RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 CD81P60033 236 aa10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 RAB5BP61020 215 aa10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 RPL8P62917 257 aaKnown RBP10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 FAM24BQ8N5W8 94 aa10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 TNFRSF14Q92956 283 aa10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 SIRT7Q9NRC8 400 aa10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 ZNF727A8MUV8 499 aa10.5□□□□□ -0.73
SPTLC1-201ENST00000262554 C1orf196B1AJZ1 125 aa10.5□□□□□ -0.73
SPTLC1-201ENST00000262554 TMEM250H0YL14 139 aa10.5□□□□□ -0.73
SPTLC1-201ENST00000262554 YIF1AO95070 293 aa10.5□□□□□ -0.73
SPTLC1-201ENST00000262554 RAB5AP20339 215 aa10.5□□□□□ -0.73
SPTLC1-201ENST00000262554 PRRX1P54821 245 aa10.5□□□□□ -0.73
SPTLC1-201ENST00000262554 DIAPH2-AS1Q14236 149 aa10.5□□□□□ -0.73
SPTLC1-201ENST00000262554 TMEM249Q2WGJ8 235 aa10.5□□□□□ -0.73
SPTLC1-201ENST00000262554 C2orf83Q53S99 150 aa10.5□□□□□ -0.73
SPTLC1-201ENST00000262554 GCSAMLQ5JQS6 135 aa10.5□□□□□ -0.73
SPTLC1-201ENST00000262554 MIC13Q5XKP0 118 aa10.5□□□□□ -0.73
SPTLC1-201ENST00000262554 ZNF841Q6ZN19 808 aa10.5□□□□□ -0.73
SPTLC1-201ENST00000262554 C11orf42Q8N5U0 333 aa10.5□□□□□ -0.73
SPTLC1-201ENST00000262554 OR1L8Q8NGR8 309 aa10.5□□□□□ -0.73
SPTLC1-201ENST00000262554 TMEM167AQ8TBQ9 72 aa10.5□□□□□ -0.73
SPTLC1-201ENST00000262554 ADGRG4Q8IZF6 3080 aa10.5□□□□□ -0.73
SPTLC1-201ENST00000262554 CXorf65A6NEN9 183 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 DEFA4P12838 97 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 MAS1LP35410 378 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 B2MP61769 119 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 LY6DQ14210 128 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 OR8B3Q8NGG8 313 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 OR8B2Q96RD0 313 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 SAV1Q9H4B6 383 aaPredicted RBP10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 PRORYQ9H606 182 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 PATZ1Q9HBE1 687 aaKnown RBP10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 CBLN4Q9NTU7 201 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 MIOXQ9UGB7 285 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 PAGE4O60829 102 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 RBP4P02753 201 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 ERHP84090 104 aaKnown RBP10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 VMA21Q3ZAQ7 101 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 WDR25Q64LD2 544 aaPredicted RBP10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 ZFP82Q8N141 532 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 OR4F5Q8NH21 305 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 GATAD1Q8WUU5 269 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 SSMEM1Q8WWF3 244 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 C1orf159Q96HA4 380 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 OR4F4Q96R69 305 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 SMIM7Q9BQ49 75 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 SDF2L1Q9HCN8 221 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 BIN3Q9NQY0 253 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 NDUFA4L2Q9NRX3 87 aa10.49□□□□□ -0.73
SPTLC1-201ENST00000262554 SPTA1P02549 2419 aa10.48□□□□□ -0.73
SPTLC1-201ENST00000262554 IGHV2-26A0A0B4J1V2 119 aa10.48□□□□□ -0.73
SPTLC1-201ENST00000262554 PPIAL4CA0A0B4J2A2 164 aa10.48□□□□□ -0.73
SPTLC1-201ENST00000262554 A0A1W2PN81 502 aa10.48□□□□□ -0.73
SPTLC1-201ENST00000262554 hCG_1809904A0A1W2PP81 198 aa10.48□□□□□ -0.73
SPTLC1-201ENST00000262554 A0A1W2PR64 198 aa10.48□□□□□ -0.73
SPTLC1-201ENST00000262554 A0A1W2PRV1 198 aa10.48□□□□□ -0.73
SPTLC1-201ENST00000262554 PPIAL4GP0DN37 164 aa10.48□□□□□ -0.73
SPTLC1-201ENST00000262554 CHRNA7P36544 502 aa10.48□□□□□ -0.73
SPTLC1-201ENST00000262554 RPL29P47914 159 aaKnown RBP10.48□□□□□ -0.73
SPTLC1-201ENST00000262554 BSXQ3C1V8 233 aa10.48□□□□□ -0.73
SPTLC1-201ENST00000262554 UNQ6494/PRO21346Q6UXR6 183 aa10.48□□□□□ -0.73
SPTLC1-201ENST00000262554 STPG3Q8N7X2 389 aa10.48□□□□□ -0.73
SPTLC1-201ENST00000262554 TIMD4Q96H15 378 aa10.48□□□□□ -0.73
SPTLC1-201ENST00000262554 NAT8Q9UHE5 227 aa10.48□□□□□ -0.73
SPTLC1-201ENST00000262554 KALRNO60229 2985 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 INS-IGF2F8WCM5 200 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 ENSAO43768 121 aaKnown RBP10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 TSPAN9O75954 239 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 CXorf1O96002 111 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 IGLV2-23P01705 113 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 RNASE2P10153 161 aaKnown RBP10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 LGALS7P47929 136 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 HABP2Q14520 560 aaPredicted RBP10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 TMEM241Q24JQ0 296 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 ZNF674Q2M3X9 581 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 HLA-DRB5Q30154 266 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 TMEM144Q7Z5S9 345 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 OR10W1Q8NGF6 305 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 C8orf46Q8TAG6 207 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 NEU4Q8WWR8 484 aaPredicted RBP10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 MALSU1Q96EH3 234 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 YPEL4Q96NS1 127 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 CLEC7AQ9BXN2 247 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 TNCP24821 2201 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 ANKHD1Q8IWZ3 2542 aaKnown RBP10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 C11orf94C9JXX5 98 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 DLL1O00548 723 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 IGFBP2P18065 325 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 RHOBP62745 196 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 CYP2G1PQ6ZSU1 146 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 C2CD4CQ8TF44 421 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 RPUSD4Q96CM3 377 aaKnown RBP10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 TMEM242Q9NWH2 141 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 PRELID1Q9Y255 219 aa10.47□□□□□ -0.73
SPTLC1-201ENST00000262554 SPTBN4Q9H254 2564 aa10.46□□□□□ -0.73
SPTLC1-201ENST00000262554 PDE6DO43924 150 aa10.46□□□□□ -0.74
SPTLC1-201ENST00000262554 IGLV1-47P01700 117 aa10.46□□□□□ -0.74
SPTLC1-201ENST00000262554 STAG3L2P0CL84 134 aa10.46□□□□□ -0.74
SPTLC1-201ENST00000262554 STAG3L3P0CL85 134 aa10.46□□□□□ -0.74
SPTLC1-201ENST00000262554 ARL14EPLP0DKL9 152 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms