RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 IGKV1-33P01594 117 aa18.32■□□□□ 0.52
PTX3-201ENST00000295927 CD24P25063 80 aa18.32■□□□□ 0.52
PTX3-201ENST00000295927 F2RL1P55085 397 aa18.32■□□□□ 0.52
PTX3-201ENST00000295927 PRSS8Q16651 343 aa18.32■□□□□ 0.52
PTX3-201ENST00000295927 POLQO75417 2590 aa18.32■□□□□ 0.52
PTX3-201ENST00000295927 MMD2Q8IY49 270 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 AJUBAQ96IF1 538 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 RSG1Q9BU20 258 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 PLXNB1O43157 2135 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 CENPVL3A0A0U1RRI6 287 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 MFSD2BA6NFX1 497 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 PRSS46E5RG02 174 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 MOSP00540 346 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 IFNA4P05014 189 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 MSMBP08118 114 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 SAA4P35542 130 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 HNF4GQ14541 408 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 VWC2Q2TAL6 325 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 DEFB113Q30KQ7 82 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 PXDC1Q5TGL8 231 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 TAF15Q92804 592 aaKnown RBP eCLIP18.31■□□□□ 0.52
PTX3-201ENST00000295927 MALSU1Q96EH3 234 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 FBXL15Q9H469 300 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 RAB5CP51148 216 aa18.3■□□□□ 0.52
PTX3-201ENST00000295927 BLOC1S1P78537 153 aa18.3■□□□□ 0.52
PTX3-201ENST00000295927 Q6ZRG5 221 aa18.3■□□□□ 0.52
PTX3-201ENST00000295927 PPP1R27Q86WC6 154 aa18.3■□□□□ 0.52
PTX3-201ENST00000295927 EAF1Q96JC9 268 aaPredicted RBP18.3■□□□□ 0.52
PTX3-201ENST00000295927 CSMD2Q7Z408 3487 aa18.3■□□□□ 0.52
PTX3-201ENST00000295927 A0A1B0GW64 132 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 SNRNP70P08621 437 aaKnown RBP18.29■□□□□ 0.52
PTX3-201ENST00000295927 AANATQ16613 207 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 HIST2H2BCQ6DN03 193 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 PARP11Q9NR21 331 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 A0A096LNT2 108 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 A0A1W2PN81 502 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 INS-IGF2F8WCM5 200 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 NPFFO15130 113 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 PRH1P02810 166 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 CHRNA7P36544 502 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 FHITP49789 147 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 HES1Q14469 280 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 MMDQ15546 238 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 TNXAQ16473 311 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 BSXQ3C1V8 233 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 FBLN7Q53RD9 439 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 FBXO7Q9Y3I1 522 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 ANKRD34BA5PLL1 514 aa18.28■□□□□ 0.52
PTX3-201ENST00000295927 B4DSR2 109 aa18.28■□□□□ 0.52
PTX3-201ENST00000295927 UMAD1C9J7I0 102 aa18.28■□□□□ 0.52
PTX3-201ENST00000295927 CAMLGP49069 296 aa18.28■□□□□ 0.52
PTX3-201ENST00000295927 ERHP84090 104 aaKnown RBP18.28■□□□□ 0.52
PTX3-201ENST00000295927 PIP4P2Q8N4L2 257 aa18.28■□□□□ 0.52
PTX3-201ENST00000295927 OR2T10Q8NGZ9 312 aa18.28■□□□□ 0.52
PTX3-201ENST00000295927 GGACTQ9BVM4 153 aa18.28■□□□□ 0.52
PTX3-201ENST00000295927 TRIM77I1YAP6 450 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 ACTL6BO94805 426 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 RNASE2P10153 161 aaKnown RBP18.27■□□□□ 0.52
PTX3-201ENST00000295927 MAS1LP35410 378 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 SNCAP37840 140 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 WT1-ASQ06250 92 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 TUSC1Q2TAM9 212 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 LRRC75A-AS1Q8N1F1 130 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 PSMG3Q9BT73 122 aaPredicted RBP18.27■□□□□ 0.52
PTX3-201ENST00000295927 HRH4Q9H3N8 390 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 ABCA12Q86UK0 2595 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 NBR2O15453 112 aa18.27■□□□□ 0.51
PTX3-201ENST00000295927 MDKP21741 143 aaPredicted RBP18.27■□□□□ 0.51
PTX3-201ENST00000295927 FGF7P21781 194 aa18.27■□□□□ 0.51
PTX3-201ENST00000295927 RPL27AP46776 148 aaKnown RBP18.27■□□□□ 0.51
PTX3-201ENST00000295927 ATP5IP56385 69 aaPredicted RBP18.27■□□□□ 0.51
PTX3-201ENST00000295927 DLK1P80370 383 aa18.27■□□□□ 0.51
PTX3-201ENST00000295927 PLGLAQ15195 96 aa18.27■□□□□ 0.51
PTX3-201ENST00000295927 C2orf83Q53S99 150 aa18.27■□□□□ 0.51
PTX3-201ENST00000295927 HSD17B13Q7Z5P4 300 aaPredicted RBP18.27■□□□□ 0.51
PTX3-201ENST00000295927 NPBQ8NG41 125 aa18.27■□□□□ 0.51
PTX3-201ENST00000295927 FCN1O00602 326 aa18.26■□□□□ 0.51
PTX3-201ENST00000295927 COMPP49747 757 aaPredicted RBP18.26■□□□□ 0.51
PTX3-201ENST00000295927 GNB1P62873 340 aa18.26■□□□□ 0.51
PTX3-201ENST00000295927 BTNL8Q6UX41 500 aa18.26■□□□□ 0.51
PTX3-201ENST00000295927 FAM213BQ8TBF2 198 aa18.26■□□□□ 0.51
PTX3-201ENST00000295927 C1orf159Q96HA4 380 aa18.26■□□□□ 0.51
PTX3-201ENST00000295927 MAP1AP78559 2803 aaPredicted RBP18.26■□□□□ 0.51
PTX3-201ENST00000295927 HELZ2Q9BYK8 2649 aaKnown RBP18.26■□□□□ 0.51
PTX3-201ENST00000295927 NDUFA3O95167 84 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 ZNF616Q08AN1 781 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 EBI3Q14213 229 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 AKR1C8PQ5T2L2 129 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 MARC2Q969Z3 335 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 KIAA1456Q9P272 454 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 IGHV1-69DA0A0B4J2H0 117 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 IGHV1-69P01742 117 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 EIF4E3Q8N5X7 224 aaKnown RBP18.25■□□□□ 0.51
PTX3-201ENST00000295927 HIF1ANQ9NWT6 349 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 WDR83OSQ9Y284 106 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 TIMM9Q9Y5J7 89 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 IGHV3OR16-10A0A075B7F0 116 aa18.24■□□□□ 0.51
PTX3-201ENST00000295927 SMCO3A2RU48 225 aa18.24■□□□□ 0.51
PTX3-201ENST00000295927 OR13C7P0DN81 318 aa18.24■□□□□ 0.51
PTX3-201ENST00000295927 SSBP2P81877 361 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms