RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 C16orf95Q9H693 158 aa21.35■■□□□ 1.01
HDAC3-201ENST00000305264 A0A1B0GVG6 124 aa21.34■■□□□ 1.01
HDAC3-201ENST00000305264 PRCDQ00LT1 54 aa21.34■■□□□ 1.01
HDAC3-201ENST00000305264 LINC01006Q8NI28 216 aa21.34■■□□□ 1.01
HDAC3-201ENST00000305264 HSPB7Q9UBY9 170 aa21.34■■□□□ 1.01
HDAC3-201ENST00000305264 hCG_2014768A0A024R1R8 64 aa21.34■■□□□ 1.01
HDAC3-201ENST00000305264 TRAPPC2P0DI81 140 aa21.34■■□□□ 1.01
HDAC3-201ENST00000305264 TRAPPC2BP0DI82 140 aa21.34■■□□□ 1.01
HDAC3-201ENST00000305264 CRIP2P52943 208 aaPredicted RBP21.34■■□□□ 1.01
HDAC3-201ENST00000305264 TNFRSF9Q07011 255 aa21.34■■□□□ 1.01
HDAC3-201ENST00000305264 STPG2Q8N412 459 aa21.34■■□□□ 1.01
HDAC3-201ENST00000305264 OR52E5Q8NH55 327 aa21.34■■□□□ 1.01
HDAC3-201ENST00000305264 WDR89Q96FK6 387 aaPredicted RBP21.34■■□□□ 1.01
HDAC3-201ENST00000305264 C2orf50Q96LR7 162 aa21.34■■□□□ 1.01
HDAC3-201ENST00000305264 HKR1P10072 659 aa21.33■■□□□ 1.01
HDAC3-201ENST00000305264 SPCS3P61009 180 aa21.33■■□□□ 1.01
HDAC3-201ENST00000305264 IGLC7A0M8Q6 106 aa21.32■■□□□ 1
HDAC3-201ENST00000305264 AREGP15514 252 aa21.32■■□□□ 1
HDAC3-201ENST00000305264 KRTAP24-1Q3LI83 254 aa21.32■■□□□ 1
HDAC3-201ENST00000305264 PDLIM3Q53GG5 364 aaPredicted RBP21.32■■□□□ 1
HDAC3-201ENST00000305264 C11orf87Q6NUJ2 197 aa21.32■■□□□ 1
HDAC3-201ENST00000305264 FBN1P35555 2871 aaKnown RBP21.32■■□□□ 1
HDAC3-201ENST00000305264 TRAV41A0A0B4J266 112 aa21.32■■□□□ 1
HDAC3-201ENST00000305264 C19orf54Q5BKX5 351 aa21.32■■□□□ 1
HDAC3-201ENST00000305264 UNQ5815/PRO19632Q6UWF5 114 aa21.32■■□□□ 1
HDAC3-201ENST00000305264 OR4F5Q8NH21 305 aa21.32■■□□□ 1
HDAC3-201ENST00000305264 MAGT1Q9H0U3 335 aa21.32■■□□□ 1
HDAC3-201ENST00000305264 SCGB1D2O95969 90 aa21.31■■□□□ 1
HDAC3-201ENST00000305264 MDKP21741 143 aaPredicted RBP21.31■■□□□ 1
HDAC3-201ENST00000305264 WT1-ASQ06250 92 aa21.31■■□□□ 1
HDAC3-201ENST00000305264 PLEKHA3Q9HB20 300 aa21.31■■□□□ 1
HDAC3-201ENST00000305264 ZNF580Q9UK33 172 aa21.31■■□□□ 1
HDAC3-201ENST00000305264 REG1AP05451 166 aa21.3■■□□□ 1
HDAC3-201ENST00000305264 RBKSQ9H477 322 aa21.3■■□□□ 1
HDAC3-201ENST00000305264 FAM90A26D6RGX4 464 aa21.3■■□□□ 1
HDAC3-201ENST00000305264 NKX2-1P43699 371 aaPredicted RBP21.3■■□□□ 1
HDAC3-201ENST00000305264 HOXA1P49639 335 aaPredicted RBP21.3■■□□□ 1
HDAC3-201ENST00000305264 ID3Q02535 119 aa21.3■■□□□ 1
HDAC3-201ENST00000305264 AKIRIN2Q53H80 203 aa21.3■■□□□ 1
HDAC3-201ENST00000305264 C19orf35Q6ZS72 473 aa21.3■■□□□ 1
HDAC3-201ENST00000305264 CEBPZOSA8MTT3 80 aa21.29■■□□□ 1
HDAC3-201ENST00000305264 IL15RAQ13261 267 aa21.29■■□□□ 1
HDAC3-201ENST00000305264 MBPP02686 304 aaPredicted RBP21.28■■□□□ 1
HDAC3-201ENST00000305264 CFHR3Q02985 330 aa21.28■■□□□ 1
HDAC3-201ENST00000305264 C10orf99Q6UWK7 81 aa21.28■■□□□ 1
HDAC3-201ENST00000305264 WNT10AQ9GZT5 417 aa21.28■■□□□ 1
HDAC3-201ENST00000305264 A0A1W2PN81 502 aa21.28■■□□□ 1
HDAC3-201ENST00000305264 OR13C7P0DN81 318 aa21.28■■□□□ 1
HDAC3-201ENST00000305264 CHRNA7P36544 502 aa21.28■■□□□ 1
HDAC3-201ENST00000305264 POLR2GP62487 172 aaKnown RBP eCLIP21.28■■□□□ 1
HDAC3-201ENST00000305264 TMEM267Q0VDI3 215 aaPredicted RBP21.28■■□□□ 1
HDAC3-201ENST00000305264 ZNF329Q86UD4 541 aa21.28■■□□□ 1
HDAC3-201ENST00000305264 SRSF8Q9BRL6 282 aaKnown RBP21.28■■□□□ 1
HDAC3-201ENST00000305264 NMES1Q9C002 83 aa21.28■■□□□ 1
HDAC3-201ENST00000305264 CACFD1Q9UGQ2 172 aa21.28■■□□□ 1
HDAC3-201ENST00000305264 SOX15O60248 233 aa21.27■■□□□ 1
HDAC3-201ENST00000305264 OR5T1Q8NG75 326 aa21.27■■□□□ 1
HDAC3-201ENST00000305264 DTD1Q8TEA8 209 aa21.27■■□□□ 1
HDAC3-201ENST00000305264 PPIFP30405 207 aaKnown RBP21.27■□□□□ 0.99
HDAC3-201ENST00000305264 ZNF436Q9C0F3 470 aaPredicted RBP21.27■□□□□ 0.99
HDAC3-201ENST00000305264 RCL1Q9Y2P8 373 aaKnown RBP21.27■□□□□ 0.99
HDAC3-201ENST00000305264 CLPSL1A2RUU4 121 aa21.26■□□□□ 0.99
HDAC3-201ENST00000305264 SYNGR2O43760 224 aa21.26■□□□□ 0.99
HDAC3-201ENST00000305264 CHAC2Q8WUX2 184 aa21.26■□□□□ 0.99
HDAC3-201ENST00000305264 ENY2Q9NPA8 101 aa21.26■□□□□ 0.99
HDAC3-201ENST00000305264 RNF114Q9Y508 228 aa21.26■□□□□ 0.99
HDAC3-201ENST00000305264 IAPPP10997 89 aa21.25■□□□□ 0.99
HDAC3-201ENST00000305264 PSMB6P28072 239 aa21.25■□□□□ 0.99
HDAC3-201ENST00000305264 SRSF4Q08170 494 aaKnown RBP21.25■□□□□ 0.99
HDAC3-201ENST00000305264 RAB32Q13637 225 aa21.25■□□□□ 0.99
HDAC3-201ENST00000305264 HSD17B13Q7Z5P4 300 aaPredicted RBP21.25■□□□□ 0.99
HDAC3-201ENST00000305264 TTC9CQ8N5M4 171 aa21.25■□□□□ 0.99
HDAC3-201ENST00000305264 KLHDC1Q8N7A1 406 aa21.25■□□□□ 0.99
HDAC3-201ENST00000305264 TMEM68Q96MH6 324 aa21.25■□□□□ 0.99
HDAC3-201ENST00000305264 PSMB11A5LHX3 300 aa21.25■□□□□ 0.99
HDAC3-201ENST00000305264 SSSCA1O60232 199 aa21.25■□□□□ 0.99
HDAC3-201ENST00000305264 CTRB1P17538 263 aa21.25■□□□□ 0.99
HDAC3-201ENST00000305264 S100A10P60903 97 aa21.25■□□□□ 0.99
HDAC3-201ENST00000305264 LRRC37A5PQ49AS3 106 aa21.25■□□□□ 0.99
HDAC3-201ENST00000305264 CTRB2Q6GPI1 263 aa21.25■□□□□ 0.99
HDAC3-201ENST00000305264 OR2C3Q8N628 320 aa21.25■□□□□ 0.99
HDAC3-201ENST00000305264 FAM110DQ8TAY7 271 aaPredicted RBP21.25■□□□□ 0.99
HDAC3-201ENST00000305264 LSM5Q9Y4Y9 91 aaKnown RBP21.25■□□□□ 0.99
HDAC3-201ENST00000305264 NPIPB5A8MRT5 1133 aa21.24■□□□□ 0.99
HDAC3-201ENST00000305264 INS-IGF2F8WCM5 200 aa21.24■□□□□ 0.99
HDAC3-201ENST00000305264 K7EPK0 472 aa21.24■□□□□ 0.99
HDAC3-201ENST00000305264 CYCSP99999 105 aaKnown RBP21.24■□□□□ 0.99
HDAC3-201ENST00000305264 GON7Q9BXV9 100 aa21.24■□□□□ 0.99
HDAC3-201ENST00000305264 HEYLQ9NQ87 328 aaPredicted RBP21.24■□□□□ 0.99
HDAC3-201ENST00000305264 WRBO00258 174 aa21.23■□□□□ 0.99
HDAC3-201ENST00000305264 FBXO24O75426 580 aa21.23■□□□□ 0.99
HDAC3-201ENST00000305264 MED6O75586 246 aa21.23■□□□□ 0.99
HDAC3-201ENST00000305264 PRH1P02810 166 aa21.23■□□□□ 0.99
HDAC3-201ENST00000305264 PROK1P58294 105 aa21.23■□□□□ 0.99
HDAC3-201ENST00000305264 CENPVQ7Z7K6 275 aaPredicted RBP21.23■□□□□ 0.99
HDAC3-201ENST00000305264 PPP1R1CQ8WVI7 109 aa21.23■□□□□ 0.99
HDAC3-201ENST00000305264 C19orf24Q9BVV8 132 aa21.23■□□□□ 0.99
HDAC3-201ENST00000305264 HAX1O00165 279 aa21.23■□□□□ 0.99
HDAC3-201ENST00000305264 CRYGCP07315 174 aa21.23■□□□□ 0.99
HDAC3-201ENST00000305264 MRPL41Q8IXM3 137 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms