RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 SLC17A3O00476 420 aa16.22■□□□□ 0.19
TSR1-201ENST00000301364 SS18L1O75177 396 aaPredicted RBP16.22■□□□□ 0.19
TSR1-201ENST00000301364 HLA-DRB1P01911 266 aa16.22■□□□□ 0.19
TSR1-201ENST00000301364 RNF115Q9Y4L5 304 aa16.22■□□□□ 0.19
TSR1-201ENST00000301364 IGHV1-69-2A0A0G2JMI3 117 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 LYL1P12980 280 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 CD40P25942 277 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 PLAURQ03405 335 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 LINC00587B1AMM8 73 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 HIST1H2BKO60814 126 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 HIST1H2BJP06899 126 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 HIST1H2BOP23527 126 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 HIST1H2BBP33778 126 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 HIST1H2BDP58876 126 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 HIST1H2BCP62807 126 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 HIST2H2BEQ16778 126 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.21■□□□□ 0.19
TSR1-201ENST00000301364 OR10AG1Q8NH19 301 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 HIST1H2BHQ93079 126 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 HIST1H2BNQ99877 126 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 HIST1H2BMQ99879 126 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 NBEAP1P0C6P0 100 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 CEACAM1P13688 526 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 NMUP48645 174 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 NLRC5Q86WI3 1866 aa16.21■□□□□ 0.19
TSR1-201ENST00000301364 DPRXA6NFQ7 191 aa16.21■□□□□ 0.18
TSR1-201ENST00000301364 TAS2R60P59551 318 aa16.21■□□□□ 0.18
TSR1-201ENST00000301364 TMEM42Q69YG0 159 aa16.21■□□□□ 0.18
TSR1-201ENST00000301364 J3KRW8 73 aa16.2■□□□□ 0.18
TSR1-201ENST00000301364 NAPSAO96009 420 aa16.2■□□□□ 0.18
TSR1-201ENST00000301364 SOD3P08294 240 aa16.2■□□□□ 0.18
TSR1-201ENST00000301364 MED12Q93074 2177 aa16.2■□□□□ 0.18
TSR1-201ENST00000301364 A0A1B0GV90 55 aa16.2■□□□□ 0.18
TSR1-201ENST00000301364 OTX1P32242 354 aaPredicted RBP16.2■□□□□ 0.18
TSR1-201ENST00000301364 TCF20Q9UGU0 1960 aaKnown RBP16.2■□□□□ 0.18
TSR1-201ENST00000301364 B9A039 149 aa16.2■□□□□ 0.18
TSR1-201ENST00000301364 RAB9AP51151 201 aa16.2■□□□□ 0.18
TSR1-201ENST00000301364 SRSF9Q13242 221 aaKnown RBP eCLIP16.2■□□□□ 0.18
TSR1-201ENST00000301364 RNASEH2CQ8TDP1 164 aaKnown RBP16.2■□□□□ 0.18
TSR1-201ENST00000301364 ZCCHC14Q8WYQ9 949 aaKnown RBP16.2■□□□□ 0.18
TSR1-201ENST00000301364 C5orf52A6NGY3 159 aa16.2■□□□□ 0.18
TSR1-201ENST00000301364 FAM90A9PA6NNJ1 464 aa16.2■□□□□ 0.18
TSR1-201ENST00000301364 LIPFP07098 398 aa16.2■□□□□ 0.18
TSR1-201ENST00000301364 MGPP08493 103 aa16.2■□□□□ 0.18
TSR1-201ENST00000301364 WDR82Q6UXN9 313 aa16.2■□□□□ 0.18
TSR1-201ENST00000301364 RBPMS2Q6ZRY4 209 aaKnown RBP16.2■□□□□ 0.18
TSR1-201ENST00000301364 PRDM6Q9NQX0 595 aa16.2■□□□□ 0.18
TSR1-201ENST00000301364 BTF3P20290 206 aaKnown RBP16.19■□□□□ 0.18
TSR1-201ENST00000301364 GOLT1AQ6ZVE7 132 aa16.19■□□□□ 0.18
TSR1-201ENST00000301364 C1QL4Q86Z23 238 aa16.19■□□□□ 0.18
TSR1-201ENST00000301364 METTL26Q96S19 204 aa16.19■□□□□ 0.18
TSR1-201ENST00000301364 TRBV24-1A0A075B6N3 115 aa16.19■□□□□ 0.18
TSR1-201ENST00000301364 IGHV3-48P01763 117 aa16.19■□□□□ 0.18
TSR1-201ENST00000301364 NMSQ5H8A3 153 aa16.19■□□□□ 0.18
TSR1-201ENST00000301364 FAM216BQ8N7L0 139 aa16.19■□□□□ 0.18
TSR1-201ENST00000301364 SGK494Q96LW2 274 aa16.19■□□□□ 0.18
TSR1-201ENST00000301364 C9orf172C9J069 976 aa16.19■□□□□ 0.18
TSR1-201ENST00000301364 TBR1Q16650 682 aa16.19■□□□□ 0.18
TSR1-201ENST00000301364 TMEM106BQ9NUM4 274 aa16.19■□□□□ 0.18
TSR1-201ENST00000301364 WDR83OSQ9Y284 106 aa16.19■□□□□ 0.18
TSR1-201ENST00000301364 LINC00312Q9Y6C7 94 aa16.19■□□□□ 0.18
TSR1-201ENST00000301364 MOSP00540 346 aa16.19■□□□□ 0.18
TSR1-201ENST00000301364 ID1P41134 155 aa16.19■□□□□ 0.18
TSR1-201ENST00000301364 ACSF3Q4G176 576 aaPredicted RBP16.19■□□□□ 0.18
TSR1-201ENST00000301364 RABAC1Q9UI14 185 aa16.19■□□□□ 0.18
TSR1-201ENST00000301364 PEX7O00628 323 aa16.18■□□□□ 0.18
TSR1-201ENST00000301364 RAMP3O60896 148 aa16.18■□□□□ 0.18
TSR1-201ENST00000301364 MORN2Q502X0 79 aa16.18■□□□□ 0.18
TSR1-201ENST00000301364 PRR7Q8TB68 274 aa16.18■□□□□ 0.18
TSR1-201ENST00000301364 CD55P08174 381 aa16.18■□□□□ 0.18
TSR1-201ENST00000301364 TCF24Q7RTU0 167 aa16.18■□□□□ 0.18
TSR1-201ENST00000301364 TMEM171Q8WVE6 324 aa16.18■□□□□ 0.18
TSR1-201ENST00000301364 PINLYPA6NC86 204 aa16.18■□□□□ 0.18
TSR1-201ENST00000301364 SH2D7A6NKC9 451 aaPredicted RBP16.18■□□□□ 0.18
TSR1-201ENST00000301364 CIDEAO60543 219 aa16.18■□□□□ 0.18
TSR1-201ENST00000301364 DGAT2L7PQ6IED9 249 aa16.18■□□□□ 0.18
TSR1-201ENST00000301364 DPF1Q92782 380 aa16.18■□□□□ 0.18
TSR1-201ENST00000301364 MAP1LC3AQ9H492 121 aa16.18■□□□□ 0.18
TSR1-201ENST00000301364 IGKV3-7A0A075B6H7 116 aa16.18■□□□□ 0.18
TSR1-201ENST00000301364 TMEM208Q9BTX3 173 aa16.18■□□□□ 0.18
TSR1-201ENST00000301364 CLDN16Q9Y5I7 305 aa16.18■□□□□ 0.18
TSR1-201ENST00000301364 C15orf61A6NNL5 157 aa16.17■□□□□ 0.18
TSR1-201ENST00000301364 NPIPB11E5RHQ5 1161 aa16.17■□□□□ 0.18
TSR1-201ENST00000301364 UNQ5815/PRO19632Q6UWF5 114 aa16.17■□□□□ 0.18
TSR1-201ENST00000301364 MIR17HGQ75NE6 70 aa16.17■□□□□ 0.18
TSR1-201ENST00000301364 C9orf106Q8NAJ2 232 aa16.17■□□□□ 0.18
TSR1-201ENST00000301364 IMMP2LQ96T52 175 aa16.17■□□□□ 0.18
TSR1-201ENST00000301364 SOX21Q9Y651 276 aaPredicted RBP16.17■□□□□ 0.18
TSR1-201ENST00000301364 FAM201AQ5SY85 155 aa16.17■□□□□ 0.18
TSR1-201ENST00000301364 PEAR1Q5VY43 1037 aaPredicted RBP16.17■□□□□ 0.18
TSR1-201ENST00000301364 RNF144BQ7Z419 303 aa16.17■□□□□ 0.18
TSR1-201ENST00000301364 H3BTX0 84 aa16.17■□□□□ 0.18
TSR1-201ENST00000301364 FAM27E3Q08E93 113 aa16.17■□□□□ 0.18
TSR1-201ENST00000301364 SAPCD1Q5SSQ6 148 aa16.17■□□□□ 0.18
TSR1-201ENST00000301364 ARF6P62330 175 aa16.17■□□□□ 0.18
TSR1-201ENST00000301364 FOXL2NBQ6ZUU3 175 aa16.17■□□□□ 0.18
TSR1-201ENST00000301364 TMEM70Q9BUB7 260 aa16.17■□□□□ 0.18
TSR1-201ENST00000301364 MDC1Q14676 2089 aaKnown RBP16.17■□□□□ 0.18
TSR1-201ENST00000301364 UPK2O00526 184 aa16.16■□□□□ 0.18
TSR1-201ENST00000301364 SNCGO76070 127 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms