RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 GFI1BQ5VTD9 330 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 C3orf56Q8N813 242 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 LEAP2Q969E1 77 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 NPIPB11E5RHQ5 1161 aa10.33□□□□□ -0.76
PCF11-201ENST00000298281 SPINT1O43278 529 aa10.33□□□□□ -0.76
PCF11-201ENST00000298281 LINC00614P0C842 121 aa10.33□□□□□ -0.76
PCF11-201ENST00000298281 ZNF625Q96I27 306 aaPredicted RBP10.33□□□□□ -0.76
PCF11-201ENST00000298281 RBM38Q9H0Z9 239 aaKnown RBP10.33□□□□□ -0.76
PCF11-201ENST00000298281 DLX4Q92988 240 aaPredicted RBP10.33□□□□□ -0.76
PCF11-201ENST00000298281 GPR132Q9UNW8 380 aa10.33□□□□□ -0.76
PCF11-201ENST00000298281 PLXNB2O15031 1838 aa10.33□□□□□ -0.76
PCF11-201ENST00000298281 KIAA1644Q3SXP7 199 aa10.33□□□□□ -0.76
PCF11-201ENST00000298281 SSBP4Q9BWG4 385 aaPredicted RBP10.33□□□□□ -0.76
PCF11-201ENST00000298281 G6PC2Q9NQR9 355 aa10.33□□□□□ -0.76
PCF11-201ENST00000298281 C9orf62Q8N4C0 152 aa10.33□□□□□ -0.76
PCF11-201ENST00000298281 ST6GALNAC3Q8NDV1 305 aa10.33□□□□□ -0.76
PCF11-201ENST00000298281 ZNF721Q8TF20 911 aa10.33□□□□□ -0.76
PCF11-201ENST00000298281 GGTLC1Q9BX51 225 aa10.33□□□□□ -0.76
PCF11-201ENST00000298281 TRBV5-3A0A0A0MS03 114 aa10.33□□□□□ -0.76
PCF11-201ENST00000298281 ZIC3O60481 467 aa10.33□□□□□ -0.76
PCF11-201ENST00000298281 C19orf67A6NJJ6 358 aa10.33□□□□□ -0.76
PCF11-201ENST00000298281 ITLN1Q8WWA0 313 aa10.33□□□□□ -0.76
PCF11-201ENST00000298281 KCNS1Q96KK3 526 aa10.33□□□□□ -0.76
PCF11-201ENST00000298281 ZNF385AQ96PM9 386 aaKnown RBP10.33□□□□□ -0.76
PCF11-201ENST00000298281 RGPD4Q7Z3J3 1758 aa10.33□□□□□ -0.76
PCF11-201ENST00000298281 ITGB1BP1O14713 200 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 CXCL3P19876 107 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 WNT2BQ93097 391 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 TRAV24A0A0B4J272 114 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 SRIP30626 198 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 LEPP41159 167 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 RIPPLY3P57055 190 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 PKIBQ9C010 78 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 METRNQ9UJH8 293 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 TNRC6CQ9HCJ0 1690 aaKnown RBP10.32□□□□□ -0.76
PCF11-201ENST00000298281 FHITP49789 147 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 SDHCQ99643 169 aaPredicted RBP10.32□□□□□ -0.76
PCF11-201ENST00000298281 SSBP3Q9BWW4 388 aaPredicted RBP10.32□□□□□ -0.76
PCF11-201ENST00000298281 GREB1Q4ZG55 1949 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 A0A1W2PPV9 198 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 IL6RP08887 468 aaPredicted RBP10.32□□□□□ -0.76
PCF11-201ENST00000298281 RPL35AP18077 110 aaKnown RBP10.32□□□□□ -0.76
PCF11-201ENST00000298281 RIPPLY2Q5TAB7 128 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 STPG1Q5TH74 334 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 CLEC19AQ6UXS0 136 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 OR11H4Q8NGC9 324 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 TMEM45BQ96B21 275 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 RHOVQ96L33 236 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 PEF1Q9UBV8 284 aaKnown RBP10.32□□□□□ -0.76
PCF11-201ENST00000298281 LOC285556D6RIA3 1793 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 PLNP26678 52 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 IRF3Q14653 427 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 ICAM4Q14773 271 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 LINC00305Q7Z4B0 112 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 PNKDQ8N490 385 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 RPRMQ9NS64 109 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 ARAP2Q8WZ64 1704 aa10.32□□□□□ -0.76
PCF11-201ENST00000298281 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.31□□□□□ -0.76
PCF11-201ENST00000298281 PRB3Q04118 309 aaPredicted RBP10.31□□□□□ -0.76
PCF11-201ENST00000298281 SPNS2Q8IVW8 549 aa10.31□□□□□ -0.76
PCF11-201ENST00000298281 OR13A1Q8NGR1 328 aa10.31□□□□□ -0.76
PCF11-201ENST00000298281 NAT1P18440 290 aa10.31□□□□□ -0.76
PCF11-201ENST00000298281 ZNF385CQ66K41 422 aaPredicted RBP10.31□□□□□ -0.76
PCF11-201ENST00000298281 IDI2-AS1Q9NZ38 188 aa10.31□□□□□ -0.76
PCF11-201ENST00000298281 SAXO1Q8IYX7 474 aa10.31□□□□□ -0.76
PCF11-201ENST00000298281 DERL1Q9BUN8 251 aa10.31□□□□□ -0.76
PCF11-201ENST00000298281 HSPB1P04792 205 aaKnown RBP10.31□□□□□ -0.76
PCF11-201ENST00000298281 WFDC12Q8WWY7 111 aa10.31□□□□□ -0.76
PCF11-201ENST00000298281 NPCDR1Q9BY65 106 aa10.31□□□□□ -0.76
PCF11-201ENST00000298281 C7orf69Q9H7B7 122 aa10.31□□□□□ -0.76
PCF11-201ENST00000298281 KIAA1551Q9HCM1 1747 aa10.31□□□□□ -0.76
PCF11-201ENST00000298281 ESDP10768 282 aa10.31□□□□□ -0.76
PCF11-201ENST00000298281 MDS2Q8NDY4 140 aa10.31□□□□□ -0.76
PCF11-201ENST00000298281 FAM57AQ8TBR7 257 aa10.31□□□□□ -0.76
PCF11-201ENST00000298281 M0R2P5 195 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 GPR183P32249 361 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 GPR146Q96CH1 333 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 ZNF488Q96MN9 340 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 TMEM222Q9H0R3 208 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 TSC2P49815 1807 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 LRP5O75197 1615 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 A0A0J9YW62 118 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 ZNF501Q96CX3 271 aaPredicted RBP10.3□□□□□ -0.76
PCF11-201ENST00000298281 MIXL1Q9H2W2 232 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 ST6GALNAC2Q9UJ37 374 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 BRWD3Q6RI45 1802 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 PSG4Q00888 419 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 MRPS18BQ9Y676 258 aaKnown RBP10.3□□□□□ -0.76
PCF11-201ENST00000298281 FREM1Q5H8C1 2179 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 BCORQ6W2J9 1755 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 A0A1W2PPC1 479 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 FOXS1O43638 330 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 VENTXO95231 258 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 CD28P10747 220 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 IGHV1-69-2A0A0G2JMI3 117 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 PAX1P15863 534 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 OR11H7Q8NGC8 314 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 HRKO00198 91 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 PTP4A3O75365 173 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 PTGDSP41222 190 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms