RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 IL6RP08887 468 aaPredicted RBP5.07□□□□□ -1.6
CD44-204ENST00000279452 OR8U8P0C7N1 319 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 OR13C7P0DN81 318 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 UCP1P25874 307 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 PSMB6P28072 239 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 HOXA1P49639 335 aaPredicted RBP5.07□□□□□ -1.6
CD44-204ENST00000279452 SLURP1P55000 103 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 DHODHQ02127 395 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 RBMS2Q15434 407 aaKnown RBP5.07□□□□□ -1.6
CD44-204ENST00000279452 OXLD1Q5BKU9 147 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 THOC7Q6I9Y2 204 aaKnown RBP5.07□□□□□ -1.6
CD44-204ENST00000279452 FAM223AQ8IWN6 122 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 CENPSQ8N2Z9 138 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 TTC9CQ8N5M4 171 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 OR1L8Q8NGR8 309 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 OR5B3Q8NH48 314 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 MYOZ3Q8TDC0 251 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 DEDD2Q8WXF8 326 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 S100ZQ8WXG8 99 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 RBPMSQ93062 196 aaKnown RBP5.07□□□□□ -1.6
CD44-204ENST00000279452 LSM10Q969L4 123 aaKnown RBP5.07□□□□□ -1.6
CD44-204ENST00000279452 RCC1LQ96I51 464 aaKnown RBP5.07□□□□□ -1.6
CD44-204ENST00000279452 SEC22AQ96IW7 307 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 TMEM56Q96MV1 263 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 SLC25A21Q9BQT8 299 aaPredicted RBP5.07□□□□□ -1.6
CD44-204ENST00000279452 TMEM222Q9H0R3 208 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 PLEKHA3Q9HB20 300 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 ENY2Q9NPA8 101 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 AKIP1Q9NQ31 210 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 FAM212BQ9NTI7 297 aaPredicted RBP5.07□□□□□ -1.6
CD44-204ENST00000279452 FKBP11Q9NYL4 201 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 FBXL7Q9UJT9 491 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 S4R3C0 116 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 IGHV3-21A0A0B4J1V1 117 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 A0A1B0GW64 132 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 IGLC7A0M8Q6 106 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 DBX1A6NMT0 343 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 SEC14L6B5MCN3 397 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 I3L521 148 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 DUS4LO95620 317 aaKnown RBP5.06□□□□□ -1.6
CD44-204ENST00000279452 IGKV1-5P01602 117 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 HSPB1P04792 205 aaKnown RBP5.06□□□□□ -1.6
CD44-204ENST00000279452 FGF2P09038 288 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 HIST1H1BP16401 226 aaKnown RBP5.06□□□□□ -1.6
CD44-204ENST00000279452 HOXD3P31249 432 aaPredicted RBP5.06□□□□□ -1.6
CD44-204ENST00000279452 SRPXP78539 464 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 DEFA6Q01524 100 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 ZNF846Q147U1 533 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 RPEL1Q2QD12 228 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 C15orf32Q32M92 178 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 SLC25A24Q6NUK1 477 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 HSD17B13Q7Z5P4 300 aaPredicted RBP5.06□□□□□ -1.6
CD44-204ENST00000279452 SELENOHQ8IZQ5 122 aaKnown RBP5.06□□□□□ -1.6
CD44-204ENST00000279452 LGI3Q8N145 548 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 UBAC2Q8NBM4 344 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 NECAP1Q8NC96 275 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 GLYATL2Q8WU03 294 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 TMEM230Q96A57 120 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 EEF1AKMT3Q96AZ1 226 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 PINX1Q96BK5 328 aaKnown RBP5.06□□□□□ -1.6
CD44-204ENST00000279452 MISP3Q96FF7 219 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 USMG5Q96IX5 58 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 P2RX4Q99571 388 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 SDHCQ99643 169 aaPredicted RBP5.06□□□□□ -1.6
CD44-204ENST00000279452 C7orf50Q9BRJ6 194 aaKnown RBP5.06□□□□□ -1.6
CD44-204ENST00000279452 MCRIP2Q9BUT9 160 aaKnown RBP5.06□□□□□ -1.6
CD44-204ENST00000279452 CCDC32Q9BV29 185 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 GPR61Q9BZJ8 451 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 WDR12Q9GZL7 423 aaKnown RBP5.06□□□□□ -1.6
CD44-204ENST00000279452 RANGRFQ9HD47 186 aaPredicted RBP5.06□□□□□ -1.6
CD44-204ENST00000279452 THYN1Q9P016 225 aa5.06□□□□□ -1.6
CD44-204ENST00000279452 A0A0G2JRQ6 117 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 CGB1A6NKQ9 187 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 CEBPZOSA8MTT3 80 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 OVOL1O14753 267 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 ST8SIA3O43173 380 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 LYRM1O43325 122 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 SAP30O75446 220 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 NDUFB6O95139 128 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 NDUFB8O95169 186 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 CDS2O95674 445 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 TRBV12-3P01733 135 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 HLA-AP01891 365 aaKnown RBP5.05□□□□□ -1.6
CD44-204ENST00000279452 PRB2P02812 416 aaPredicted RBP5.05□□□□□ -1.6
CD44-204ENST00000279452 CTRB1P17538 263 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 ZP3P21754 424 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 SNCAP37840 140 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 ERHP84090 104 aaKnown RBP5.05□□□□□ -1.6
CD44-204ENST00000279452 PRCDQ00LT1 54 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 RUNX1Q01196 453 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 WT1-ASQ06250 92 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 PPP1R1AQ13522 171 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 KIAA0141Q14154 515 aaPredicted RBP5.05□□□□□ -1.6
CD44-204ENST00000279452 C4orf46Q504U0 113 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 TMEM128Q5BJH2 165 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 SAMD5Q5TGI4 173 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 CTRB2Q6GPI1 263 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 FAM219AQ8IW50 185 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 OR1S1Q8NH92 325 aa5.05□□□□□ -1.6
CD44-204ENST00000279452 LHFPL5Q8TAF8 219 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms