2 208 aa14.29□□□□□ -0.12
PTP4A3-201ENST00000329397 CGAP01215 116 aa14.29□□□□□ -0.12
PTP4A3-201ENST00000329397 SAA2P0DJI9 122 aaPredicted RBP14.29□□□□□ -0.12
PTP4A3-201ENST00000329397 SLC35B1P78383 322 aa14.29□□□□□ -0.12
PTP4A3-201ENST00000329397 LCN2P80188 198 aa14.29□□□□□ -0.12
PTP4A3-201ENST00000329397 FAM216AQ8WUB2 273 aa14.29□□□□□ -0.12
PTP4A3-201ENST00000329397 SRRM5B3KS81 715 aa14.29□□□□□ -0.12
PTP4A3-201ENST00000329397 CXorf1O96002 111 aa14.29□□□□□ -0.12
PTP4A3-201ENST00000329397 GCHFRP30047 84 aa14.29□□□□□ -0.12
PTP4A3-201ENST00000329397 TRIP6Q15654 476 aaKnown RBP14.29□□□□□ -0.12
PTP4A3-201ENST00000329397 TMEM108Q6UXF1 575 aa14.29□□□□□ -0.12
PTP4A3-201ENST00000329397 CALYQ9NYX4 217 aa14.29□□□□□ -0.12
PTP4A3-201ENST00000329397 A6NNC1 897 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 VSTM5A8MXK1 200 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 CA2P00918 260 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 ZNF90Q03938 601 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 TDRG1Q3Y452 100 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 CT45A1Q5HYN5 189 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 OR4A47Q6IF82 309 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 MIR17HGQ75NE6 70 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 LYG1Q8N1E2 194 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 OR10G8Q8NGN5 311 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 CT45A3Q8NHU0 189 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 JPT1Q9UK76 154 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 TP53TG3Q9ULZ0 132 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 POLR3KQ9Y2Y1 108 aaPredicted RBP14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 TANC2Q9HCD6 1990 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 C22orf46C9J442 243 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 MLANAQ16655 118 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 LHFPL4Q7Z7J7 247 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 RPRMLQ8N4K4 120 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 MS4A10Q96PG2 267 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 TPRP12270 2363 aaKnown RBP14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 POLEQ07864 2286 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 RAI1Q7Z5J4 1906 aaPredicted RBP14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 ZNF705FA8MVS1 300 aaPredicted RBP14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 M0R1B8 84 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 TCF21O43680 179 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 ZNF705DP0CH99 300 aaPredicted RBP14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 ZNF705BP0CI00 300 aaPredicted RBP14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 NPY1RP25929 384 aa14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 GSX1Q9H4S2 264 aaPredicted RBP14.28□□□□□ -0.12
PTP4A3-201ENST00000329397 ZNF891A8MT65 544 aaPredicted RBP14.27□□□□□ -0.12
PTP4A3-201ENST00000329397 MGST3O14880 152 aa14.27□□□□□ -0.12
PTP4A3-201ENST00000329397 IQCJQ1A5X6 159 aa14.27□□□□□ -0.12
PTP4A3-201ENST00000329397 ITLN1Q8WWA0 313 aa14.27□□□□□ -0.12
PTP4A3-201ENST00000329397 LSM4Q9Y4Z0 139 aaKnown RBP14.27□□□□□ -0.12
PTP4A3-201ENST00000329397 YPEL1O60688 119 aa14.27□□□□□ -0.13
PTP4A3-201ENST00000329397 TNFSF13O75888 250 aa14.27□□□□□ -0.13
PTP4A3-201ENST00000329397 MMP23AO75900 390 aa14.27□□□□□ -0.13
PTP4A3-201ENST00000329397 IGHG3P01860 377 aa14.27□□□□□ -0.13
PTP4A3-201ENST00000329397 CEACAM8P31997 349 aaPredicted RBP14.27□□□□□ -0.13
PTP4A3-201ENST00000329397 LINC00310P59036 64 aa14.27□□□□□ -0.13
PTP4A3-201ENST00000329397 FOXL1Q12952 345 aa14.27□□□□□ -0.13
PTP4A3-201ENST00000329397 NOL4LQ96MY1 436 aaPredicted RBP14.27□□□□□ -0.13
PTP4A3-201ENST00000329397 YPEL2Q96QA6 119 aa14.27□□□□□ -0.13
PTP4A3-201ENST00000329397 LRFN3Q9BTN0 628 aa14.27□□□□□ -0.13
PTP4A3-201ENST00000329397 SNHG12Q9BXW3 62 aa14.27□□□□□ -0.13
PTP4A3-201ENST00000329397 NPVFQ9HCQ7 196 aa14.27□□□□□ -0.13
PTP4A3-201ENST00000329397 PIEZO2Q9H5I5 2752 aa14.26□□□□□ -0.13
PTP4A3-201ENST00000329397 MPDU1O75352 247 aa14.26□□□□□ -0.13
PTP4A3-201ENST00000329397 KRTCAP3Q53RY4 240 aa14.26□□□□□ -0.13
PTP4A3-201ENST00000329397 TEPPQ6URK8 271 aa14.26□□□□□ -0.13
PTP4A3-201ENST00000329397 C15orf61A6NNL5 157 aa14.26□□□□□ -0.13
PTP4A3-201ENST00000329397 IGLV1-44P01699 117 aa14.26□□□□□ -0.13
PTP4A3-201ENST00000329397 CD99P14209 185 aa14.26□□□□□ -0.13
PTP4A3-201ENST00000329397 IER3P46695 156 aa14.26□□□□□ -0.13
PTP4A3-201ENST00000329397 C17orf58Q2M2W7 97 aa14.26□□□□□ -0.13
PTP4A3-201ENST00000329397 PLA2G2CQ5R387 149 aa14.26□□□□□ -0.13
PTP4A3-201ENST00000329397 DOLPP1Q86YN1 238 aa14.26□□□□□ -0.13
PTP4A3-201ENST00000329397 DDB2Q92466 427 aa14.26□□□□□ -0.13
PTP4A3-201ENST00000329397 STARD4Q96DR4 205 aa14.26□□□□□ -0.13
PTP4A3-201ENST00000329397 ZNF71Q9NQZ8 489 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms